RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 CYP2C9P11712 490 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 CCL5P13501 91 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 LBX1P52954 281 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 ACLYP53396 1101 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 UBASH3AP57075 661 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 LAMTOR4Q0VGL1 99 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 MAPK6Q16659 721 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 TMEM132AQ24JP5 1023 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 FAM47CQ5HY64 1035 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 TMEM63BQ5T3F8 832 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 SLFN12LQ6IEE8 588 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 TTI2Q6NXR4 508 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 CXCL17Q6UXB2 119 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 EPM2AIP1Q7L775 607 aaPredicted RBP10.78□□□□□ -0.68
SF3B3-207ENST00000566095 SRGAP1Q7Z6B7 1085 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 RHPN2Q8IUC4 686 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 ZC3H3Q8IXZ2 948 aaKnown RBP10.78□□□□□ -0.68
SF3B3-207ENST00000566095 DAW1Q8N136 415 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 ANKLE1Q8NAG6 615 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 CCDC150Q8NCX0 1101 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 SH3TC2Q8TF17 1288 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 LMBR1Q8WVP7 490 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 PRPF31Q8WWY3 499 aaKnown RBP10.78□□□□□ -0.68
SF3B3-207ENST00000566095 KAT2BQ92831 832 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 LENG1Q96BZ8 264 aaPredicted RBP10.78□□□□□ -0.68
SF3B3-207ENST00000566095 PRIMPOLQ96LW4 560 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 CEP89Q96ST8 783 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 GCOM2Q9BZD3 368 aaPredicted RBP10.78□□□□□ -0.68
SF3B3-207ENST00000566095 PAK6Q9NQU5 681 aaPredicted RBP10.78□□□□□ -0.68
SF3B3-207ENST00000566095 XPNPEP1Q9NQW7 623 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 STARD7Q9NQZ5 370 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 KCND1Q9NSA2 647 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 GTF2IRD1Q9UHL9 959 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 TRAF3IP3Q9Y228 551 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 FRMD4BQ9Y2L6 1034 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 ZKSCAN5Q9Y2L8 839 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 TELO2Q9Y4R8 837 aa10.78□□□□□ -0.68
SF3B3-207ENST00000566095 ZBTB42B2RXF5 422 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 SLC16A4O15374 487 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 SLC16A3O15427 465 aaKnown RBP10.77□□□□□ -0.69
SF3B3-207ENST00000566095 TLR3O15455 904 aaKnown RBP10.77□□□□□ -0.69
SF3B3-207ENST00000566095 SERPINC1P01008 464 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 EPB41P11171 864 aaKnown RBP10.77□□□□□ -0.69
SF3B3-207ENST00000566095 CD44P16070 742 aaKnown RBP10.77□□□□□ -0.69
SF3B3-207ENST00000566095 SFPQP23246 707 aaKnown RBP eCLIP10.77□□□□□ -0.69
SF3B3-207ENST00000566095 GLRA2P23416 452 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 NMT1P30419 496 aaKnown RBP10.77□□□□□ -0.69
SF3B3-207ENST00000566095 LIG4P49917 911 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 MCCD1P59942 119 aaPredicted RBP10.77□□□□□ -0.69
SF3B3-207ENST00000566095 CAP1Q01518 475 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 ENPEPQ07075 957 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 ITGA7Q13683 1181 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 NR1I3Q14994 352 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 KYAT1Q16773 422 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 NBPF20Q3BBV1 942 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 MAP4K3Q8IVH8 894 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 SMYD4Q8IYR2 804 aaPredicted RBP10.77□□□□□ -0.69
SF3B3-207ENST00000566095 RNF149Q8NC42 400 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 TMEM161BQ8NDZ6 487 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 CCDC112Q8NEF3 446 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 SCFD1Q8WVM8 642 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 NLRP7Q8WX94 980 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 ARMC5Q96C12 935 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 MED15Q96RN5 788 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 SH2D3AQ9BRG2 576 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 MRPL4Q9BYD3 311 aaKnown RBP10.77□□□□□ -0.69
SF3B3-207ENST00000566095 UNC93B1Q9H1C4 597 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 METTL14Q9HCE5 456 aaKnown RBP10.77□□□□□ -0.69
SF3B3-207ENST00000566095 KIAA1586Q9HCI6 787 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 GPRC5CQ9NQ84 441 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 SETD4Q9NVD3 440 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 PRMT7Q9NVM4 692 aaPredicted RBP10.77□□□□□ -0.69
SF3B3-207ENST00000566095 ARHGAP28Q9P2N2 729 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 HDAC6Q9UBN7 1215 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 TBX20Q9UMR3 447 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 PHF24Q9UPV7 400 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 MAPK8IP1Q9UQF2 711 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 DAAM1Q9Y4D1 1078 aa10.77□□□□□ -0.69
SF3B3-207ENST00000566095 CEP350Q5VT06 3117 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 ESPNB1AK53 854 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 HNRNPDLO14979 420 aaKnown RBP10.76□□□□□ -0.69
SF3B3-207ENST00000566095 AP5Z1O43299 807 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 ZNF500O60304 480 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-207ENST00000566095 PPP1R37O75864 691 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 ERLIN2O94905 339 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 PRPF6O94906 941 aaKnown RBP10.76□□□□□ -0.69
SF3B3-207ENST00000566095 LDHAP00338 332 aaKnown RBP10.76□□□□□ -0.69
SF3B3-207ENST00000566095 TFRCP02786 760 aaKnown RBP10.76□□□□□ -0.69
SF3B3-207ENST00000566095 TUBB4AP04350 444 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 PTMAP06454 111 aaKnown RBP10.76□□□□□ -0.69
SF3B3-207ENST00000566095 GJB1P08034 283 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 MYBP10242 640 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 CLCN3P51790 818 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 PLCB2Q00722 1185 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 ADAM9Q13443 819 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 CAPSQ13938 189 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 ZCWPW2Q504Y3 356 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 TCP11X2Q5H9J9 407 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 FIGNQ5HY92 759 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 LHX8Q68G74 356 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms