RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 TECP42680 631 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 PHKA2P46019 1235 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 POLGP54098 1239 aaPredicted RBP13.37□□□□□ -0.27
UBR1-206ENST00000566493 RBM10P98175 930 aaKnown RBP13.37□□□□□ -0.27
UBR1-206ENST00000566493 PLA2G4FQ68DD2 849 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 LLGL2Q6P1M3 1020 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 GLB1LQ6UWU2 654 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 TMEM184AQ6ZMB5 413 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 PIK3AP1Q6ZUJ8 805 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 CATSPER4Q7RTX7 472 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 ZNF598Q86UK7 904 aaKnown RBP13.37□□□□□ -0.27
UBR1-206ENST00000566493 TMEM87AQ8NBN3 555 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 TMEM169Q96HH4 297 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 RPGRIP1Q96KN7 1286 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 CEP170P1Q96L14 293 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 MFSD14AQ96MC6 490 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 CEP89Q96ST8 783 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 BRMS1Q9HCU9 246 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 KCNMB3Q9NPA1 279 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 CYP26B1Q9NR63 512 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 PPME1Q9Y570 386 aa13.37□□□□□ -0.27
UBR1-206ENST00000566493 HIDE1A8MVS5 230 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 EML1O00423 815 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 TBX3O15119 743 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 HOXB8P17481 243 aaPredicted RBP13.36□□□□□ -0.27
UBR1-206ENST00000566493 RAB27AP51159 221 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 BCAR1P56945 870 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 ANKRD54Q6NXT1 300 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 OTUD6AQ7L8S5 288 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 KSR1Q8IVT5 923 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 SLC39A11Q8N1S5 342 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 VN1R2Q8NFZ6 395 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 EDAQ92838 391 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 CASP10Q92851 521 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 PGBD4Q96DM1 585 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 TRAIPQ9BWF2 469 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 FAM105AQ9NUU6 356 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 ORC3Q9UBD5 711 aaPredicted RBP13.36□□□□□ -0.27
UBR1-206ENST00000566493 VAV3Q9UKW4 847 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 TPCN1Q9ULQ1 816 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 COL4A3BPQ9Y5P4 624 aa13.36□□□□□ -0.27
UBR1-206ENST00000566493 NT5C1B-RDH14C9J2C7 533 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 ZC3H11AO75152 810 aaKnown RBP eCLIP13.35□□□□□ -0.27
UBR1-206ENST00000566493 CXCL14O95715 111 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 SRGAP2CP0DJJ0 459 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 C7P10643 843 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 RFC5P40937 340 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 NPEPPSP55786 919 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 ANAPC15P60006 121 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 RNASELQ05823 741 aaKnown RBP13.35□□□□□ -0.27
UBR1-206ENST00000566493 CBX2Q14781 532 aaPredicted RBP13.35□□□□□ -0.27
UBR1-206ENST00000566493 EPHA7Q15375 998 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 LONRF3Q496Y0 759 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 TPRNQ4KMQ1 711 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 NCAPH2Q6IBW4 605 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 SLFN12Q8IYM2 578 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 MRPL43Q8N983 215 aaKnown RBP13.35□□□□□ -0.27
UBR1-206ENST00000566493 OXER1Q8TDS5 423 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 TCP11Q8WWU5 503 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 PRPF31Q8WWY3 499 aaKnown RBP13.35□□□□□ -0.27
UBR1-206ENST00000566493 PSPC1Q8WXF1 523 aaKnown RBP13.35□□□□□ -0.27
UBR1-206ENST00000566493 SUSD6Q92537 303 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 LPPQ93052 612 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 APOL5Q9BWW9 433 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 KCNH6Q9H252 994 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 INPP5FQ9Y2H2 1132 aa13.35□□□□□ -0.27
UBR1-206ENST00000566493 C2orf71A6NGG8 1288 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 GAS2O43903 313 aaKnown RBP13.34□□□□□ -0.27
UBR1-206ENST00000566493 ZNF623O75123 536 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 YWHABP31946 246 aaKnown RBP13.34□□□□□ -0.27
UBR1-206ENST00000566493 KRT2P35908 639 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 AK2P54819 239 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 KCNC3Q14003 757 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 XKR9Q5GH70 373 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 NOMO2Q5JPE7 1267 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 CES5AQ6NT32 575 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 HFE2Q6ZVN8 426 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 SRGAP1Q7Z6B7 1085 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 C4orf19Q8IY42 314 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 URGCPQ8TCY9 931 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 TMEM143Q96AN5 459 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 LXNQ9BS40 222 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 ZSWIM4Q9H7M6 989 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 GJB4Q9NTQ9 266 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 AGPAT5Q9NUQ2 364 aa13.34□□□□□ -0.27
UBR1-206ENST00000566493 TMEM221A6NGB7 291 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 M0R296 226 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 ASAP2O43150 1006 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 EIF5BO60841 1220 aaKnown RBP13.33□□□□□ -0.28
UBR1-206ENST00000566493 ZXDAP98168 799 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 LAMTOR4Q0VGL1 99 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 GIT2Q14161 759 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 SYCE2Q6PIF2 218 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 TRIM67Q6ZTA4 783 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 VPS52Q8N1B4 723 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 HAS1Q92839 578 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 PBXIP1Q96AQ6 731 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 DYDC2Q96IM9 177 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 FAM193BQ96PV7 902 aaPredicted RBP13.33□□□□□ -0.28
UBR1-206ENST00000566493 GBP3Q9H0R5 595 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms