RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 PRPF31Q8WWY3 499 aaKnown RBP11.02□□□□□ -0.65
CNOT1-208ENST00000565697 TMEM143Q96AN5 459 aa11.02□□□□□ -0.65
CNOT1-208ENST00000565697 INTS4Q96HW7 963 aaKnown RBP11.02□□□□□ -0.65
CNOT1-208ENST00000565697 LMAN2LQ9H0V9 348 aa11.02□□□□□ -0.65
CNOT1-208ENST00000565697 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.02□□□□□ -0.65
CNOT1-208ENST00000565697 AAASQ9NRG9 546 aa11.02□□□□□ -0.65
CNOT1-208ENST00000565697 A0A0U1RQF3 1178 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 TBKBP1A7MCY6 615 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 ZBTB39O15060 712 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 MED24O75448 989 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 BMP15O95972 392 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 SRGAP2CP0DJJ0 459 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 CCT6AP40227 531 aaKnown RBP11.01□□□□□ -0.65
CNOT1-208ENST00000565697 PHKA2P46019 1235 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 RAB27AP51159 221 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 NCBP1Q09161 790 aaKnown RBP11.01□□□□□ -0.65
CNOT1-208ENST00000565697 NBR1Q14596 966 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 SKIV2LQ15477 1246 aaKnown RBP11.01□□□□□ -0.65
CNOT1-208ENST00000565697 TIGD5Q53EQ6 642 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 KRT79Q5XKE5 535 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 SPRED2Q7Z698 418 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 ECHDC2Q86YB7 292 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 KSR1Q8IVT5 923 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 ABI1Q8IZP0 508 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 RNF149Q8NC42 400 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 PIGOQ8TEQ8 1089 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 P2RX5Q93086 422 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 MRPL38Q96DV4 380 aaKnown RBP11.01□□□□□ -0.65
CNOT1-208ENST00000565697 TRAIPQ9BWF2 469 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 TMEM117Q9H0C3 514 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 IFT122Q9HBG6 1241 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 THEGQ9P2T0 379 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 NLRC5Q86WI3 1866 aa11.01□□□□□ -0.65
CNOT1-208ENST00000565697 LAMA2P24043 3122 aaKnown RBP11□□□□□ -0.65
CNOT1-208ENST00000565697 ARID2Q68CP9 1835 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 ARHGEF35A5YM69 484 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 RBAK-RBAKDNI3L0D1 243 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 K7ELQ4 463 aaPredicted RBP11□□□□□ -0.65
CNOT1-208ENST00000565697 USO1O60763 962 aaKnown RBP11□□□□□ -0.65
CNOT1-208ENST00000565697 ERLIN2O94905 339 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 FGFR4P22455 802 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 AXLP30530 894 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 ARL2P36404 184 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 ATP2C1P98194 919 aaPredicted RBP11□□□□□ -0.65
CNOT1-208ENST00000565697 CSPP1Q1MSJ5 1256 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 AAK1Q2M2I8 961 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 PAN2Q504Q3 1202 aaKnown RBP11□□□□□ -0.65
CNOT1-208ENST00000565697 SPOUT1Q5T280 376 aaKnown RBP11□□□□□ -0.65
CNOT1-208ENST00000565697 FAM102BQ5T8I3 360 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 ARL6IP4Q66PJ3 421 aaKnown RBP11□□□□□ -0.65
CNOT1-208ENST00000565697 TWF2Q6IBS0 349 aaKnown RBP11□□□□□ -0.65
CNOT1-208ENST00000565697 KCTD17Q8N5Z5 321 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 IGSF22Q8N9C0 903 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 SNX29Q8TEQ0 813 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 ATXN2LQ8WWM7 1075 aaKnown RBP11□□□□□ -0.65
CNOT1-208ENST00000565697 SYMPKQ92797 1274 aaKnown RBP11□□□□□ -0.65
CNOT1-208ENST00000565697 PGBD4Q96DM1 585 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 MRPL9Q9BYD2 267 aaKnown RBP11□□□□□ -0.65
CNOT1-208ENST00000565697 NFKBIZQ9BYH8 718 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 XPNPEP1Q9NQW7 623 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 COG5Q9UP83 839 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 PIN4Q9Y237 131 aaKnown RBP11□□□□□ -0.65
CNOT1-208ENST00000565697 PCDHB12Q9Y5F1 795 aa11□□□□□ -0.65
CNOT1-208ENST00000565697 MRPL42Q9Y6G3 142 aaKnown RBP11□□□□□ -0.65
CNOT1-208ENST00000565697 COL4A4P53420 1690 aaPredicted RBP10.99□□□□□ -0.65
CNOT1-208ENST00000565697 VPS37CA5D8V6 355 aaPredicted RBP10.99□□□□□ -0.65
CNOT1-208ENST00000565697 CARNS1A5YM72 827 aa10.99□□□□□ -0.65
CNOT1-208ENST00000565697 ZNF623O75123 536 aa10.99□□□□□ -0.65
CNOT1-208ENST00000565697 CSDE1O75534 798 aaKnown RBP10.99□□□□□ -0.65
CNOT1-208ENST00000565697 LINC00271P0C7V0 271 aa10.99□□□□□ -0.65
CNOT1-208ENST00000565697 LAG3P18627 525 aa10.99□□□□□ -0.65
CNOT1-208ENST00000565697 PTPN5P54829 565 aa10.99□□□□□ -0.65
CNOT1-208ENST00000565697 PTENP60484 403 aa10.99□□□□□ -0.65
CNOT1-208ENST00000565697 PADI6Q6TGC4 694 aa10.99□□□□□ -0.65
CNOT1-208ENST00000565697 LRRC43Q8N309 656 aa10.99□□□□□ -0.65
CNOT1-208ENST00000565697 CNNM3Q8NE01 707 aa10.99□□□□□ -0.65
CNOT1-208ENST00000565697 SNX21Q969T3 373 aa10.99□□□□□ -0.65
CNOT1-208ENST00000565697 NT5C3AQ9H0P0 336 aa10.99□□□□□ -0.65
CNOT1-208ENST00000565697 POLR3FQ9H1D9 316 aaPredicted RBP10.99□□□□□ -0.65
CNOT1-208ENST00000565697 AGPAT5Q9NUQ2 364 aa10.99□□□□□ -0.65
CNOT1-208ENST00000565697 FAM105AQ9NUU6 356 aa10.99□□□□□ -0.65
CNOT1-208ENST00000565697 DAXXQ9UER7 740 aaPredicted RBP10.99□□□□□ -0.65
CNOT1-208ENST00000565697 KIAA1024Q9UPX6 916 aa10.99□□□□□ -0.65
CNOT1-208ENST00000565697 DNM3Q9UQ16 869 aa10.99□□□□□ -0.65
CNOT1-208ENST00000565697 PRRC2BQ5JSZ5 2229 aaKnown RBP10.99□□□□□ -0.65
CNOT1-208ENST00000565697 FNDC1Q4ZHG4 1894 aaPredicted RBP10.98□□□□□ -0.65
CNOT1-208ENST00000565697 INO80B-WBP1J3KQ70 363 aa10.98□□□□□ -0.65
CNOT1-208ENST00000565697 SLC26A4O43511 780 aa10.98□□□□□ -0.65
CNOT1-208ENST00000565697 NCK2O43639 380 aa10.98□□□□□ -0.65
CNOT1-208ENST00000565697 FGFR1P11362 822 aa10.98□□□□□ -0.65
CNOT1-208ENST00000565697 PDIA4P13667 645 aaKnown RBP10.98□□□□□ -0.65
CNOT1-208ENST00000565697 CYP11B2P19099 503 aa10.98□□□□□ -0.65
CNOT1-208ENST00000565697 GLRA2P23416 452 aa10.98□□□□□ -0.65
CNOT1-208ENST00000565697 GATMP50440 423 aa10.98□□□□□ -0.65
CNOT1-208ENST00000565697 MRPS5P82675 430 aaKnown RBP10.98□□□□□ -0.65
CNOT1-208ENST00000565697 PPP2R5AQ15172 486 aa10.98□□□□□ -0.65
CNOT1-208ENST00000565697 TJAP1Q5JTD0 557 aa10.98□□□□□ -0.65
CNOT1-208ENST00000565697 ZNF598Q86UK7 904 aaKnown RBP10.98□□□□□ -0.65
CNOT1-208ENST00000565697 HSCBQ8IWL3 235 aa10.98□□□□□ -0.65
CNOT1-208ENST00000565697 ZBTB8OSQ8IWT0 167 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms