RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 KCNC3Q14003 757 aa20.47■□□□□ 0.87
USB1-213ENST00000566292 EMC2Q15006 297 aa20.47■□□□□ 0.87
USB1-213ENST00000566292 LONRF3Q496Y0 759 aa20.47■□□□□ 0.87
USB1-213ENST00000566292 XKR9Q5GH70 373 aa20.47■□□□□ 0.87
USB1-213ENST00000566292 EXOC8Q8IYI6 725 aa20.47■□□□□ 0.87
USB1-213ENST00000566292 PSPC1Q8WXF1 523 aaKnown RBP20.47■□□□□ 0.87
USB1-213ENST00000566292 CDCA3Q99618 268 aaPredicted RBP20.47■□□□□ 0.87
USB1-213ENST00000566292 EIF2AK1Q9BQI3 630 aaKnown RBP20.47■□□□□ 0.87
USB1-213ENST00000566292 MRPL9Q9BYD2 267 aaKnown RBP20.47■□□□□ 0.87
USB1-213ENST00000566292 ENTPD7Q9NQZ7 604 aa20.47■□□□□ 0.87
USB1-213ENST00000566292 FAM105AQ9NUU6 356 aa20.47■□□□□ 0.87
USB1-213ENST00000566292 PUF60Q9UHX1 559 aaKnown RBP20.47■□□□□ 0.87
USB1-213ENST00000566292 HIDE1A8MVS5 230 aa20.46■□□□□ 0.87
USB1-213ENST00000566292 NT5C1B-RDH14C9J2C7 533 aa20.46■□□□□ 0.87
USB1-213ENST00000566292 DCXO43602 365 aa20.46■□□□□ 0.87
USB1-213ENST00000566292 ZNF623O75123 536 aa20.46■□□□□ 0.87
USB1-213ENST00000566292 SRGAP2CP0DJJ0 459 aa20.46■□□□□ 0.87
USB1-213ENST00000566292 ALADP13716 330 aa20.46■□□□□ 0.87
USB1-213ENST00000566292 BCAR1P56945 870 aa20.46■□□□□ 0.87
USB1-213ENST00000566292 KRT17Q04695 432 aa20.46■□□□□ 0.87
USB1-213ENST00000566292 CALCRLQ16602 461 aa20.46■□□□□ 0.87
USB1-213ENST00000566292 OTUD6AQ7L8S5 288 aa20.46■□□□□ 0.87
USB1-213ENST00000566292 TPH2Q8IWU9 490 aa20.46■□□□□ 0.87
USB1-213ENST00000566292 POP1Q99575 1024 aaKnown RBP20.46■□□□□ 0.87
USB1-213ENST00000566292 HSD17B14Q9BPX1 270 aa20.46■□□□□ 0.87
USB1-213ENST00000566292 XPNPEP1Q9NQW7 623 aa20.46■□□□□ 0.87
USB1-213ENST00000566292 AGPAT5Q9NUQ2 364 aa20.46■□□□□ 0.87
USB1-213ENST00000566292 PCDHA12Q9UN75 941 aa20.46■□□□□ 0.87
USB1-213ENST00000566292 USP15Q9Y4E8 981 aaPredicted RBP20.46■□□□□ 0.87
USB1-213ENST00000566292 SKIP12755 728 aa20.45■□□□□ 0.86
USB1-213ENST00000566292 TRIM29Q14134 588 aa20.45■□□□□ 0.86
USB1-213ENST00000566292 SRGAP1Q7Z6B7 1085 aa20.45■□□□□ 0.86
USB1-213ENST00000566292 FERMT3Q86UX7 667 aa20.45■□□□□ 0.86
USB1-213ENST00000566292 TCP11Q8WWU5 503 aa20.45■□□□□ 0.86
USB1-213ENST00000566292 MTMR9Q96QG7 549 aa20.45■□□□□ 0.86
USB1-213ENST00000566292 TTC12Q9H892 705 aaPredicted RBP20.45■□□□□ 0.86
USB1-213ENST00000566292 NGRNQ9NPE2 291 aaKnown RBP20.45■□□□□ 0.86
USB1-213ENST00000566292 FSD2A1L4K1 749 aa20.44■□□□□ 0.86
USB1-213ENST00000566292 GAS2O43903 313 aaKnown RBP20.44■□□□□ 0.86
USB1-213ENST00000566292 NEMFO60524 1076 aa20.44■□□□□ 0.86
USB1-213ENST00000566292 OFD1O75665 1012 aa20.44■□□□□ 0.86
USB1-213ENST00000566292 LYPLA2O95372 231 aa20.44■□□□□ 0.86
USB1-213ENST00000566292 HOXA11P31270 313 aaPredicted RBP20.44■□□□□ 0.86
USB1-213ENST00000566292 RAB27AP51159 221 aa20.44■□□□□ 0.86
USB1-213ENST00000566292 TMEM184AQ6ZMB5 413 aa20.44■□□□□ 0.86
USB1-213ENST00000566292 TMC7Q7Z402 723 aa20.44■□□□□ 0.86
USB1-213ENST00000566292 RNF149Q8NC42 400 aa20.44■□□□□ 0.86
USB1-213ENST00000566292 MTRQ99707 1265 aa20.44■□□□□ 0.86
USB1-213ENST00000566292 TBC1D13Q9NVG8 400 aa20.44■□□□□ 0.86
USB1-213ENST00000566292 PCDHB2Q9Y5E7 798 aa20.44■□□□□ 0.86
USB1-213ENST00000566292 TRIOO75962 3097 aa20.44■□□□□ 0.86
USB1-213ENST00000566292 ASAP2O43150 1006 aa20.43■□□□□ 0.86
USB1-213ENST00000566292 ZC3H11AO75152 810 aaKnown RBP eCLIP20.43■□□□□ 0.86
USB1-213ENST00000566292 TXKP42681 527 aa20.43■□□□□ 0.86
USB1-213ENST00000566292 ALDH7A1P49419 539 aaKnown RBP20.43■□□□□ 0.86
USB1-213ENST00000566292 GUCY1B3Q02153 619 aa20.43■□□□□ 0.86
USB1-213ENST00000566292 NOMO2Q5JPE7 1267 aa20.43■□□□□ 0.86
USB1-213ENST00000566292 UBXN11Q5T124 520 aa20.43■□□□□ 0.86
USB1-213ENST00000566292 GLB1LQ6UWU2 654 aa20.43■□□□□ 0.86
USB1-213ENST00000566292 AGMOQ6ZNB7 445 aa20.43■□□□□ 0.86
USB1-213ENST00000566292 TMEM173Q86WV6 379 aaPredicted RBP20.43■□□□□ 0.86
USB1-213ENST00000566292 CCDC83Q8IWF9 413 aa20.43■□□□□ 0.86
USB1-213ENST00000566292 RSPH1Q8WYR4 309 aa20.43■□□□□ 0.86
USB1-213ENST00000566292 TMEM60Q9H2L4 133 aa20.43■□□□□ 0.86
USB1-213ENST00000566292 NRDE2Q9H7Z3 1164 aa20.43■□□□□ 0.86
USB1-213ENST00000566292 LIMCH1Q9UPQ0 1083 aa20.43■□□□□ 0.86
USB1-213ENST00000566292 INPP5FQ9Y2H2 1132 aa20.43■□□□□ 0.86
USB1-213ENST00000566292 C2orf71A6NGG8 1288 aa20.42■□□□□ 0.86
USB1-213ENST00000566292 PRR33A8MZF0 331 aa20.42■□□□□ 0.86
USB1-213ENST00000566292 B4GALT3O60512 393 aa20.42■□□□□ 0.86
USB1-213ENST00000566292 LLGL2Q6P1M3 1020 aa20.42■□□□□ 0.86
USB1-213ENST00000566292 MRPL10Q7Z7H8 261 aaKnown RBP20.42■□□□□ 0.86
USB1-213ENST00000566292 RNF135Q8IUD6 432 aa20.42■□□□□ 0.86
USB1-213ENST00000566292 BCL7CQ8WUZ0 217 aaPredicted RBP20.42■□□□□ 0.86
USB1-213ENST00000566292 SUSD6Q92537 303 aa20.42■□□□□ 0.86
USB1-213ENST00000566292 ANKEF1Q9NU02 776 aa20.42■□□□□ 0.86
USB1-213ENST00000566292 MUTYHQ9UIF7 546 aa20.42■□□□□ 0.86
USB1-213ENST00000566292 POTEMA6NI47 508 aa20.41■□□□□ 0.86
USB1-213ENST00000566292 LOC730098B7Z3J9 87 aa20.41■□□□□ 0.86
USB1-213ENST00000566292 TECP42680 631 aa20.41■□□□□ 0.86
USB1-213ENST00000566292 SMC1AQ14683 1233 aaKnown RBP20.41■□□□□ 0.86
USB1-213ENST00000566292 ANKRD54Q6NXT1 300 aa20.41■□□□□ 0.86
USB1-213ENST00000566292 SYCE2Q6PIF2 218 aa20.41■□□□□ 0.86
USB1-213ENST00000566292 MRPL43Q8N983 215 aaKnown RBP20.41■□□□□ 0.86
USB1-213ENST00000566292 PGBD4Q96DM1 585 aa20.41■□□□□ 0.86
USB1-213ENST00000566292 TMEM169Q96HH4 297 aa20.41■□□□□ 0.86
USB1-213ENST00000566292 S1PR5Q9H228 398 aa20.41■□□□□ 0.86
USB1-213ENST00000566292 DNAJB4Q9UDY4 337 aa20.41■□□□□ 0.86
USB1-213ENST00000566292 TDRD15B5MCY1 1934 aaKnown RBP20.41■□□□□ 0.86
USB1-213ENST00000566292 A0A087WWV3 80 aa20.4■□□□□ 0.86
USB1-213ENST00000566292 TECTAO75443 2155 aa20.4■□□□□ 0.86
USB1-213ENST00000566292 GALTP07902 379 aa20.4■□□□□ 0.86
USB1-213ENST00000566292 ATP2B1P20020 1258 aa20.4■□□□□ 0.86
USB1-213ENST00000566292 MCM7P33993 719 aa20.4■□□□□ 0.86
USB1-213ENST00000566292 RARRES1P49788 294 aa20.4■□□□□ 0.86
USB1-213ENST00000566292 AFF1P51825 1210 aaKnown RBP20.4■□□□□ 0.86
USB1-213ENST00000566292 PTENP60484 403 aa20.4■□□□□ 0.86
USB1-213ENST00000566292 MXD4Q14582 209 aaPredicted RBP20.4■□□□□ 0.86
USB1-213ENST00000566292 HERC4Q5GLZ8 1057 aaPredicted RBP20.4■□□□□ 0.86
USB1-213ENST00000566292 ZNF280BQ86YH2 543 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms