RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 LAMTOR4Q0VGL1 99 aa16.75■□□□□ 0.27
SPG7-210ENST00000564409 SAFBQ15424 915 aaKnown RBP eCLIP16.75■□□□□ 0.27
SPG7-210ENST00000564409 CALCRLQ16602 461 aa16.75■□□□□ 0.27
SPG7-210ENST00000564409 XKR9Q5GH70 373 aa16.75■□□□□ 0.27
SPG7-210ENST00000564409 EARS2Q5JPH6 523 aaKnown RBP16.75■□□□□ 0.27
SPG7-210ENST00000564409 DIS3L2Q8IYB7 885 aaKnown RBP16.75■□□□□ 0.27
SPG7-210ENST00000564409 SLC39A11Q8N1S5 342 aa16.75■□□□□ 0.27
SPG7-210ENST00000564409 TCF25Q9BQ70 676 aa16.75■□□□□ 0.27
SPG7-210ENST00000564409 C11orf16Q9NQ32 467 aa16.75■□□□□ 0.27
SPG7-210ENST00000564409 ANKEF1Q9NU02 776 aa16.75■□□□□ 0.27
SPG7-210ENST00000564409 AGPAT5Q9NUQ2 364 aa16.75■□□□□ 0.27
SPG7-210ENST00000564409 WRAP73Q9P2S5 460 aaPredicted RBP16.75■□□□□ 0.27
SPG7-210ENST00000564409 BTBD18B2RXH4 712 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 NEMFO60524 1076 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 SLITRK3O94933 977 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 LARGE1O95461 756 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 XRCC6P12956 609 aaKnown RBP eCLIP16.74■□□□□ 0.27
SPG7-210ENST00000564409 HOXB8P17481 243 aaPredicted RBP16.74■□□□□ 0.27
SPG7-210ENST00000564409 BCAR1P56945 870 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 KCNC3Q14003 757 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 GIT2Q14161 759 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 SMC1AQ14683 1233 aaKnown RBP16.74■□□□□ 0.27
SPG7-210ENST00000564409 EMC2Q15006 297 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 NOMO2Q5JPE7 1267 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 TMC7Q7Z402 723 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 FERMT3Q86UX7 667 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 KSR1Q8IVT5 923 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 TPH2Q8IWU9 490 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 CNNM3Q8NE01 707 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 TMEM169Q96HH4 297 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 DYDC2Q96IM9 177 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 HSD17B14Q9BPX1 270 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 LLPHQ9BRT6 129 aaKnown RBP16.74■□□□□ 0.27
SPG7-210ENST00000564409 TTC12Q9H892 705 aaPredicted RBP16.74■□□□□ 0.27
SPG7-210ENST00000564409 RGL1Q9NZL6 768 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 KANSL3Q9P2N6 904 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 LIMCH1Q9UPQ0 1083 aa16.74■□□□□ 0.27
SPG7-210ENST00000564409 CNTNAP2Q9UHC6 1331 aa16.73■□□□□ 0.27
SPG7-210ENST00000564409 FAM205CA6NFA0 338 aa16.73■□□□□ 0.27
SPG7-210ENST00000564409 DGAT1O75907 488 aa16.73■□□□□ 0.27
SPG7-210ENST00000564409 SRGAP2CP0DJJ0 459 aa16.73■□□□□ 0.27
SPG7-210ENST00000564409 AXLP30530 894 aa16.73■□□□□ 0.27
SPG7-210ENST00000564409 NCBP1Q09161 790 aaKnown RBP16.73■□□□□ 0.27
SPG7-210ENST00000564409 ORC2Q13416 577 aaPredicted RBP16.73■□□□□ 0.27
SPG7-210ENST00000564409 TFDP1Q14186 410 aa16.73■□□□□ 0.27
SPG7-210ENST00000564409 HERC4Q5GLZ8 1057 aaPredicted RBP16.73■□□□□ 0.27
SPG7-210ENST00000564409 PLPP4Q5VZY2 271 aa16.73■□□□□ 0.27
SPG7-210ENST00000564409 MRPL10Q7Z7H8 261 aaKnown RBP16.73■□□□□ 0.27
SPG7-210ENST00000564409 MRPL43Q8N983 215 aaKnown RBP16.73■□□□□ 0.27
SPG7-210ENST00000564409 ZNF579Q8NAF0 562 aaKnown RBP16.73■□□□□ 0.27
SPG7-210ENST00000564409 TMEM143Q96AN5 459 aa16.73■□□□□ 0.27
SPG7-210ENST00000564409 CCDC51Q96ER9 411 aa16.73■□□□□ 0.27
SPG7-210ENST00000564409 MTRQ99707 1265 aa16.73■□□□□ 0.27
SPG7-210ENST00000564409 EIF2AK1Q9BQI3 630 aaKnown RBP16.73■□□□□ 0.27
SPG7-210ENST00000564409 UBN1Q9NPG3 1134 aa16.73■□□□□ 0.27
SPG7-210ENST00000564409 BARX2Q9UMQ3 279 aaPredicted RBP16.73■□□□□ 0.27
SPG7-210ENST00000564409 USP15Q9Y4E8 981 aaPredicted RBP16.73■□□□□ 0.27
SPG7-210ENST00000564409 PCDHB2Q9Y5E7 798 aa16.73■□□□□ 0.27
SPG7-210ENST00000564409 PCDHGC5Q9Y5F6 944 aa16.73■□□□□ 0.27
SPG7-210ENST00000564409 PER2O15055 1255 aa16.72■□□□□ 0.27
SPG7-210ENST00000564409 PLA2G5P39877 138 aa16.72■□□□□ 0.27
SPG7-210ENST00000564409 CYP4A11Q02928 519 aa16.72■□□□□ 0.27
SPG7-210ENST00000564409 RNASELQ05823 741 aaKnown RBP16.72■□□□□ 0.27
SPG7-210ENST00000564409 CTTNQ14247 550 aaKnown RBP16.72■□□□□ 0.27
SPG7-210ENST00000564409 IFNLR1Q8IU57 520 aaPredicted RBP16.72■□□□□ 0.27
SPG7-210ENST00000564409 RNF149Q8NC42 400 aa16.72■□□□□ 0.27
SPG7-210ENST00000564409 URGCPQ8TCY9 931 aa16.72■□□□□ 0.27
SPG7-210ENST00000564409 SUSD6Q92537 303 aa16.72■□□□□ 0.27
SPG7-210ENST00000564409 CASP10Q92851 521 aa16.72■□□□□ 0.27
SPG7-210ENST00000564409 CCDC43Q96MW1 224 aaKnown RBP16.72■□□□□ 0.27
SPG7-210ENST00000564409 MTMR9Q96QG7 549 aa16.72■□□□□ 0.27
SPG7-210ENST00000564409 PHF7Q9BWX1 381 aaPredicted RBP16.72■□□□□ 0.27
SPG7-210ENST00000564409 TBC1D13Q9NVG8 400 aa16.72■□□□□ 0.27
SPG7-210ENST00000564409 IRAK3Q9Y616 596 aa16.72■□□□□ 0.27
SPG7-210ENST00000564409 LOC730098B7Z3J9 87 aa16.71■□□□□ 0.27
SPG7-210ENST00000564409 JAK2O60674 1132 aa16.71■□□□□ 0.27
SPG7-210ENST00000564409 OFD1O75665 1012 aa16.71■□□□□ 0.27
SPG7-210ENST00000564409 ERLIN2O94905 339 aa16.71■□□□□ 0.27
SPG7-210ENST00000564409 PTENP60484 403 aa16.71■□□□□ 0.27
SPG7-210ENST00000564409 CBX2Q14781 532 aaPredicted RBP16.71■□□□□ 0.27
SPG7-210ENST00000564409 TPRNQ4KMQ1 711 aa16.71■□□□□ 0.27
SPG7-210ENST00000564409 ANKRD54Q6NXT1 300 aa16.71■□□□□ 0.27
SPG7-210ENST00000564409 DDX53Q86TM3 631 aaKnown RBP16.71■□□□□ 0.27
SPG7-210ENST00000564409 RNF135Q8IUD6 432 aa16.71■□□□□ 0.27
SPG7-210ENST00000564409 VN1R2Q8NFZ6 395 aa16.71■□□□□ 0.27
SPG7-210ENST00000564409 FAM122AQ96E09 287 aa16.71■□□□□ 0.27
SPG7-210ENST00000564409 ZSCAN31Q96LW9 406 aaPredicted RBP16.71■□□□□ 0.27
SPG7-210ENST00000564409 NFKBIZQ9BYH8 718 aa16.71■□□□□ 0.27
SPG7-210ENST00000564409 DAXXQ9UER7 740 aaPredicted RBP16.71■□□□□ 0.27
SPG7-210ENST00000564409 FAM86C2PA6NEL3 165 aa16.7■□□□□ 0.26
SPG7-210ENST00000564409 C2orf71A6NGG8 1288 aa16.7■□□□□ 0.26
SPG7-210ENST00000564409 HIDE1A8MVS5 230 aa16.7■□□□□ 0.26
SPG7-210ENST00000564409 ZC3H11AO75152 810 aaKnown RBP eCLIP16.7■□□□□ 0.26
SPG7-210ENST00000564409 CENPBP07199 599 aaPredicted RBP16.7■□□□□ 0.26
SPG7-210ENST00000564409 HOXA11P31270 313 aaPredicted RBP16.7■□□□□ 0.26
SPG7-210ENST00000564409 PBX3P40426 434 aa16.7■□□□□ 0.26
SPG7-210ENST00000564409 TECP42680 631 aa16.7■□□□□ 0.26
SPG7-210ENST00000564409 TXKP42681 527 aa16.7■□□□□ 0.26
SPG7-210ENST00000564409 HMGN5P82970 282 aaKnown RBP16.7■□□□□ 0.26
SPG7-210ENST00000564409 LPPQ93052 612 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms