RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 FAM167AQ96KS9 214 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 C17orf75Q9HAS0 396 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 CREBZFQ9NS37 354 aa19.35■□□□□ 0.69
GDE1-203ENST00000564172 ZMYM2Q9UBW7 1377 aa19.34■□□□□ 0.69
GDE1-203ENST00000564172 TUBB4AP04350 444 aa19.34■□□□□ 0.69
GDE1-203ENST00000564172 TPM1P09493 284 aa19.34■□□□□ 0.69
GDE1-203ENST00000564172 SMPD1P17405 629 aa19.34■□□□□ 0.69
GDE1-203ENST00000564172 NR2F2P24468 414 aa19.34■□□□□ 0.69
GDE1-203ENST00000564172 MARK3P27448 753 aa19.34■□□□□ 0.69
GDE1-203ENST00000564172 RGS2P41220 211 aa19.34■□□□□ 0.69
GDE1-203ENST00000564172 IRX1P78414 480 aaPredicted RBP19.34■□□□□ 0.69
GDE1-203ENST00000564172 ALCAMQ13740 583 aa19.34■□□□□ 0.69
GDE1-203ENST00000564172 DUSP28Q4G0W2 176 aa19.34■□□□□ 0.69
GDE1-203ENST00000564172 IQSEC1Q6DN90 963 aa19.34■□□□□ 0.69
GDE1-203ENST00000564172 LRRC8AQ8IWT6 810 aa19.34■□□□□ 0.69
GDE1-203ENST00000564172 SOCS4Q8WXH5 440 aa19.34■□□□□ 0.69
GDE1-203ENST00000564172 IKZF4Q9H2S9 585 aa19.34■□□□□ 0.69
GDE1-203ENST00000564172 ST6GALNAC4Q9H4F1 302 aa19.34■□□□□ 0.69
GDE1-203ENST00000564172 SMARCAD1Q9H4L7 1026 aa19.34■□□□□ 0.69
GDE1-203ENST00000564172 LGALS16A8MUM7 142 aa19.33■□□□□ 0.69
GDE1-203ENST00000564172 H0YHG0 523 aa19.33■□□□□ 0.69
GDE1-203ENST00000564172 CETN3O15182 167 aa19.33■□□□□ 0.69
GDE1-203ENST00000564172 NPTX2P47972 431 aa19.33■□□□□ 0.69
GDE1-203ENST00000564172 NCKAP1LP55160 1127 aa19.33■□□□□ 0.69
GDE1-203ENST00000564172 RTP1P59025 263 aa19.33■□□□□ 0.69
GDE1-203ENST00000564172 SARNPP82979 210 aaKnown RBP19.33■□□□□ 0.69
GDE1-203ENST00000564172 EMC2Q15006 297 aa19.33■□□□□ 0.69
GDE1-203ENST00000564172 CCL14Q16627 93 aa19.33■□□□□ 0.69
GDE1-203ENST00000564172 PRAMEF19Q5SWL8 479 aa19.33■□□□□ 0.69
GDE1-203ENST00000564172 HAUS6Q7Z4H7 955 aa19.33■□□□□ 0.69
GDE1-203ENST00000564172 ZNF784Q8NCA9 323 aaPredicted RBP19.33■□□□□ 0.69
GDE1-203ENST00000564172 NTPCRQ9BSD7 190 aaKnown RBP19.33■□□□□ 0.69
GDE1-203ENST00000564172 OAS2P29728 719 aaKnown RBP19.33■□□□□ 0.68
GDE1-203ENST00000564172 SLC26A2P50443 739 aa19.33■□□□□ 0.68
GDE1-203ENST00000564172 SMTNP53814 917 aa19.33■□□□□ 0.68
GDE1-203ENST00000564172 GTF2BQ00403 316 aa19.33■□□□□ 0.68
GDE1-203ENST00000564172 UBXN1Q04323 297 aa19.33■□□□□ 0.68
GDE1-203ENST00000564172 TBX2Q13207 712 aaPredicted RBP19.33■□□□□ 0.68
GDE1-203ENST00000564172 DMP1Q13316 513 aaPredicted RBP19.33■□□□□ 0.68
GDE1-203ENST00000564172 MIIPQ5JXC2 388 aa19.33■□□□□ 0.68
GDE1-203ENST00000564172 SLC17A8Q8NDX2 589 aa19.33■□□□□ 0.68
GDE1-203ENST00000564172 PPTC7Q8NI37 304 aa19.33■□□□□ 0.68
GDE1-203ENST00000564172 ATP8B4Q8TF62 1192 aa19.33■□□□□ 0.68
GDE1-203ENST00000564172 AFG1LQ8WV93 481 aa19.33■□□□□ 0.68
GDE1-203ENST00000564172 BSNDQ8WZ55 320 aa19.33■□□□□ 0.68
GDE1-203ENST00000564172 NOC4LQ9BVI4 516 aaKnown RBP19.33■□□□□ 0.68
GDE1-203ENST00000564172 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.33■□□□□ 0.68
GDE1-203ENST00000564172 PES1O00541 588 aaKnown RBP19.32■□□□□ 0.68
GDE1-203ENST00000564172 SLC16A4O15374 487 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 GNA14O95837 355 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 APLP1P51693 650 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 LRMPQ12912 555 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 IRF5Q13568 498 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 PLCB4Q15147 1175 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 SPIRE2Q8WWL2 714 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 SLC7A3Q8WY07 619 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 GBP3Q9H0R5 595 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 CCDC169A6NNP5 214 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 CLIC2O15247 247 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 NR3C1P04150 777 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 RFC5P40937 340 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 MARSP56192 900 aaKnown RBP19.32■□□□□ 0.68
GDE1-203ENST00000564172 OLFML2BQ68BL8 750 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 ARMCX5Q6P1M9 558 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 CALR3Q96L12 384 aaKnown RBP19.32■□□□□ 0.68
GDE1-203ENST00000564172 APBA2Q99767 749 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 POLR3FQ9H1D9 316 aaPredicted RBP19.32■□□□□ 0.68
GDE1-203ENST00000564172 ADAM21Q9UKJ8 722 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 ARID2Q68CP9 1835 aa19.32■□□□□ 0.68
GDE1-203ENST00000564172 A0A087WUV0 522 aaPredicted RBP19.31■□□□□ 0.68
GDE1-203ENST00000564172 ADCY6O43306 1168 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 RPL13P26373 211 aaKnown RBP19.31■□□□□ 0.68
GDE1-203ENST00000564172 DNM2P50570 870 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 NFIL3Q16649 462 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 MAN2A1Q16706 1144 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 CCDC40Q4G0X9 1142 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 HS2ST1Q7LGA3 356 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 TMEM161BQ8NDZ6 487 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 FAM107BQ9H098 131 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 TMEM206Q9H813 350 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 KMT5AQ9NQR1 393 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 PPME1Q9Y570 386 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 PPFIA4O75335 1185 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 MAFO75444 373 aaPredicted RBP19.31■□□□□ 0.68
GDE1-203ENST00000564172 IGHA2P01877 340 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 LGALS2P05162 132 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 ZNF865P0CJ78 1059 aaPredicted RBP19.31■□□□□ 0.68
GDE1-203ENST00000564172 PSMC4P43686 418 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 TNFAIP2Q03169 654 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 REM2Q8IYK8 340 aaPredicted RBP19.31■□□□□ 0.68
GDE1-203ENST00000564172 SYCP3Q8IZU3 236 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 TMEM143Q96AN5 459 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 BORCS6Q96GS4 357 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 ACCSQ96QU6 501 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 KIFC3Q9BVG8 833 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 ERAP1Q9NZ08 941 aa19.31■□□□□ 0.68
GDE1-203ENST00000564172 YY1P25490 414 aa19.3■□□□□ 0.68
GDE1-203ENST00000564172 FCGRTP55899 365 aa19.3■□□□□ 0.68
GDE1-203ENST00000564172 LACTBP83111 547 aaPredicted RBP19.3■□□□□ 0.68
GDE1-203ENST00000564172 TBC1D8BQ0IIM8 1120 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms