RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 TNIP1Q15025 636 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 TCEAL1Q15170 157 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 USP17L6PQ6QN14 398 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 PEX26Q7Z412 305 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 YTHDF3Q7Z739 585 aaKnown RBP8.14□□□□□ -1.11
CFDP1-202ENST00000562602 DEFB132Q7Z7B7 95 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 SFR1Q86XK3 245 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 SUPT20HQ8NEM7 779 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 CDK15Q96Q40 435 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 IWS1Q96ST2 819 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 EIF2AK1Q9BQI3 630 aaKnown RBP8.14□□□□□ -1.11
CFDP1-202ENST00000562602 REEP2Q9BRK0 252 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 PAGR1Q9BTK6 254 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 RAB17Q9H0T7 212 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 PARVGQ9HBI0 331 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 ARHGEF10LQ9HCE6 1279 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 GOPCQ9HD26 462 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 TMOD2Q9NZR1 351 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 AMFRQ9UKV5 643 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 UTP11Q9Y3A2 253 aaKnown RBP8.14□□□□□ -1.11
CFDP1-202ENST00000562602 MRPL11Q9Y3B7 192 aaKnown RBP8.14□□□□□ -1.11
CFDP1-202ENST00000562602 TAF1LQ8IZX4 1826 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 ATRNL1Q5VV63 1379 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 NCANO14594 1321 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 MIF4GDA9UHW6 222 aaKnown RBP8.13□□□□□ -1.11
CFDP1-202ENST00000562602 F8W031 263 aaPredicted RBP8.13□□□□□ -1.11
CFDP1-202ENST00000562602 GCOM1H8Y6P7 765 aaPredicted RBP8.13□□□□□ -1.11
CFDP1-202ENST00000562602 KCNK3O14649 394 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 PMM2O15305 246 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 MSH4O15457 936 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 SART1O43290 800 aaKnown RBP8.13□□□□□ -1.11
CFDP1-202ENST00000562602 NCK2O43639 380 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 CEP104O60308 925 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 KIAA0754O94854 1291 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 GCNT3O95395 438 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 GGPS1O95749 300 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 CPP00450 1065 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 MYZAPP0CAP1 466 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 POLR2MP0CAP2 368 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 KRT13P13646 458 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 TIMP2P16035 220 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 CXCR5P32302 372 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 SOX5P35711 763 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 HADHBP55084 474 aaKnown RBP8.13□□□□□ -1.11
CFDP1-202ENST00000562602 GNGT1P63211 74 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 DDR1Q08345 913 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 PABPC4Q13310 644 aaKnown RBP eCLIP8.13□□□□□ -1.11
CFDP1-202ENST00000562602 DRP2Q13474 957 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 AGBL2Q5U5Z8 902 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 STYK1Q6J9G0 422 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 NIPA1Q7RTP0 329 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 PTF1AQ7RTS3 328 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 ZNF571Q7Z3V5 609 aaPredicted RBP8.13□□□□□ -1.11
CFDP1-202ENST00000562602 KRT27Q7Z3Y8 459 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 FAM160B2Q86V87 743 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 AMIGO3Q86WK7 504 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 RHOT2Q8IXI1 618 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 FAM186BQ8IYM0 893 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 CERS5Q8N5B7 392 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 ANKRD13CQ8N6S4 541 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 LRRC57Q8N9N7 239 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 TPCN2Q8NHX9 752 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 IFT81Q8WYA0 676 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 CTNNBL1Q8WYA6 563 aaPredicted RBP8.13□□□□□ -1.11
CFDP1-202ENST00000562602 SLC35C1Q96A29 364 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 ATP6V1G3Q96LB4 118 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 CCDC43Q96MW1 224 aaKnown RBP8.13□□□□□ -1.11
CFDP1-202ENST00000562602 KRT12Q99456 494 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 RIT2Q99578 217 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 HSD17B14Q9BPX1 270 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 TMEM206Q9H813 350 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 LRRC4BQ9NT99 713 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.13□□□□□ -1.11
CFDP1-202ENST00000562602 TBC1D7Q9P0N9 293 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 GCNT4Q9P109 453 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 PARP2Q9UGN5 583 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 RASAL2Q9UJF2 1139 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 SALL4Q9UJQ4 1053 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 VAV3Q9UKW4 847 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 NENFQ9UMX5 172 aa8.13□□□□□ -1.11
CFDP1-202ENST00000562602 GREB1LQ9C091 1923 aaPredicted RBP8.12□□□□□ -1.11
CFDP1-202ENST00000562602 KRIT1O00522 736 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 AKAP3O75969 853 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 FTCDO95954 541 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 NDUFB10O96000 172 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 GLI1P08151 1106 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 GUCY2CP25092 1073 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 ABCD1P33897 745 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 GRM5P41594 1212 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 PRELPP51888 382 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 STAT2P52630 851 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 ZNF131P52739 623 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 DRG2P55039 364 aaKnown RBP8.12□□□□□ -1.11
CFDP1-202ENST00000562602 SLC7A5Q01650 507 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 ARID5AQ03989 594 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 ENPEPQ07075 957 aa8.12□□□□□ -1.11
CFDP1-202ENST00000562602 DHX34Q14147 1143 aaKnown RBP8.12□□□□□ -1.11
CFDP1-202ENST00000562602 TTC31Q49AM3 519 aaPredicted RBP8.12□□□□□ -1.11
CFDP1-202ENST00000562602 DCAF17Q5H9S7 520 aaPredicted RBP8.12□□□□□ -1.11
CFDP1-202ENST00000562602 TCERG1LQ5VWI1 586 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms