RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 TWF2Q6IBS0 349 aaKnown RBP17.49■□□□□ 0.39
CDH3-204ENST00000565453 PDE12Q6L8Q7 609 aaKnown RBP17.49■□□□□ 0.39
CDH3-204ENST00000565453 SRGAP1Q7Z6B7 1085 aa17.49■□□□□ 0.39
CDH3-204ENST00000565453 FERMT3Q86UX7 667 aa17.49■□□□□ 0.39
CDH3-204ENST00000565453 SLC39A11Q8N1S5 342 aa17.49■□□□□ 0.39
CDH3-204ENST00000565453 VN1R2Q8NFZ6 395 aa17.49■□□□□ 0.39
CDH3-204ENST00000565453 TCP11Q8WWU5 503 aa17.49■□□□□ 0.39
CDH3-204ENST00000565453 C11orf16Q9NQ32 467 aa17.49■□□□□ 0.39
CDH3-204ENST00000565453 FAM105AQ9NUU6 356 aa17.49■□□□□ 0.39
CDH3-204ENST00000565453 MEIS3P2A8K0S8 358 aa17.48■□□□□ 0.39
CDH3-204ENST00000565453 ASAP2O43150 1006 aa17.48■□□□□ 0.39
CDH3-204ENST00000565453 PPM1AP35813 382 aa17.48■□□□□ 0.39
CDH3-204ENST00000565453 TXKP42681 527 aa17.48■□□□□ 0.39
CDH3-204ENST00000565453 COASYQ13057 564 aa17.48■□□□□ 0.39
CDH3-204ENST00000565453 KCNC3Q14003 757 aa17.48■□□□□ 0.39
CDH3-204ENST00000565453 DUSP6Q16828 381 aa17.48■□□□□ 0.39
CDH3-204ENST00000565453 ADHFE1Q8IWW8 467 aa17.48■□□□□ 0.39
CDH3-204ENST00000565453 MICAL1Q8TDZ2 1067 aa17.48■□□□□ 0.39
CDH3-204ENST00000565453 RSPH1Q8WYR4 309 aa17.48■□□□□ 0.39
CDH3-204ENST00000565453 LPPQ93052 612 aa17.48■□□□□ 0.39
CDH3-204ENST00000565453 MTRQ99707 1265 aa17.48■□□□□ 0.39
CDH3-204ENST00000565453 MRPL9Q9BYD2 267 aaKnown RBP17.48■□□□□ 0.39
CDH3-204ENST00000565453 TLE6Q9H808 572 aa17.48■□□□□ 0.39
CDH3-204ENST00000565453 ANKEF1Q9NU02 776 aa17.48■□□□□ 0.39
CDH3-204ENST00000565453 SPG21Q9NZD8 308 aa17.48■□□□□ 0.39
CDH3-204ENST00000565453 PER2O15055 1255 aa17.47■□□□□ 0.39
CDH3-204ENST00000565453 SRGAP2CP0DJJ0 459 aa17.47■□□□□ 0.39
CDH3-204ENST00000565453 SKIP12755 728 aa17.47■□□□□ 0.39
CDH3-204ENST00000565453 HOXA11P31270 313 aaPredicted RBP17.47■□□□□ 0.39
CDH3-204ENST00000565453 SSTR3P32745 418 aaPredicted RBP17.47■□□□□ 0.39
CDH3-204ENST00000565453 RAB27AP51159 221 aa17.47■□□□□ 0.39
CDH3-204ENST00000565453 RBM10P98175 930 aaKnown RBP17.47■□□□□ 0.39
CDH3-204ENST00000565453 UBXN11Q5T124 520 aa17.47■□□□□ 0.39
CDH3-204ENST00000565453 PLPP4Q5VZY2 271 aa17.47■□□□□ 0.39
CDH3-204ENST00000565453 RNF149Q8NC42 400 aa17.47■□□□□ 0.39
CDH3-204ENST00000565453 SMRP1Q8NCR6 262 aa17.47■□□□□ 0.39
CDH3-204ENST00000565453 C8orf76Q96K31 380 aa17.47■□□□□ 0.39
CDH3-204ENST00000565453 ZSCAN31Q96LW9 406 aaPredicted RBP17.47■□□□□ 0.39
CDH3-204ENST00000565453 CDCA3Q99618 268 aaPredicted RBP17.47■□□□□ 0.39
CDH3-204ENST00000565453 PUF60Q9UHX1 559 aaKnown RBP17.47■□□□□ 0.39
CDH3-204ENST00000565453 BARX2Q9UMQ3 279 aaPredicted RBP17.47■□□□□ 0.39
CDH3-204ENST00000565453 POTEMA6NI47 508 aa17.46■□□□□ 0.39
CDH3-204ENST00000565453 GPR37L1O60883 481 aa17.46■□□□□ 0.39
CDH3-204ENST00000565453 OFD1O75665 1012 aa17.46■□□□□ 0.39
CDH3-204ENST00000565453 SPATA31C1P0DKV0 1188 aa17.46■□□□□ 0.39
CDH3-204ENST00000565453 MCM7P33993 719 aa17.46■□□□□ 0.39
CDH3-204ENST00000565453 BCAR1P56945 870 aa17.46■□□□□ 0.39
CDH3-204ENST00000565453 SAFBQ15424 915 aaKnown RBP eCLIP17.46■□□□□ 0.39
CDH3-204ENST00000565453 LONRF3Q496Y0 759 aa17.46■□□□□ 0.39
CDH3-204ENST00000565453 AGMOQ6ZNB7 445 aa17.46■□□□□ 0.39
CDH3-204ENST00000565453 MRPL10Q7Z7H8 261 aaKnown RBP17.46■□□□□ 0.39
CDH3-204ENST00000565453 IFNLR1Q8IU57 520 aaPredicted RBP17.46■□□□□ 0.39
CDH3-204ENST00000565453 FBXO18Q8NFZ0 1043 aa17.46■□□□□ 0.39
CDH3-204ENST00000565453 TCF25Q9BQ70 676 aa17.46■□□□□ 0.39
CDH3-204ENST00000565453 LRFN3Q9BTN0 628 aa17.46■□□□□ 0.39
CDH3-204ENST00000565453 SH2B1Q9NRF2 756 aaPredicted RBP17.46■□□□□ 0.39
CDH3-204ENST00000565453 TBC1D13Q9NVG8 400 aa17.46■□□□□ 0.39
CDH3-204ENST00000565453 RAPGEFL1Q9UHV5 662 aa17.46■□□□□ 0.39
CDH3-204ENST00000565453 PCDHB2Q9Y5E7 798 aa17.46■□□□□ 0.39
CDH3-204ENST00000565453 FSD2A1L4K1 749 aa17.45■□□□□ 0.38
CDH3-204ENST00000565453 HIDE1A8MVS5 230 aa17.45■□□□□ 0.38
CDH3-204ENST00000565453 DGAT1O75907 488 aa17.45■□□□□ 0.38
CDH3-204ENST00000565453 ATP2B1P20020 1258 aa17.45■□□□□ 0.38
CDH3-204ENST00000565453 ARL2P36404 184 aa17.45■□□□□ 0.38
CDH3-204ENST00000565453 RBM25P49756 843 aaKnown RBP17.45■□□□□ 0.38
CDH3-204ENST00000565453 RARRES1P49788 294 aa17.45■□□□□ 0.38
CDH3-204ENST00000565453 PTENP60484 403 aa17.45■□□□□ 0.38
CDH3-204ENST00000565453 HMGN5P82970 282 aaKnown RBP17.45■□□□□ 0.38
CDH3-204ENST00000565453 KRT17Q04695 432 aa17.45■□□□□ 0.38
CDH3-204ENST00000565453 POU5F1BQ06416 359 aa17.45■□□□□ 0.38
CDH3-204ENST00000565453 NOMO2Q5JPE7 1267 aa17.45■□□□□ 0.38
CDH3-204ENST00000565453 GLB1LQ6UWU2 654 aa17.45■□□□□ 0.38
CDH3-204ENST00000565453 TMEM184AQ6ZMB5 413 aa17.45■□□□□ 0.38
CDH3-204ENST00000565453 ASAP3Q8TDY4 903 aa17.45■□□□□ 0.38
CDH3-204ENST00000565453 PIGOQ8TEQ8 1089 aa17.45■□□□□ 0.38
CDH3-204ENST00000565453 FOXP1Q9H334 677 aaPredicted RBP17.45■□□□□ 0.38
CDH3-204ENST00000565453 NRDE2Q9H7Z3 1164 aa17.45■□□□□ 0.38
CDH3-204ENST00000565453 NGRNQ9NPE2 291 aaKnown RBP17.45■□□□□ 0.38
CDH3-204ENST00000565453 ENTPD7Q9NQZ7 604 aa17.45■□□□□ 0.38
CDH3-204ENST00000565453 A0A087WWV3 80 aa17.44■□□□□ 0.38
CDH3-204ENST00000565453 NT5C1B-RDH14C9J2C7 533 aa17.44■□□□□ 0.38
CDH3-204ENST00000565453 B4GALT3O60512 393 aa17.44■□□□□ 0.38
CDH3-204ENST00000565453 XRCC6P12956 609 aaKnown RBP eCLIP17.44■□□□□ 0.38
CDH3-204ENST00000565453 ORC2Q13416 577 aaPredicted RBP17.44■□□□□ 0.38
CDH3-204ENST00000565453 MXD4Q14582 209 aaPredicted RBP17.44■□□□□ 0.38
CDH3-204ENST00000565453 TMEM31Q5JXX7 168 aa17.44■□□□□ 0.38
CDH3-204ENST00000565453 TMEM173Q86WV6 379 aaPredicted RBP17.44■□□□□ 0.38
CDH3-204ENST00000565453 PGBD4Q96DM1 585 aa17.44■□□□□ 0.38
CDH3-204ENST00000565453 TSPAN1O60635 241 aa17.43■□□□□ 0.38
CDH3-204ENST00000565453 MED24O75448 989 aa17.43■□□□□ 0.38
CDH3-204ENST00000565453 GALTP07902 379 aa17.43■□□□□ 0.38
CDH3-204ENST00000565453 GLRA2P23416 452 aa17.43■□□□□ 0.38
CDH3-204ENST00000565453 ALDH7A1P49419 539 aaKnown RBP17.43■□□□□ 0.38
CDH3-204ENST00000565453 MBTD1Q05BQ5 628 aa17.43■□□□□ 0.38
CDH3-204ENST00000565453 CAPSQ13938 189 aa17.43■□□□□ 0.38
CDH3-204ENST00000565453 PCBP1Q15365 356 aaKnown RBP eCLIP17.43■□□□□ 0.38
CDH3-204ENST00000565453 ZNF174Q15697 407 aa17.43■□□□□ 0.38
CDH3-204ENST00000565453 AMHR2Q16671 573 aa17.43■□□□□ 0.38
CDH3-204ENST00000565453 TMC7Q7Z402 723 aa17.43■□□□□ 0.38
CDH3-204ENST00000565453 CATSPER3Q86XQ3 398 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms