RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 TMEM60Q9H2L4 133 aa19.72■□□□□ 0.75
NME3-205ENST00000563854 IFT122Q9HBG6 1241 aa19.72■□□□□ 0.75
NME3-205ENST00000563854 FAM105AQ9NUU6 356 aa19.72■□□□□ 0.75
NME3-205ENST00000563854 PUF60Q9UHX1 559 aaKnown RBP19.72■□□□□ 0.75
NME3-205ENST00000563854 BARX2Q9UMQ3 279 aaPredicted RBP19.72■□□□□ 0.75
NME3-205ENST00000563854 MBTPS2O43462 519 aa19.71■□□□□ 0.75
NME3-205ENST00000563854 GAS2O43903 313 aaKnown RBP19.71■□□□□ 0.75
NME3-205ENST00000563854 SKIP12755 728 aa19.71■□□□□ 0.75
NME3-205ENST00000563854 KRT17Q04695 432 aa19.71■□□□□ 0.75
NME3-205ENST00000563854 SMAD4Q13485 552 aaKnown RBP19.71■□□□□ 0.75
NME3-205ENST00000563854 ZSCAN31Q96LW9 406 aaPredicted RBP19.71■□□□□ 0.75
NME3-205ENST00000563854 LLPHQ9BRT6 129 aaKnown RBP19.71■□□□□ 0.75
NME3-205ENST00000563854 MINDY3Q9H8M7 445 aa19.71■□□□□ 0.75
NME3-205ENST00000563854 AGPAT5Q9NUQ2 364 aa19.71■□□□□ 0.75
NME3-205ENST00000563854 SPG21Q9NZD8 308 aa19.71■□□□□ 0.75
NME3-205ENST00000563854 A0A087WWV3 80 aa19.7■□□□□ 0.74
NME3-205ENST00000563854 MEIS3P2A8K0S8 358 aa19.7■□□□□ 0.74
NME3-205ENST00000563854 NT5C1B-RDH14C9J2C7 533 aa19.7■□□□□ 0.74
NME3-205ENST00000563854 ZC3H11AO75152 810 aaKnown RBP eCLIP19.7■□□□□ 0.745e-7■□□□□ 8.5
NME3-205ENST00000563854 RAB27AP51159 221 aa19.7■□□□□ 0.74
NME3-205ENST00000563854 RBM10P98175 930 aaKnown RBP19.7■□□□□ 0.74
NME3-205ENST00000563854 ZNF174Q15697 407 aa19.7■□□□□ 0.74
NME3-205ENST00000563854 GLB1LQ6UWU2 654 aa19.7■□□□□ 0.74
NME3-205ENST00000563854 SRGAP1Q7Z6B7 1085 aa19.7■□□□□ 0.74
NME3-205ENST00000563854 FERMT3Q86UX7 667 aa19.7■□□□□ 0.74
NME3-205ENST00000563854 PIGOQ8TEQ8 1089 aa19.7■□□□□ 0.74
NME3-205ENST00000563854 MTMR9Q96QG7 549 aa19.7■□□□□ 0.74
NME3-205ENST00000563854 GBP3Q9H0R5 595 aa19.7■□□□□ 0.74
NME3-205ENST00000563854 XPNPEP1Q9NQW7 623 aa19.7■□□□□ 0.74
NME3-205ENST00000563854 RAPGEFL1Q9UHV5 662 aa19.7■□□□□ 0.74
NME3-205ENST00000563854 FAM86C2PA6NEL3 165 aa19.69■□□□□ 0.74
NME3-205ENST00000563854 USO1O60763 962 aaKnown RBP19.69■□□□□ 0.74
NME3-205ENST00000563854 ERLIN2O94905 339 aa19.69■□□□□ 0.74
NME3-205ENST00000563854 GLP2RO95838 553 aa19.69■□□□□ 0.74
NME3-205ENST00000563854 BCAR1P56945 870 aa19.69■□□□□ 0.74
NME3-205ENST00000563854 HMGN5P82970 282 aaKnown RBP19.69■□□□□ 0.74
NME3-205ENST00000563854 PLCB3Q01970 1234 aa19.69■□□□□ 0.74
NME3-205ENST00000563854 RNASELQ05823 741 aaKnown RBP19.69■□□□□ 0.74
NME3-205ENST00000563854 ZP2Q05996 745 aa19.69■□□□□ 0.74
NME3-205ENST00000563854 LLGL2Q6P1M3 1020 aa19.69■□□□□ 0.74
NME3-205ENST00000563854 TMC7Q7Z402 723 aa19.69■□□□□ 0.74
NME3-205ENST00000563854 KIF2CQ99661 725 aa19.69■□□□□ 0.74
NME3-205ENST00000563854 HSD17B14Q9BPX1 270 aa19.69■□□□□ 0.74
NME3-205ENST00000563854 SH2B1Q9NRF2 756 aaPredicted RBP19.69■□□□□ 0.74
NME3-205ENST00000563854 ANKEF1Q9NU02 776 aa19.69■□□□□ 0.74
NME3-205ENST00000563854 CLEC1BQ9P126 229 aa19.69■□□□□ 0.74
NME3-205ENST00000563854 LZTS1Q9Y250 596 aa19.69■□□□□ 0.74
NME3-205ENST00000563854 PCDHB2Q9Y5E7 798 aa19.69■□□□□ 0.74
NME3-205ENST00000563854 FSCN2O14926 492 aa19.68■□□□□ 0.74
NME3-205ENST00000563854 ASAP2O43150 1006 aa19.68■□□□□ 0.74
NME3-205ENST00000563854 LYPLA2O95372 231 aa19.68■□□□□ 0.74
NME3-205ENST00000563854 ALDH7A1P49419 539 aaKnown RBP19.68■□□□□ 0.74
NME3-205ENST00000563854 TFDP1Q14186 410 aa19.68■□□□□ 0.74
NME3-205ENST00000563854 SMAD2Q15796 467 aaKnown RBP19.68■□□□□ 0.74
NME3-205ENST00000563854 DUSP6Q16828 381 aa19.68■□□□□ 0.74
NME3-205ENST00000563854 NOMO2Q5JPE7 1267 aa19.68■□□□□ 0.74
NME3-205ENST00000563854 PDE12Q6L8Q7 609 aaKnown RBP19.68■□□□□ 0.74
NME3-205ENST00000563854 MAEAQ7L5Y9 396 aa19.68■□□□□ 0.74
NME3-205ENST00000563854 ADHFE1Q8IWW8 467 aa19.68■□□□□ 0.74
NME3-205ENST00000563854 SLC39A11Q8N1S5 342 aa19.68■□□□□ 0.74
NME3-205ENST00000563854 PGBD4Q96DM1 585 aa19.68■□□□□ 0.74
NME3-205ENST00000563854 MSLNLQ96KJ4 702 aa19.68■□□□□ 0.74
NME3-205ENST00000563854 TRAIPQ9BWF2 469 aa19.68■□□□□ 0.74
NME3-205ENST00000563854 PRKAG3Q9UGI9 489 aa19.68■□□□□ 0.74
NME3-205ENST00000563854 HIDE1A8MVS5 230 aa19.67■□□□□ 0.74
NME3-205ENST00000563854 INO80B-WBP1J3KQ70 363 aa19.67■□□□□ 0.74
NME3-205ENST00000563854 DGAT1O75907 488 aa19.67■□□□□ 0.74
NME3-205ENST00000563854 OR52Z1P0C646 297 aa19.67■□□□□ 0.74
NME3-205ENST00000563854 TECP42680 631 aa19.67■□□□□ 0.74
NME3-205ENST00000563854 RARRES1P49788 294 aa19.67■□□□□ 0.74
NME3-205ENST00000563854 MXD4Q14582 209 aaPredicted RBP19.67■□□□□ 0.74
NME3-205ENST00000563854 TTC38Q5R3I4 469 aa19.67■□□□□ 0.74
NME3-205ENST00000563854 URGCPQ8TCY9 931 aa19.67■□□□□ 0.74
NME3-205ENST00000563854 ASAP3Q8TDY4 903 aa19.67■□□□□ 0.74
NME3-205ENST00000563854 TMEM169Q96HH4 297 aa19.67■□□□□ 0.74
NME3-205ENST00000563854 CDCA3Q99618 268 aaPredicted RBP19.67■□□□□ 0.74
NME3-205ENST00000563854 POLR3FQ9H1D9 316 aaPredicted RBP19.67■□□□□ 0.74
NME3-205ENST00000563854 FOXP1Q9H334 677 aaPredicted RBP19.67■□□□□ 0.74
NME3-205ENST00000563854 TBC1D13Q9NVG8 400 aa19.67■□□□□ 0.74
NME3-205ENST00000563854 RBM25P49756 843 aaKnown RBP19.66■□□□□ 0.74
NME3-205ENST00000563854 CAPSQ13938 189 aa19.66■□□□□ 0.74
NME3-205ENST00000563854 NBR1Q14596 966 aa19.66■□□□□ 0.74
NME3-205ENST00000563854 TMEM31Q5JXX7 168 aa19.66■□□□□ 0.74
NME3-205ENST00000563854 FBXO18Q8NFZ0 1043 aa19.66■□□□□ 0.74
NME3-205ENST00000563854 VN1R2Q8NFZ6 395 aa19.66■□□□□ 0.74
NME3-205ENST00000563854 CPB2Q96IY4 423 aa19.66■□□□□ 0.74
NME3-205ENST00000563854 POP1Q99575 1024 aaKnown RBP19.66■□□□□ 0.74
NME3-205ENST00000563854 APOL5Q9BWW9 433 aa19.66■□□□□ 0.74
NME3-205ENST00000563854 NGRNQ9NPE2 291 aaKnown RBP19.66■□□□□ 0.74
NME3-205ENST00000563854 NOL7Q9UMY1 257 aaKnown RBP19.66■□□□□ 0.74
NME3-205ENST00000563854 TSPAN1O60635 241 aa19.65■□□□□ 0.74
NME3-205ENST00000563854 ZNF623O75123 536 aa19.65■□□□□ 0.74
NME3-205ENST00000563854 MED24O75448 989 aa19.65■□□□□ 0.74
NME3-205ENST00000563854 OFD1O75665 1012 aa19.65■□□□□ 0.74
NME3-205ENST00000563854 SRGAP2BP0DMP2 458 aa19.65■□□□□ 0.74
NME3-205ENST00000563854 HOXA11P31270 313 aaPredicted RBP19.65■□□□□ 0.74
NME3-205ENST00000563854 SMC1AQ14683 1233 aaKnown RBP19.65■□□□□ 0.74
NME3-205ENST00000563854 UBXN11Q5T124 520 aa19.65■□□□□ 0.74
NME3-205ENST00000563854 POTEGQ6S5H5 508 aa19.65■□□□□ 0.74
NME3-205ENST00000563854 AGMOQ6ZNB7 445 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms