RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 MAMSTRQ6ZN01 415 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 MTSS1LQ765P7 747 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 GET4Q7L5D6 327 aaPredicted RBP10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 ZNF589Q86UQ0 364 aaPredicted RBP10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 CKAP2LQ8IYA6 745 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 OTUD7AQ8TE49 926 aaPredicted RBP10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 RRP36Q96EU6 259 aaKnown RBP10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 MAP7D2Q96T17 732 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 RPP25Q9BUL9 199 aaKnown RBP10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 PRMT8Q9NR22 394 aaPredicted RBP10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 FAM217BQ9NTX9 383 aaPredicted RBP10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 TBC1D13Q9NVG8 400 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 AKT3Q9Y243 479 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 FAN1Q9Y2M0 1017 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 FANCMQ8IYD8 2048 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 ZFYVE26Q68DK2 2539 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 IGKV6D-21A0A0A0MT36 114 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 TMEM8BA6NDV4 472 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 SPDYE3A6NKU9 549 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 C2CD2LO14523 706 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 URODP06132 367 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 FSHRP23945 695 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 SLC11A1P49279 550 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 IRX6P78412 446 aaPredicted RBP10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 ADCY1Q08828 1119 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 MTAPQ13126 283 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 NMIQ13287 307 aaPredicted RBP10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 SEC23AQ15436 765 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 IMMTQ16891 758 aaKnown RBP10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 PARM1Q6UWI2 310 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 ABHD15Q6UXT9 468 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 SMC5Q8IY18 1101 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 ST13P5Q8NFI4 369 aaPredicted RBP10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 BCL7CQ8WUZ0 217 aaPredicted RBP10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 ZNF707Q96C28 371 aaPredicted RBP10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 FAM193BQ96PV7 902 aaPredicted RBP10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 RPS6KC1Q96S38 1066 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 MXRA8Q9BRK3 442 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 VN1R3Q9BXE9 311 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 PRKD2Q9BZL6 878 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 GBP3Q9H0R5 595 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 ADAMTS10Q9H324 1103 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 ZNF302Q9NR11 478 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 ZDHHC7Q9NXF8 308 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 SEC63Q9UGP8 760 aaKnown RBP10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 CDH7Q9ULB5 785 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 CEP131Q9UPN4 1083 aa10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 CNOT1A5YKK6 2376 aaKnown RBP10.27□□□□□ -0.77
VPS9D1-205ENST00000565452 ERICH2A1L162 156 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 C1QTNF9BB2RNN3 333 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 ZBTB42B2RXF5 422 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 TM4SF5O14894 197 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 TEX28O15482 410 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 PAPLNO95428 1278 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 C22orf31O95567 290 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 SOD2P04179 222 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 C1QTNF9P0C862 333 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 SPATA31D3P0C874 917 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 MYBP10242 640 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 KIF5BP33176 963 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 CNR2P34972 360 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 PHKA2P46019 1235 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 CDC42EP1Q00587 391 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 AASDHQ4L235 1098 aaPredicted RBP10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 SWSAP1Q6NVH7 229 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 EFCAB12Q6NXP0 572 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 MIS18BP1Q6P0N0 1132 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 SPATA31D4Q6ZUB0 917 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 URGCPQ8TCY9 931 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 FGF14Q92915 247 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 PGBD4Q96DM1 585 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 SCLT1Q96NL6 688 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 IER2Q9BTL4 223 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 TRAIPQ9BWF2 469 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 KANSL3Q9P2N6 904 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 DNAJB4Q9UDY4 337 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 PCDHA6Q9UN73 950 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 LHX6Q9UPM6 363 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 INPP5FQ9Y2H2 1132 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 PCDHA8Q9Y5H6 950 aa10.26□□□□□ -0.77
VPS9D1-205ENST00000565452 CEP295Q9C0D2 2601 aa10.25□□□□□ -0.77
VPS9D1-205ENST00000565452 OFD1O75665 1012 aa10.25□□□□□ -0.77
VPS9D1-205ENST00000565452 DARSP14868 501 aaKnown RBP10.25□□□□□ -0.77
VPS9D1-205ENST00000565452 TARSP26639 723 aaKnown RBP10.25□□□□□ -0.77
VPS9D1-205ENST00000565452 SMARCA1P28370 1054 aa10.25□□□□□ -0.77
VPS9D1-205ENST00000565452 TPRG1Q6ZUI0 275 aa10.25□□□□□ -0.77
VPS9D1-205ENST00000565452 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.25□□□□□ -0.77
VPS9D1-205ENST00000565452 PALB2Q86YC2 1186 aa10.25□□□□□ -0.77
VPS9D1-205ENST00000565452 ZNF280BQ86YH2 543 aa10.25□□□□□ -0.77
VPS9D1-205ENST00000565452 C12orf50Q8NA57 414 aaPredicted RBP10.25□□□□□ -0.77
VPS9D1-205ENST00000565452 TMEM175Q9BSA9 504 aa10.25□□□□□ -0.77
VPS9D1-205ENST00000565452 RXFP1Q9HBX9 757 aa10.25□□□□□ -0.77
VPS9D1-205ENST00000565452 AGO4Q9HCK5 861 aaKnown RBP10.25□□□□□ -0.77
VPS9D1-205ENST00000565452 ASPMQ8IZT6 3477 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 MAN2B1O00754 1011 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 NRP1O14786 923 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 IFIT3O14879 490 aaKnown RBP10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 ZNF623O75123 536 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 KCNK5O95279 499 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 IGHDP01880 384 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms