RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 PCIF1Q9H4Z3 704 aa21.38■■□□□ 1.01
CLN6-205ENST00000564846 CEP72Q9P209 647 aa21.38■■□□□ 1.01
CLN6-205ENST00000564846 TRPC6Q9Y210 931 aa21.38■■□□□ 1.01
CLN6-205ENST00000564846 ZBTB42B2RXF5 422 aa21.37■■□□□ 1.01
CLN6-205ENST00000564846 TISP43B9A030 160 aa21.37■■□□□ 1.01
CLN6-205ENST00000564846 PPFIA4O75335 1185 aa21.37■■□□□ 1.01
CLN6-205ENST00000564846 CCDC175P0C221 793 aa21.37■■□□□ 1.01
CLN6-205ENST00000564846 KRT13P13646 458 aa21.37■■□□□ 1.01
CLN6-205ENST00000564846 HNRNPH3P31942 346 aaKnown RBP21.37■■□□□ 1.01
CLN6-205ENST00000564846 CDK17Q00537 523 aa21.37■■□□□ 1.01
CLN6-205ENST00000564846 BFSP1Q12934 665 aa21.37■■□□□ 1.01
CLN6-205ENST00000564846 MTF1Q14872 753 aa21.37■■□□□ 1.01
CLN6-205ENST00000564846 WDR59Q6PJI9 974 aa21.37■■□□□ 1.01
CLN6-205ENST00000564846 GBP6Q6ZN66 633 aa21.37■■□□□ 1.01
CLN6-205ENST00000564846 SOCS4Q8WXH5 440 aa21.37■■□□□ 1.01
CLN6-205ENST00000564846 NUCKS1Q9H1E3 243 aaKnown RBP21.37■■□□□ 1.01
CLN6-205ENST00000564846 PLCB1Q9NQ66 1216 aa21.37■■□□□ 1.01
CLN6-205ENST00000564846 PLAGL2Q9UPG8 496 aa21.37■■□□□ 1.01
CLN6-205ENST00000564846 IGKV6-21A0A0C4DH24 114 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.36■■□□□ 1.01
CLN6-205ENST00000564846 KIF2AO00139 706 aaPredicted RBP21.36■■□□□ 1.01
CLN6-205ENST00000564846 LGALS2P05162 132 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 SMPD1P17405 629 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 STRN3Q13033 797 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 EXOC3L4Q17RC7 722 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 AFG1LQ8WV93 481 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 USP6NLQ92738 828 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 CRACR2AQ9BSW2 395 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 LRRIQ4A6NIV6 560 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 ANKRD63C9JTQ0 380 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 HNRNPDLO14979 420 aaKnown RBP21.36■■□□□ 1.01
CLN6-205ENST00000564846 NOL4O94818 638 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 TUBB4AP04350 444 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 TNNT1P13805 278 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 ADSSP30520 456 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 RGS2P41220 211 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 CRHR2Q13324 411 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 TAS1R3Q7RTX0 852 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 RDH13Q8NBN7 331 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 BAP1Q92560 729 aa21.36■■□□□ 1.01
CLN6-205ENST00000564846 CA12O43570 354 aa21.35■■□□□ 1.01
CLN6-205ENST00000564846 GARTP22102 1010 aa21.35■■□□□ 1.01
CLN6-205ENST00000564846 FMO5P49326 533 aa21.35■■□□□ 1.01
CLN6-205ENST00000564846 MXD4Q14582 209 aaPredicted RBP21.35■■□□□ 1.01
CLN6-205ENST00000564846 ZNF484Q5JVG2 852 aa21.35■■□□□ 1.01
CLN6-205ENST00000564846 OLFML2BQ68BL8 750 aa21.35■■□□□ 1.01
CLN6-205ENST00000564846 REXO1L1PQ8IX06 675 aa21.35■■□□□ 1.01
CLN6-205ENST00000564846 PSPC1Q8WXF1 523 aaKnown RBP21.35■■□□□ 1.01
CLN6-205ENST00000564846 CHP1Q99653 195 aa21.35■■□□□ 1.01
CLN6-205ENST00000564846 TMEM134Q9H6X4 195 aa21.35■■□□□ 1.01
CLN6-205ENST00000564846 ADGRG1Q9Y653 693 aa21.35■■□□□ 1.01
CLN6-205ENST00000564846 K7ERI5 159 aa21.34■■□□□ 1.01
CLN6-205ENST00000564846 PON1P27169 355 aa21.34■■□□□ 1.01
CLN6-205ENST00000564846 MCCD1P59942 119 aaPredicted RBP21.34■■□□□ 1.01
CLN6-205ENST00000564846 RRAGAQ7L523 313 aa21.34■■□□□ 1.01
CLN6-205ENST00000564846 OR6J1Q8NGC5 347 aa21.34■■□□□ 1.01
CLN6-205ENST00000564846 PRPF31Q8WWY3 499 aaKnown RBP21.34■■□□□ 1.01
CLN6-205ENST00000564846 BICD1Q96G01 975 aa21.34■■□□□ 1.01
CLN6-205ENST00000564846 SUGCTQ9HAC7 445 aa21.34■■□□□ 1.01
CLN6-205ENST00000564846 ZNF215Q9UL58 517 aaPredicted RBP21.34■■□□□ 1.01
CLN6-205ENST00000564846 TNPO2O14787 897 aaKnown RBP21.33■■□□□ 1.01
CLN6-205ENST00000564846 ADCY3O60266 1144 aa21.33■■□□□ 1.01
CLN6-205ENST00000564846 ALDH1A1P00352 501 aa21.33■■□□□ 1.01
CLN6-205ENST00000564846 PIGRP01833 764 aa21.33■■□□□ 1.01
CLN6-205ENST00000564846 HOXD8P13378 290 aaPredicted RBP21.33■■□□□ 1.01
CLN6-205ENST00000564846 VAMP7P51809 220 aa21.33■■□□□ 1.01
CLN6-205ENST00000564846 TNFAIP2Q03169 654 aa21.33■■□□□ 1.01
CLN6-205ENST00000564846 CAPSQ13938 189 aa21.33■■□□□ 1.01
CLN6-205ENST00000564846 SLC39A4Q6P5W5 647 aa21.33■■□□□ 1.01
CLN6-205ENST00000564846 PDXDC1Q6P996 788 aa21.33■■□□□ 1.01
CLN6-205ENST00000564846 POMGNT1Q8WZA1 660 aa21.33■■□□□ 1.01
CLN6-205ENST00000564846 SYN2Q92777 582 aaPredicted RBP21.33■■□□□ 1.01
CLN6-205ENST00000564846 DESI2Q9BSY9 194 aa21.33■■□□□ 1.01
CLN6-205ENST00000564846 GANQ9H2C0 597 aa21.33■■□□□ 1.01
CLN6-205ENST00000564846 RNPEPQ9H4A4 650 aa21.33■■□□□ 1.01
CLN6-205ENST00000564846 EPN1Q9Y6I3 576 aaPredicted RBP21.33■■□□□ 1.01
CLN6-205ENST00000564846 PHLPP2Q6ZVD8 1323 aa21.33■■□□□ 1.01
CLN6-205ENST00000564846 LRRC53A6NM62 1247 aa21.33■■□□□ 1
CLN6-205ENST00000564846 ECM2O94769 699 aaPredicted RBP21.33■■□□□ 1
CLN6-205ENST00000564846 TOMM70O94826 608 aa21.33■■□□□ 1
CLN6-205ENST00000564846 LIG4P49917 911 aa21.33■■□□□ 1
CLN6-205ENST00000564846 EFNA5P52803 228 aa21.33■■□□□ 1
CLN6-205ENST00000564846 POLR2FP61218 127 aaKnown RBP21.33■■□□□ 1
CLN6-205ENST00000564846 DRP2Q13474 957 aa21.33■■□□□ 1
CLN6-205ENST00000564846 CCDC170Q8IYT3 715 aa21.33■■□□□ 1
CLN6-205ENST00000564846 FBXL18Q96ME1 805 aa21.33■■□□□ 1
CLN6-205ENST00000564846 APBA2Q99767 749 aa21.33■■□□□ 1
CLN6-205ENST00000564846 C16orf70Q9BSU1 422 aa21.33■■□□□ 1
CLN6-205ENST00000564846 GCNT4Q9P109 453 aa21.33■■□□□ 1
CLN6-205ENST00000564846 FBXL5Q9UKA1 691 aa21.33■■□□□ 1
CLN6-205ENST00000564846 GJD2Q9UKL4 321 aa21.33■■□□□ 1
CLN6-205ENST00000564846 KIAA0391O15091 583 aaKnown RBP21.32■■□□□ 1
CLN6-205ENST00000564846 NDUFA10O95299 355 aa21.32■■□□□ 1
CLN6-205ENST00000564846 MMP3P08254 477 aa21.32■■□□□ 1
CLN6-205ENST00000564846 TRIM49P0CI25 452 aa21.32■■□□□ 1
CLN6-205ENST00000564846 TRIM49CP0CI26 452 aa21.32■■□□□ 1
CLN6-205ENST00000564846 SLC9A1P19634 815 aa21.32■■□□□ 1
CLN6-205ENST00000564846 ENPEPQ07075 957 aa21.32■■□□□ 1
CLN6-205ENST00000564846 MKRN4PQ13434 485 aaPredicted RBP21.32■■□□□ 1
CLN6-205ENST00000564846 HSP90AA2PQ14568 343 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms