RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 TMX1Q9H3N1 280 aa18.43■□□□□ 0.54
CDT1-202ENST00000562747 ZSCAN16Q9H4T2 348 aaPredicted RBP18.43■□□□□ 0.54
CDT1-202ENST00000562747 ATP6V0A4Q9HBG4 840 aa18.43■□□□□ 0.54
CDT1-202ENST00000562747 FAM50BQ9Y247 325 aa18.43■□□□□ 0.54
CDT1-202ENST00000562747 RWDD3Q9Y3V2 267 aa18.43■□□□□ 0.54
CDT1-202ENST00000562747 MRPL42Q9Y6G3 142 aaKnown RBP18.43■□□□□ 0.54
CDT1-202ENST00000562747 ZNF318Q5VUA4 2279 aa18.42■□□□□ 0.54
CDT1-202ENST00000562747 ASAP2O43150 1006 aa18.42■□□□□ 0.54
CDT1-202ENST00000562747 CSPP1Q1MSJ5 1256 aa18.42■□□□□ 0.54
CDT1-202ENST00000562747 KRT79Q5XKE5 535 aa18.42■□□□□ 0.54
CDT1-202ENST00000562747 SNX29Q8TEQ0 813 aa18.42■□□□□ 0.54
CDT1-202ENST00000562747 TMEM143Q96AN5 459 aa18.42■□□□□ 0.54
CDT1-202ENST00000562747 ZNF668Q96K58 619 aaPredicted RBP18.42■□□□□ 0.54
CDT1-202ENST00000562747 INO80BQ9C086 356 aaPredicted RBP18.42■□□□□ 0.54
CDT1-202ENST00000562747 IGFLR1Q9H665 355 aa18.42■□□□□ 0.54
CDT1-202ENST00000562747 COL4A3BPQ9Y5P4 624 aa18.42■□□□□ 0.54
CDT1-202ENST00000562747 A0A087WZ62 844 aa18.41■□□□□ 0.54
CDT1-202ENST00000562747 SF3A1Q15459 793 aaKnown RBP18.41■□□□□ 0.54
CDT1-202ENST00000562747 HFE2Q6ZVN8 426 aa18.41■□□□□ 0.54
CDT1-202ENST00000562747 ADGRD2Q7Z7M1 963 aa18.41■□□□□ 0.54
CDT1-202ENST00000562747 PRPF31Q8WWY3 499 aaKnown RBP18.41■□□□□ 0.54
CDT1-202ENST00000562747 FDXACB1Q9BRP7 624 aaPredicted RBP18.41■□□□□ 0.54
CDT1-202ENST00000562747 XPNPEP1Q9NQW7 623 aa18.41■□□□□ 0.54
CDT1-202ENST00000562747 C1orf112Q9NSG2 853 aa18.41■□□□□ 0.54
CDT1-202ENST00000562747 BMP2KQ9NSY1 1161 aaPredicted RBP18.41■□□□□ 0.54
CDT1-202ENST00000562747 MUTYHQ9UIF7 546 aa18.41■□□□□ 0.54
CDT1-202ENST00000562747 A0A087WWV3 80 aa18.4■□□□□ 0.54
CDT1-202ENST00000562747 DENND3A2RUS2 1198 aa18.4■□□□□ 0.54
CDT1-202ENST00000562747 VWA3AA6NCI4 1184 aa18.4■□□□□ 0.54
CDT1-202ENST00000562747 NCK2O43639 380 aa18.4■□□□□ 0.54
CDT1-202ENST00000562747 ITGB1P05556 798 aa18.4■□□□□ 0.54
CDT1-202ENST00000562747 GATMP50440 423 aa18.4■□□□□ 0.54
CDT1-202ENST00000562747 LAMTOR4Q0VGL1 99 aa18.4■□□□□ 0.54
CDT1-202ENST00000562747 SMAD4Q13485 552 aaKnown RBP18.4■□□□□ 0.54
CDT1-202ENST00000562747 MXD4Q14582 209 aaPredicted RBP18.4■□□□□ 0.54
CDT1-202ENST00000562747 ECM1Q16610 540 aa18.4■□□□□ 0.54
CDT1-202ENST00000562747 KSR1Q8IVT5 923 aa18.4■□□□□ 0.54
CDT1-202ENST00000562747 KCTD17Q8N5Z5 321 aa18.4■□□□□ 0.54
CDT1-202ENST00000562747 AK8Q96MA6 479 aa18.4■□□□□ 0.54
CDT1-202ENST00000562747 FBXL18Q96ME1 805 aa18.4■□□□□ 0.54
CDT1-202ENST00000562747 NLRP4Q96MN2 994 aa18.4■□□□□ 0.54
CDT1-202ENST00000562747 RGS18Q9NS28 235 aa18.4■□□□□ 0.54
CDT1-202ENST00000562747 RNF216Q9NWF9 866 aaPredicted RBP18.4■□□□□ 0.54
CDT1-202ENST00000562747 PLAGL2Q9UPG8 496 aa18.4■□□□□ 0.54
CDT1-202ENST00000562747 KIAA1024Q9UPX6 916 aa18.4■□□□□ 0.54
CDT1-202ENST00000562747 WDFY4Q6ZS81 3184 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 ARHGEF35A5YM69 484 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 PP2D1A8MPX8 630 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 MGEA5O60502 916 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 USO1O60763 962 aaKnown RBP18.39■□□□□ 0.53
CDT1-202ENST00000562747 STAG3L1P0CL83 205 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 SFPQP23246 707 aaKnown RBP eCLIP18.39■□□□□ 0.53
CDT1-202ENST00000562747 SARSP49591 514 aaKnown RBP18.39■□□□□ 0.53
CDT1-202ENST00000562747 NHLH1Q02575 133 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 ADAM15Q13444 863 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 DSC3Q14574 896 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 PAN2Q504Q3 1202 aaKnown RBP18.39■□□□□ 0.53
CDT1-202ENST00000562747 SRGAP1Q7Z6B7 1085 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 NPAS4Q8IUM7 802 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 MCPH1Q8NEM0 835 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 MSLNLQ96KJ4 702 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 ADAM2Q99965 735 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 MMTAG2Q9BU76 263 aaKnown RBP18.39■□□□□ 0.53
CDT1-202ENST00000562747 PLVAPQ9BX97 442 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 IFT122Q9HBG6 1241 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 DDX19AQ9NUU7 478 aaKnown RBP18.39■□□□□ 0.53
CDT1-202ENST00000562747 PCDHGC5Q9Y5F6 944 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 TRIOO75962 3097 aa18.39■□□□□ 0.53
CDT1-202ENST00000562747 SLC26A4O43511 780 aa18.38■□□□□ 0.53
CDT1-202ENST00000562747 ZSCAN20P17040 1043 aaPredicted RBP18.38■□□□□ 0.53
CDT1-202ENST00000562747 CDC25AP30304 524 aa18.38■□□□□ 0.53
CDT1-202ENST00000562747 ARL2P36404 184 aa18.38■□□□□ 0.53
CDT1-202ENST00000562747 POU5F1BQ06416 359 aa18.38■□□□□ 0.53
CDT1-202ENST00000562747 HYIQ5T013 277 aa18.38■□□□□ 0.53
CDT1-202ENST00000562747 PADI6Q6TGC4 694 aa18.38■□□□□ 0.53
CDT1-202ENST00000562747 SLC24A5Q71RS6 500 aa18.38■□□□□ 0.53
CDT1-202ENST00000562747 CMTR2Q8IYT2 770 aaKnown RBP18.38■□□□□ 0.53
CDT1-202ENST00000562747 RNF149Q8NC42 400 aa18.38■□□□□ 0.53
CDT1-202ENST00000562747 P2RX5Q93086 422 aa18.38■□□□□ 0.53
CDT1-202ENST00000562747 NT5C3AQ9H0P0 336 aa18.38■□□□□ 0.53
CDT1-202ENST00000562747 CD207Q9UJ71 328 aa18.38■□□□□ 0.53
CDT1-202ENST00000562747 DNM3Q9UQ16 869 aa18.38■□□□□ 0.53
CDT1-202ENST00000562747 CLIC4Q9Y696 253 aa18.38■□□□□ 0.53
CDT1-202ENST00000562747 TECTAO75443 2155 aa18.38■□□□□ 0.53
CDT1-202ENST00000562747 FNDC1Q4ZHG4 1894 aaPredicted RBP18.37■□□□□ 0.53
CDT1-202ENST00000562747 C9IYK1 514 aa18.37■□□□□ 0.53
CDT1-202ENST00000562747 SRGAP2CP0DJJ0 459 aa18.37■□□□□ 0.53
CDT1-202ENST00000562747 CYP11B2P19099 503 aa18.37■□□□□ 0.53
CDT1-202ENST00000562747 LONP1P36776 959 aaKnown RBP18.37■□□□□ 0.53
CDT1-202ENST00000562747 MRE11P49959 708 aa18.37■□□□□ 0.53
CDT1-202ENST00000562747 TFDP1Q14186 410 aa18.37■□□□□ 0.53
CDT1-202ENST00000562747 PTPAQ15257 358 aa18.37■□□□□ 0.53
CDT1-202ENST00000562747 HERC4Q5GLZ8 1057 aaPredicted RBP18.37■□□□□ 0.53
CDT1-202ENST00000562747 FAM173BQ6P4H8 233 aa18.37■□□□□ 0.53
CDT1-202ENST00000562747 RNF135Q8IUD6 432 aa18.37■□□□□ 0.53
CDT1-202ENST00000562747 KLHL23Q8NBE8 558 aa18.37■□□□□ 0.53
CDT1-202ENST00000562747 SPPL3Q8TCT6 385 aa18.37■□□□□ 0.53
CDT1-202ENST00000562747 BHMT2Q9H2M3 363 aa18.37■□□□□ 0.53
CDT1-202ENST00000562747 CHST12Q9NRB3 414 aa18.37■□□□□ 0.53
CDT1-202ENST00000562747 CLEC1BQ9P126 229 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms