RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 UBL4BQ8N7F7 174 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 LMO3Q8TAP4 145 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 ATP8B4Q8TF62 1192 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 CHURC1Q8WUH1 139 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 TLCD1Q96CP7 247 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 CYFIP2Q96F07 1278 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 RUNDC3BQ96NL0 473 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 RPS6KC1Q96S38 1066 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 RIT2Q99578 217 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 CELF4Q9BZC1 486 aaKnown RBP14.16□□□□□ -0.14
USB1-207ENST00000563149 RANBP17Q9H2T7 1088 aaKnown RBP14.16□□□□□ -0.14
USB1-207ENST00000563149 ACTR5Q9H9F9 607 aaPredicted RBP14.16□□□□□ -0.14
USB1-207ENST00000563149 POLD4Q9HCU8 107 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 GOPCQ9HD26 462 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 PARP2Q9UGN5 583 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 NOVA2Q9UNW9 492 aaKnown RBP14.16□□□□□ -0.14
USB1-207ENST00000563149 USP20Q9Y2K6 914 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 CAPN7Q9Y6W3 813 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 ZNF646O15015 1829 aaPredicted RBP14.15□□□□□ -0.14
USB1-207ENST00000563149 A0A1W2PRG0 241 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 ARHGEF35A5YM69 484 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 PODXLO00592 558 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 ABCB4P21439 1286 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 CHRNA3P32297 505 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 KRT71Q3SY84 523 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 KIAA1755Q5JYT7 1200 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 SWT1Q5T5J6 900 aaKnown RBP14.15□□□□□ -0.14
USB1-207ENST00000563149 DCAF12L1Q5VU92 463 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 SYCP3Q8IZU3 236 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 P3H4Q92791 437 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 KAT2BQ92831 832 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 ARHGEF26Q96DR7 871 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 PSMD1Q99460 953 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 ZNF577Q9BSK1 485 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 THAP2Q9H0W7 228 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 DEFB129Q9H1M3 183 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 DPH5Q9H2P9 285 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 UNC45AQ9H3U1 944 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 PPANQ9NQ55 473 aaKnown RBP14.15□□□□□ -0.14
USB1-207ENST00000563149 ZDHHC18Q9NUE0 388 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 BCCIPQ9P287 314 aaKnown RBP eCLIP14.15□□□□□ -0.14
USB1-207ENST00000563149 TMX2Q9Y320 296 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 PCDHAC2Q9Y5I4 1007 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 IGSF9BQ9UPX0 1349 aa14.15□□□□□ -0.14
USB1-207ENST00000563149 VGLL3A8MV65 326 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 FOXN3O00409 490 aaPredicted RBP14.14□□□□□ -0.15
USB1-207ENST00000563149 CHMP2AO43633 222 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 ECE2O60344 883 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 PHF2O75151 1096 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 RTN2O75298 545 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 MTA2O94776 668 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 VCAM1P19320 739 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 HNRNPH1P31943 449 aaKnown RBP14.14□□□□□ -0.15
USB1-207ENST00000563149 MCCD1P59942 119 aaPredicted RBP14.14□□□□□ -0.15
USB1-207ENST00000563149 GPC5P78333 572 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 IFFO1Q0D2I5 559 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 BYSLQ13895 437 aaKnown RBP14.14□□□□□ -0.15
USB1-207ENST00000563149 ARHGAP44Q17R89 818 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 CC2D2BQ6DHV5 1058 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 PHLDB3Q6NSJ2 640 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 FAM129AQ9BZQ8 928 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 LARSQ9P2J5 1176 aaKnown RBP14.14□□□□□ -0.15
USB1-207ENST00000563149 CNOT7Q9UIV1 285 aaKnown RBP14.14□□□□□ -0.15
USB1-207ENST00000563149 ALG6Q9Y672 507 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 SLX4Q8IY92 1834 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 H0YHG0 523 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 TRIM49P0CI25 452 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 TRIM49CP0CI26 452 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 GTF2A1P52655 376 aaPredicted RBP14.14□□□□□ -0.15
USB1-207ENST00000563149 MAGOHP61326 146 aaKnown RBP14.14□□□□□ -0.15
USB1-207ENST00000563149 JAG1P78504 1218 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 ACTN3Q08043 901 aaPredicted RBP14.14□□□□□ -0.15
USB1-207ENST00000563149 MAPK7Q13164 816 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 PRPF4BQ13523 1007 aaKnown RBP14.14□□□□□ -0.15
USB1-207ENST00000563149 FAM160B2Q86V87 743 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 TAX1BP1Q86VP1 789 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 PROCA1Q8NCQ7 364 aaPredicted RBP14.14□□□□□ -0.15
USB1-207ENST00000563149 MAGOHBQ96A72 148 aaKnown RBP14.14□□□□□ -0.15
USB1-207ENST00000563149 PGM2Q96G03 612 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 ACCSQ96QU6 501 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 TRIM51Q9BSJ1 452 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 WNT8AQ9H1J5 351 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 PABPC3Q9H361 631 aaKnown RBP14.14□□□□□ -0.15
USB1-207ENST00000563149 VCPKMTQ9H867 229 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 PCYOX1Q9UHG3 505 aa14.14□□□□□ -0.15
USB1-207ENST00000563149 COL11A2P13942 1736 aaPredicted RBP14.13□□□□□ -0.15
USB1-207ENST00000563149 CCDC169A6NNP5 214 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 ZBTB39O15060 712 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 HIP1RO75146 1068 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 GZMAP12544 262 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 CTNNA2P26232 953 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 VAMP7P51809 220 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 PMS2P54278 862 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 EPC2Q52LR7 807 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 CCDC121Q6ZUS5 278 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 JAMLQ86YT9 394 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 KSR1Q8IVT5 923 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 RAPGEF5Q92565 580 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 CABS1Q96KC9 395 aa14.13□□□□□ -0.15
USB1-207ENST00000563149 MXRA8Q9BRK3 442 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms