RNA–Protein interactions for RNA: ENST00000566426.1

PDXDC1-213, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-213ENST00000566426 ZNF623O75123 536 aa22.75■■□□□ 1.23
PDXDC1-213ENST00000566426 NONOQ15233 471 aaKnown RBP eCLIP22.75■■□□□ 1.23
PDXDC1-213ENST00000566426 TARBP2Q15633 366 aaKnown RBP22.75■■□□□ 1.23
PDXDC1-213ENST00000566426 LONRF3Q496Y0 759 aa22.75■■□□□ 1.23
PDXDC1-213ENST00000566426 ZNF410Q86VK4 478 aa22.75■■□□□ 1.23
PDXDC1-213ENST00000566426 URGCPQ8TCY9 931 aa22.75■■□□□ 1.23
PDXDC1-213ENST00000566426 LENG9Q96B70 501 aa22.75■■□□□ 1.23
PDXDC1-213ENST00000566426 KLHL5Q96PQ7 755 aa22.75■■□□□ 1.23
PDXDC1-213ENST00000566426 GBP3Q9H0R5 595 aa22.75■■□□□ 1.23
PDXDC1-213ENST00000566426 DCHS1Q96JQ0 3298 aa22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 A0A087WZ62 844 aa22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 MSH4O15457 936 aa22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 CHMP2AO43633 222 aa22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 OFD1O75665 1012 aa22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 ADD1P35611 737 aaKnown RBP22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 SLC11A1P49279 550 aa22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 CLCN4P51793 760 aa22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 FGD1P98174 961 aa22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 UGCGQ16739 394 aa22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 ELMSAN1Q6PJG2 1045 aa22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 RDM1Q8NG50 284 aa22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 KCNG4Q8TDN1 519 aa22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 BCL7CQ8WUZ0 217 aaPredicted RBP22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 FDXACB1Q9BRP7 624 aaPredicted RBP22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 TEKT3Q9BXF9 490 aa22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 NIFKQ9BYG3 293 aaKnown RBP22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 WNT16Q9UBV4 365 aa22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 SEPT9Q9UHD8 586 aaPredicted RBP22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 DPP7Q9UHL4 492 aa22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 WDR81Q562E7 1941 aa22.74■■□□□ 1.23
PDXDC1-213ENST00000566426 DENND4AQ7Z401 1863 aa22.73■■□□□ 1.23
PDXDC1-213ENST00000566426 ALDH2P05091 517 aa22.73■■□□□ 1.23
PDXDC1-213ENST00000566426 RFX1P22670 979 aa22.73■■□□□ 1.23
PDXDC1-213ENST00000566426 USP11P51784 963 aa22.73■■□□□ 1.23
PDXDC1-213ENST00000566426 AKAP17AQ02040 695 aaKnown RBP22.73■■□□□ 1.23
PDXDC1-213ENST00000566426 DRP2Q13474 957 aa22.73■■□□□ 1.23
PDXDC1-213ENST00000566426 MTERF2Q49AM1 385 aa22.73■■□□□ 1.23
PDXDC1-213ENST00000566426 XKR3Q5GH77 459 aa22.73■■□□□ 1.23
PDXDC1-213ENST00000566426 LRCH2Q5VUJ6 765 aa22.73■■□□□ 1.23
PDXDC1-213ENST00000566426 CATSPER4Q7RTX7 472 aa22.73■■□□□ 1.23
PDXDC1-213ENST00000566426 CCDC136Q96JN2 1154 aa22.73■■□□□ 1.23
PDXDC1-213ENST00000566426 FAM193BQ96PV7 902 aaPredicted RBP22.73■■□□□ 1.23
PDXDC1-213ENST00000566426 MRPL17Q9NRX2 175 aaKnown RBP22.73■■□□□ 1.23
PDXDC1-213ENST00000566426 KANSL3Q9P2N6 904 aa22.73■■□□□ 1.23
PDXDC1-213ENST00000566426 DNAJB4Q9UDY4 337 aa22.73■■□□□ 1.23
PDXDC1-213ENST00000566426 ADAMTS3O15072 1205 aa22.72■■□□□ 1.23
PDXDC1-213ENST00000566426 LMNAP02545 664 aaKnown RBP22.72■■□□□ 1.23
PDXDC1-213ENST00000566426 HMGB1P09429 215 aaKnown RBP22.72■■□□□ 1.23
PDXDC1-213ENST00000566426 CNPP09543 421 aaKnown RBP22.72■■□□□ 1.23
PDXDC1-213ENST00000566426 KRT32Q14532 448 aa22.72■■□□□ 1.23
PDXDC1-213ENST00000566426 TSGA10IPQ3SY00 556 aa22.72■■□□□ 1.23
PDXDC1-213ENST00000566426 CYP26C1Q6V0L0 522 aa22.72■■□□□ 1.23
PDXDC1-213ENST00000566426 RHPN2Q8IUC4 686 aa22.72■■□□□ 1.23
PDXDC1-213ENST00000566426 CMASQ8NFW8 434 aaPredicted RBP22.72■■□□□ 1.23
PDXDC1-213ENST00000566426 STAMQ92783 540 aa22.72■■□□□ 1.23
PDXDC1-213ENST00000566426 SLC5A5Q92911 643 aa22.72■■□□□ 1.23
PDXDC1-213ENST00000566426 VN1R3Q9BXE9 311 aa22.72■■□□□ 1.23
PDXDC1-213ENST00000566426 UNC45AQ9H3U1 944 aa22.72■■□□□ 1.23
PDXDC1-213ENST00000566426 SUCLA2Q9P2R7 463 aaPredicted RBP22.72■■□□□ 1.23
PDXDC1-213ENST00000566426 SSX2IPQ9Y2D8 614 aa22.72■■□□□ 1.23
PDXDC1-213ENST00000566426 IGKV6-21A0A0C4DH24 114 aa22.71■■□□□ 1.23
PDXDC1-213ENST00000566426 PRPF3O43395 683 aaKnown RBP22.71■■□□□ 1.23
PDXDC1-213ENST00000566426 SSBP05455 408 aaKnown RBP eCLIP22.71■■□□□ 1.23
PDXDC1-213ENST00000566426 MIER3Q7Z3K6 550 aa22.71■■□□□ 1.23
PDXDC1-213ENST00000566426 ZNF280BQ86YH2 543 aa22.71■■□□□ 1.23
PDXDC1-213ENST00000566426 CCDC148Q8NFR7 591 aa22.71■■□□□ 1.23
PDXDC1-213ENST00000566426 JPH2Q9BR39 696 aaPredicted RBP22.71■■□□□ 1.23
PDXDC1-213ENST00000566426 TMEM175Q9BSA9 504 aa22.71■■□□□ 1.23
PDXDC1-213ENST00000566426 FAN1Q9Y2M0 1017 aa22.71■■□□□ 1.23
PDXDC1-213ENST00000566426 MEIS3P2A8K0S8 358 aa22.7■■□□□ 1.22
PDXDC1-213ENST00000566426 LILRB3O75022 631 aa22.7■■□□□ 1.22
PDXDC1-213ENST00000566426 GBP2P32456 591 aaPredicted RBP22.7■■□□□ 1.22
PDXDC1-213ENST00000566426 FEZF2Q8TBJ5 459 aa22.7■■□□□ 1.22
PDXDC1-213ENST00000566426 NXPE3Q969Y0 559 aa22.7■■□□□ 1.22
PDXDC1-213ENST00000566426 PCDHB2Q9Y5E7 798 aa22.7■■□□□ 1.22
PDXDC1-213ENST00000566426 WDR87Q6ZQQ6 2873 aa22.7■■□□□ 1.22
PDXDC1-213ENST00000566426 MAFO75444 373 aaPredicted RBP22.69■■□□□ 1.22
PDXDC1-213ENST00000566426 URODP06132 367 aa22.69■■□□□ 1.22
PDXDC1-213ENST00000566426 ADH1AP07327 375 aa22.69■■□□□ 1.22
PDXDC1-213ENST00000566426 CFHP08603 1231 aa22.69■■□□□ 1.22
PDXDC1-213ENST00000566426 ADCK5Q3MIX3 580 aa22.69■■□□□ 1.22
PDXDC1-213ENST00000566426 NLRP4Q96MN2 994 aa22.69■■□□□ 1.22
PDXDC1-213ENST00000566426 RHOBTB2Q9BYZ6 727 aa22.69■■□□□ 1.22
PDXDC1-213ENST00000566426 WDR6Q9NNW5 1121 aaKnown RBP22.69■■□□□ 1.22
PDXDC1-213ENST00000566426 MAN1C1Q9NR34 630 aa22.69■■□□□ 1.22
PDXDC1-213ENST00000566426 EP300Q09472 2414 aaPredicted RBP22.69■■□□□ 1.22
PDXDC1-213ENST00000566426 CNTNAP2Q9UHC6 1331 aa22.68■■□□□ 1.22
PDXDC1-213ENST00000566426 CCDC195A0A1B0GUA6 201 aa22.68■■□□□ 1.22
PDXDC1-213ENST00000566426 NARSO43776 548 aaKnown RBP22.68■■□□□ 1.22
PDXDC1-213ENST00000566426 DDHD2O94830 711 aa22.68■■□□□ 1.22
PDXDC1-213ENST00000566426 CEP89Q96ST8 783 aa22.68■■□□□ 1.22
PDXDC1-213ENST00000566426 RSAD1Q9HA92 442 aa22.68■■□□□ 1.22
PDXDC1-213ENST00000566426 AGPAT5Q9NUQ2 364 aa22.68■■□□□ 1.22
PDXDC1-213ENST00000566426 DDX11L8A8MPP1 907 aa22.67■■□□□ 1.22
PDXDC1-213ENST00000566426 C2CD2LO14523 706 aa22.67■■□□□ 1.22
PDXDC1-213ENST00000566426 PSMD10O75832 226 aa22.67■■□□□ 1.22
PDXDC1-213ENST00000566426 SOD2P04179 222 aa22.67■■□□□ 1.22
PDXDC1-213ENST00000566426 AK2P54819 239 aa22.67■■□□□ 1.22
PDXDC1-213ENST00000566426 ZC3H14Q6PJT7 736 aaKnown RBP22.67■■□□□ 1.22
PDXDC1-213ENST00000566426 AGMOQ6ZNB7 445 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms