RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 INTS8Q75QN2 995 aaKnown RBP9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 FMNL3Q8IVF7 1028 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 HOMEZQ8IX15 550 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 DHX37Q8IY37 1157 aaKnown RBP9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 FAM186BQ8IYM0 893 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 SYCP3Q8IZU3 236 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 C17orf53Q8N3J3 647 aaPredicted RBP9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 XXYLT1Q8NBI6 393 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 NEK11Q8NG66 645 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 ATP8B4Q8TF62 1192 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 TCP11Q8WWU5 503 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 SLC7A3Q8WY07 619 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 VTI1AQ96AJ9 217 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 PPP1R13BQ96KQ4 1090 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 FBXL18Q96ME1 805 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 ABHD16BQ9H3Z7 469 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 TMEM134Q9H6X4 195 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 KMT5AQ9NQR1 393 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 ZNHIT6Q9NWK9 470 aaKnown RBP9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 TBX20Q9UMR3 447 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 PPP2R2CQ9Y2T4 447 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 PAXBP1Q9Y5B6 917 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 ADGRG1Q9Y653 693 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 STYXL1Q9Y6J8 313 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 TLL2Q9Y6L7 1015 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 SSU72P8A0A1W2PR75 194 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 TMEM150BA6NC51 233 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 NOP56O00567 594 aaKnown RBP9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 SLC16A4O15374 487 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 HBP1O60381 514 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 SNAI1O95863 264 aaPredicted RBP9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 IGHA2P01877 340 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 COL1A2P08123 1366 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 TXNP10599 105 aaKnown RBP9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 ANXA13P27216 316 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 CASP4P49662 377 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 ZNF157P51786 506 aaPredicted RBP9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 POLGP54098 1239 aaPredicted RBP9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 POU5F1BQ06416 359 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 ARHGAP1Q07960 439 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 GOLGA8FQ08AF8 430 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 GOLGA8DPQ0D2H9 430 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 SREBF2Q12772 1141 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 LY6KQ17RY6 165 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 MTERF2Q49AM1 385 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 WDR78Q5VTH9 848 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 IER5Q5VY09 327 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 IQSEC1Q6DN90 963 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 PDXDC1Q6P996 788 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 WDR59Q6PJI9 974 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 C17orf99Q6UX52 265 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 RAD9BQ6WBX8 426 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 GPIHBP1Q8IV16 184 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 FBXO16Q8IX29 292 aaPredicted RBP9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 PPTC7Q8NI37 304 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 TMC2Q8TDI7 906 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 CPLX3Q8WVH0 158 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 BSNDQ8WZ55 320 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 BAP1Q92560 729 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 USP6NLQ92738 828 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 EEF2KMTQ96G04 330 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 MAML3Q96JK9 1138 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 SPATA33Q96N06 139 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 POLR3FQ9H1D9 316 aaPredicted RBP9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 GANQ9H2C0 597 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 KIAA1586Q9HCI6 787 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 GPRC5CQ9NQ84 441 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 PCDH10Q9P2E7 1040 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 TELO2Q9Y4R8 837 aa9.69□□□□□ -0.86
LSM3P5-201ENST00000566307 ATP8B3O60423 1300 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 DENND3A2RUS2 1198 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 SOWAHDA6NJG2 315 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 USP27XA6NNY8 438 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 FAM155AB1AL88 458 aaPredicted RBP9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 EIF3CLB5ME19 914 aaKnown RBP9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 IGF2BP3O00425 579 aaKnown RBP eCLIP9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 CLIC2O15247 247 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 TLR2O60603 784 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 EXOC3O60645 756 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 NOL4O94818 638 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 LCA5LO95447 670 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 TNNT1P13805 278 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 GTF2H1P32780 548 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 CYLC1P35663 651 aaPredicted RBP9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 TM4SF4P48230 202 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 EFNA5P52803 228 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 ETF1P62495 437 aaKnown RBP9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 IRX5P78411 483 aaPredicted RBP9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 BFSP1Q12934 665 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 MAP2K5Q13163 448 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 MXD4Q14582 209 aaPredicted RBP9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 PLCB4Q15147 1175 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 TAF1CQ15572 869 aaPredicted RBP9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 EXOC3L4Q17RC7 722 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 HSDL1Q3SXM5 330 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 DUSP28Q4G0W2 176 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 ZNF484Q5JVG2 852 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 PPP1R15BQ5SWA1 713 aa9.68□□□□□ -0.86
LSM3P5-201ENST00000566307 OLFML2BQ68BL8 750 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms