RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 GDF15Q99988 308 aa9.03□□□□□ -0.96
CDH13-208ENST00000566333 C7orf25Q9BPX7 421 aa9.03□□□□□ -0.96
CDH13-208ENST00000566333 IFIH1Q9BYX4 1025 aaKnown RBP9.03□□□□□ -0.96
CDH13-208ENST00000566333 BLZF1Q9H2G9 400 aa9.03□□□□□ -0.96
CDH13-208ENST00000566333 PRO3102Q9H379 93 aa9.03□□□□□ -0.96
CDH13-208ENST00000566333 TMX1Q9H3N1 280 aa9.03□□□□□ -0.96
CDH13-208ENST00000566333 C17orf75Q9HAS0 396 aa9.03□□□□□ -0.96
CDH13-208ENST00000566333 ERVK-5Q9HDB9 667 aa9.03□□□□□ -0.96
CDH13-208ENST00000566333 IL23AQ9NPF7 189 aa9.03□□□□□ -0.96
CDH13-208ENST00000566333 DACT1Q9NYF0 836 aa9.03□□□□□ -0.96
CDH13-208ENST00000566333 NOC2LQ9Y3T9 749 aaKnown RBP9.03□□□□□ -0.96
CDH13-208ENST00000566333 SQORQ9Y6N5 450 aa9.03□□□□□ -0.96
CDH13-208ENST00000566333 ATG2AQ2TAZ0 1938 aa9.03□□□□□ -0.96
CDH13-208ENST00000566333 PHLPP2Q6ZVD8 1323 aa9.03□□□□□ -0.96
CDH13-208ENST00000566333 LRRIQ4A6NIV6 560 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 TTLL13PA6NNM8 815 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 MGEA5O60502 916 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 PPP1R37O75864 691 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 FAM13AO94988 1023 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 PARNO95453 639 aaKnown RBP9.02□□□□□ -0.97
CDH13-208ENST00000566333 SRGAP2CP0DJJ0 459 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 ACRP10323 421 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 EIF4BP23588 611 aaKnown RBP9.02□□□□□ -0.97
CDH13-208ENST00000566333 MCM4P33991 863 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 PHKA2P46019 1235 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 CASP5P51878 434 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 PEX3P56589 373 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 ASIC1P78348 528 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 DPYDQ12882 1025 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 PPIGQ13427 754 aaKnown RBP eCLIP9.02□□□□□ -0.97
CDH13-208ENST00000566333 TFDP1Q14186 410 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 PPP2R5AQ15172 486 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 TMEM199Q8N511 208 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 CNNM3Q8NE01 707 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 GLIS3Q8NEA6 775 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 SPIRE2Q8WWL2 714 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 HPS3Q969F9 1004 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 TIGD1Q96MW7 591 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 SCLT1Q96NL6 688 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 STRA6Q9BX79 667 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 GCOM2Q9BZD3 368 aaPredicted RBP9.02□□□□□ -0.97
CDH13-208ENST00000566333 PARVGQ9HBI0 331 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 OLFML3Q9NRN5 406 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 PADI3Q9ULW8 664 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 CNTNAP2Q9UHC6 1331 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 SZT2Q5T011 3432 aa9.02□□□□□ -0.97
CDH13-208ENST00000566333 ZMYM2Q9UBW7 1377 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 COL4A4P53420 1690 aaPredicted RBP9.01□□□□□ -0.97
CDH13-208ENST00000566333 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.01□□□□□ -0.97
CDH13-208ENST00000566333 K7ENM7 598 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 SLC16A4O15374 487 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 B4GALT5O43286 388 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 GTPBP6O43824 516 aaPredicted RBP9.01□□□□□ -0.97
CDH13-208ENST00000566333 TSPAN1O60635 241 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 RPS6KA5O75582 802 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 KRT18P05783 430 aaKnown RBP9.01□□□□□ -0.97
CDH13-208ENST00000566333 MYL1P05976 194 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 PFKMP08237 780 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 MAPTP10636 758 aaKnown RBP9.01□□□□□ -0.97
CDH13-208ENST00000566333 IDEP14735 1019 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 GAP43P17677 238 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 SFPQP23246 707 aaKnown RBP eCLIP9.01□□□□□ -0.97
CDH13-208ENST00000566333 NMT1P30419 496 aaKnown RBP9.01□□□□□ -0.97
CDH13-208ENST00000566333 CDC42EP1Q00587 391 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 PAK2Q13177 524 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 PNOCQ13519 176 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 DSC3Q14574 896 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 POSTNQ15063 836 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 FAM187BQ17R55 369 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 TMEM240Q5SV17 173 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 ODR4Q5SWX8 454 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 RASIP1Q5U651 963 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 CNKSR3Q6P9H4 555 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 UNC13DQ70J99 1090 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 SRGAP1Q7Z6B7 1085 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 USP38Q8NB14 1042 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 DBF4BQ8NFT6 615 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 SPATA20Q8TB22 786 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 DEPTORQ8TB45 409 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 ERCC4Q92889 916 aaPredicted RBP9.01□□□□□ -0.97
CDH13-208ENST00000566333 IFT74Q96LB3 600 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.01□□□□□ -0.97
CDH13-208ENST00000566333 NTPCRQ9BSD7 190 aaKnown RBP9.01□□□□□ -0.97
CDH13-208ENST00000566333 FZD8Q9H461 694 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 ST6GALNAC4Q9H4F1 302 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 AGPAT5Q9NUQ2 364 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 LARSQ9P2J5 1176 aaKnown RBP9.01□□□□□ -0.97
CDH13-208ENST00000566333 SEL1LQ9UBV2 794 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 ST3GAL5Q9UNP4 418 aa9.01□□□□□ -0.97
CDH13-208ENST00000566333 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9□□□□□ -0.97
CDH13-208ENST00000566333 DENND3A2RUS2 1198 aa9□□□□□ -0.97
CDH13-208ENST00000566333 CCDC169A6NNP5 214 aa9□□□□□ -0.97
CDH13-208ENST00000566333 GOLGA6L22H0YM25 854 aa9□□□□□ -0.97
CDH13-208ENST00000566333 INO80B-WBP1J3KQ70 363 aa9□□□□□ -0.97
CDH13-208ENST00000566333 TRAK2O60296 914 aa9□□□□□ -0.97
CDH13-208ENST00000566333 KINO60870 393 aaKnown RBP9□□□□□ -0.97
CDH13-208ENST00000566333 PRKCBP05771 671 aa9□□□□□ -0.97
CDH13-208ENST00000566333 MYBP10242 640 aa9□□□□□ -0.97
CDH13-208ENST00000566333 HOXA11P31270 313 aaPredicted RBP9□□□□□ -0.97
CDH13-208ENST00000566333 AMPD3Q01432 767 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms