RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 VEGFAP15692 232 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-209ENST00000564068 BASP1P80723 227 aaKnown RBP13.5□□□□□ -0.25
COMMD4-209ENST00000564068 GRAMD1BQ3KR37 738 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 KIAA0825Q8IV33 1275 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 C4orf33Q8N1A6 199 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 RNF25Q96BH1 459 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-209ENST00000564068 ZNF512BQ96KM6 892 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-209ENST00000564068 FAM161BQ96MY7 647 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 NUP85Q9BW27 656 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 ATP6V0A4Q9HBG4 840 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 SERPINB13Q9UIV8 391 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 ALG6Q9Y672 507 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 WNT7AO00755 349 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 TRAPPC3O43617 180 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 CTCFP49711 727 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-209ENST00000564068 LMNB2Q03252 620 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 TRPC3Q13507 836 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 PREPLQ4J6C6 727 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-209ENST00000564068 MEI1Q5TIA1 1274 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 FAM118BQ9BPY3 351 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 MXD3Q9BW11 206 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 ANAPC4Q9UJX5 808 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 GOLGA8RI6L899 631 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 SEPT6Q14141 434 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 RBM26Q5T8P6 1007 aaKnown RBP13.5□□□□□ -0.25
COMMD4-209ENST00000564068 SMC1BQ8NDV3 1235 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 PIP4K2CQ8TBX8 421 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 RBM17Q96I25 401 aaKnown RBP13.5□□□□□ -0.25
COMMD4-209ENST00000564068 PLA2G12BQ9BX93 195 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 FAM129AQ9BZQ8 928 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 DHX36Q9H2U1 1008 aaKnown RBP13.5□□□□□ -0.25
COMMD4-209ENST00000564068 SEMA4AQ9H3S1 761 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 GINM1Q9NU53 330 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 BSDC1Q9NW68 430 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-209ENST00000564068 FAF1Q9UNN5 650 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-209ENST00000564068 TRPC6Q9Y210 931 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 CLDN3O15551 220 aa13.49□□□□□ -0.25
COMMD4-209ENST00000564068 ICA1Q05084 483 aa13.49□□□□□ -0.25
COMMD4-209ENST00000564068 DNAJC3Q13217 504 aa13.49□□□□□ -0.25
COMMD4-209ENST00000564068 MED15Q96RN5 788 aa13.49□□□□□ -0.25
COMMD4-209ENST00000564068 KDM4CQ9H3R0 1056 aa13.49□□□□□ -0.25
COMMD4-209ENST00000564068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.49□□□□□ -0.25
COMMD4-209ENST00000564068 USP17L10C9JJH3 530 aa13.49□□□□□ -0.25
COMMD4-209ENST00000564068 FOSP01100 380 aaPredicted RBP13.49□□□□□ -0.25
COMMD4-209ENST00000564068 CERKLQ49MI3 558 aaPredicted RBP13.49□□□□□ -0.25
COMMD4-209ENST00000564068 DNAJC9Q8WXX5 260 aa13.49□□□□□ -0.25
COMMD4-209ENST00000564068 NSUN4Q96CB9 384 aaKnown RBP13.49□□□□□ -0.25
COMMD4-209ENST00000564068 OSGEPQ9NPF4 335 aa13.49□□□□□ -0.25
COMMD4-209ENST00000564068 LMNAP02545 664 aaKnown RBP13.49□□□□□ -0.25
COMMD4-209ENST00000564068 TARSP26639 723 aaKnown RBP13.49□□□□□ -0.25
COMMD4-209ENST00000564068 NMT1P30419 496 aaKnown RBP13.49□□□□□ -0.25
COMMD4-209ENST00000564068 IFI35P80217 286 aaPredicted RBP13.49□□□□□ -0.25
COMMD4-209ENST00000564068 MTM1Q13496 603 aa13.49□□□□□ -0.25
COMMD4-209ENST00000564068 KIAA0895Q8NCT3 520 aa13.49□□□□□ -0.25
COMMD4-209ENST00000564068 ZNF507Q8TCN5 953 aa13.49□□□□□ -0.25
COMMD4-209ENST00000564068 TBC1D22AQ8WUA7 517 aa13.49□□□□□ -0.25
COMMD4-209ENST00000564068 SMYD3Q9H7B4 428 aa13.49□□□□□ -0.25
COMMD4-209ENST00000564068 ANGPTL2Q9UKU9 493 aa13.49□□□□□ -0.25
COMMD4-209ENST00000564068 F8VZ95 297 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 KRT1P04264 644 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 TMED1Q13445 227 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 LRRC36Q1X8D7 754 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 FRMD5Q7Z6J6 570 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 CLEC10AQ8IUN9 316 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 C3orf20Q8ND61 904 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 C18orf8Q96DM3 657 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 IWS1Q96ST2 819 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 INTS2Q9H0H0 1204 aaKnown RBP13.48□□□□□ -0.25
COMMD4-209ENST00000564068 GDF3Q9NR23 364 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 HNRNPDLO14979 420 aaKnown RBP13.48□□□□□ -0.25
COMMD4-209ENST00000564068 SORBS3O60504 671 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 ITGB3BPQ13352 177 aaPredicted RBP13.48□□□□□ -0.25
COMMD4-209ENST00000564068 PDIA5Q14554 519 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 R3HDM1Q15032 1099 aaKnown RBP13.48□□□□□ -0.25
COMMD4-209ENST00000564068 C12orf60Q5U649 245 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 TBC1D9BQ66K14 1250 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 SUCLA2Q9P2R7 463 aaPredicted RBP13.48□□□□□ -0.25
COMMD4-209ENST00000564068 hCG_1984214I3L0E3 225 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 ATMINO43313 823 aaPredicted RBP13.48□□□□□ -0.25
COMMD4-209ENST00000564068 CPP00450 1065 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 KITP10721 976 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 CENPUQ71F23 418 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 RNF168Q8IYW5 571 aaPredicted RBP13.48□□□□□ -0.25
COMMD4-209ENST00000564068 ZNF713Q8N859 430 aaPredicted RBP13.48□□□□□ -0.25
COMMD4-209ENST00000564068 SPDYE1Q8NFV5 336 aaPredicted RBP13.48□□□□□ -0.25
COMMD4-209ENST00000564068 PPP4R1Q8TF05 950 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 TEKT4Q8WW24 435 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 PRCCQ92733 491 aaPredicted RBP13.48□□□□□ -0.25
COMMD4-209ENST00000564068 IFT122Q9HBG6 1241 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 NPHS2Q9NP85 383 aa13.48□□□□□ -0.25
COMMD4-209ENST00000564068 G3BP2Q9UN86 482 aaKnown RBP13.48□□□□□ -0.25
COMMD4-209ENST00000564068 NOL3O60936 208 aaKnown RBP13.47□□□□□ -0.25
COMMD4-209ENST00000564068 PHF2O75151 1096 aa13.47□□□□□ -0.25
COMMD4-209ENST00000564068 KRT19P08727 400 aa13.47□□□□□ -0.25
COMMD4-209ENST00000564068 SETSIPP0DME0 302 aa13.47□□□□□ -0.25
COMMD4-209ENST00000564068 EPHB1P54762 984 aa13.47□□□□□ -0.25
COMMD4-209ENST00000564068 PPP2R5CQ13362 524 aa13.47□□□□□ -0.25
COMMD4-209ENST00000564068 SCYL2Q6P3W7 929 aa13.47□□□□□ -0.25
COMMD4-209ENST00000564068 ZNF571Q7Z3V5 609 aaPredicted RBP13.47□□□□□ -0.25
COMMD4-209ENST00000564068 IRF2BP1Q8IU81 584 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms