RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 EYA2O00167 538 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 SLITRK5O94991 958 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 APOL3O95236 402 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 GSNP06396 782 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 POLBP06746 335 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 GLI1P08151 1106 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 ZBTB48P10074 688 aaPredicted RBP3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 COL6A2P12110 1019 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 CAPN3P20807 821 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 TPP2P29144 1249 aaPredicted RBP3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 KRT9P35527 623 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 ADD2P35612 726 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 CTSKP43235 329 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 RXRGP48443 463 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 CASP5P51878 434 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 CDK17Q00537 523 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 POLD3Q15054 466 aaPredicted RBP3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 FSCN1Q16658 493 aaKnown RBP3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 PRR16Q569H4 304 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 INTS11Q5TA45 600 aaKnown RBP3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 CCDC30Q5VVM6 783 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 ZKSCAN2Q63HK3 967 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 MBLAC2Q68D91 279 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 RETSATQ6NUM9 610 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 PGBD2Q6P3X8 592 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 APOA5Q6Q788 366 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 CYP26C1Q6V0L0 522 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 ARHGAP36Q6ZRI8 547 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 GET4Q7L5D6 327 aaPredicted RBP3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 HEATR4Q86WZ0 1026 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 CXorf67Q86X51 503 aaPredicted RBP3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 CPNE8Q86YQ8 564 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 FAM181AQ8N9Y4 354 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 ASB11Q8WXH4 323 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 HDAC2Q92769 488 aaKnown RBP3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 ARL8AQ96BM9 186 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 COA7Q96BR5 231 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 LIN37Q96GY3 246 aaPredicted RBP3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 FCRL3Q96P31 734 aaPredicted RBP3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 GSX1Q9H4S2 264 aaPredicted RBP3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 ZNF277Q9NRM2 450 aaPredicted RBP3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 RASSF1Q9NS23 344 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 KCNG1Q9UIX4 513 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 NR2E3Q9Y5X4 410 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 RPGRIP1LQ68CZ1 1315 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 TSPY2A6NKD2 308 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 ADAMTS3O15072 1205 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 DYNC1LI2O43237 492 aaPredicted RBP3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 ORC4O43929 436 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 TIPRLO75663 272 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 CBX7O95931 251 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 CEACAM5P06731 702 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 GSTM1P09488 218 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 INHBBP09529 407 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 C1QTNF9P0C862 333 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 DHRS4L1P0CG22 281 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 TSPY3P0CV98 308 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 TSPY8P0CW00 308 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 HARSP12081 509 aaKnown RBP3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 PAMP19021 973 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 KRT20P35900 424 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 BCL6P41182 706 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 SLC5A3P53794 718 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 BCAR1P56945 870 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 TSPY1Q01534 308 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 POSTNQ15063 836 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 TIGD6Q17RP2 521 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 GPATCH4Q5T3I0 446 aaKnown RBP3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 KLHDC7AQ5VTJ3 777 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 MBNL2Q5VZF2 373 aaKnown RBP3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 ITPRIPL1Q6GPH6 555 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 HIBCHQ6NVY1 386 aaPredicted RBP3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 C4orf50Q6ZRC1 276 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 MAEAQ7L5Y9 396 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 ESX1Q8N693 406 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 MARCH10Q8NA82 808 aaPredicted RBP3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 KLHDC4Q8TBB5 520 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 NUP133Q8WUM0 1156 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 SNRNP27Q8WVK2 155 aaKnown RBP3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 SSH1Q8WYL5 1049 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 RPGRQ92834 1020 aaKnown RBP3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 ERCC4Q92889 916 aaPredicted RBP3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 KAT5Q92993 513 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 PHKBQ93100 1093 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 FERMT2Q96AC1 680 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 ZBTB10Q96DT7 871 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 ZNF496Q96IT1 587 aaPredicted RBP3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 KIRREL1Q96J84 757 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 ORAI2Q96SN7 254 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 AP1M1Q9BXS5 423 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 KRTAP9-3Q9BYQ3 159 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 ALDH8A1Q9H2A2 487 aaPredicted RBP3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 TRIT1Q9H3H1 467 aaKnown RBP3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 SEMA4AQ9H3S1 761 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 BRD9Q9H8M2 597 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 IFT122Q9HBG6 1241 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 PNPLA8Q9NP80 782 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 STARD7Q9NQZ5 370 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 PRR13Q9NZ81 148 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 PDP2Q9P2J9 529 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms