RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 AQP7O14520 342 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 EFCAB14O75071 495 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 TAF5LO75529 589 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 EFEMP2O95967 443 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 C6orf222P0C671 652 aaPredicted RBP6.96□□□□□ -1.3
UBR1-203ENST00000562173 GPR85P60893 370 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 CYP4F8P98187 520 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 SP3Q02447 781 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 MVKQ03426 396 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 SQSTM1Q13501 440 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 NTRK3Q16288 839 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 FAM209AQ5JX71 171 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 FOXB2Q5VYV0 432 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 OLFML2BQ68BL8 750 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 CPNE8Q86YQ8 564 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 RIOX2Q8IUF8 465 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 LZTR1Q8N653 840 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 NETO2Q8NC67 525 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 DPF3Q92784 378 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 PHF20Q9BVI0 1012 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 DEFB129Q9H1M3 183 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 VEZTQ9HBM0 779 aa6.96□□□□□ -1.3
UBR1-203ENST00000562173 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.96□□□□□ -1.3
UBR1-203ENST00000562173 TIMM13Q9Y5L4 95 aaPredicted RBP6.96□□□□□ -1.3
UBR1-203ENST00000562173 H7BY64 318 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 ABLIM1O14639 778 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 HTATSF1O43719 755 aaKnown RBP6.95□□□□□ -1.3
UBR1-203ENST00000562173 SYN1P17600 705 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 RIPK4P57078 832 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 FKBP1BP68106 108 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 SREBF2Q12772 1141 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 INF2Q27J81 1249 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 KIZQ2M2Z5 673 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 SLC9C1Q4G0N8 1177 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 UBE2Q1Q7Z7E8 422 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 RCBTB1Q8NDN9 531 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 APPBP2Q92624 585 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 OPTNQ96CV9 577 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 EYA3Q99504 573 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 MTA3Q9BTC8 594 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 NCOA5Q9HCD5 579 aaKnown RBP6.95□□□□□ -1.3
UBR1-203ENST00000562173 SFMBT1Q9UHJ3 866 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 CPA4Q9UI42 421 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 TMEFF2Q9UIK5 374 aaPredicted RBP6.95□□□□□ -1.3
UBR1-203ENST00000562173 ZMYND8Q9ULU4 1186 aaPredicted RBP6.95□□□□□ -1.3
UBR1-203ENST00000562173 GABRQQ9UN88 632 aa6.95□□□□□ -1.3
UBR1-203ENST00000562173 MRPL42Q9Y6G3 142 aaKnown RBP6.95□□□□□ -1.3
UBR1-203ENST00000562173 FRMPD3Q5JV73 1810 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 CCL15-CCL14A0A0B4J2E2 113 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 A0A1W2PQJ5 194 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 OR14I1A6ND48 311 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.94□□□□□ -1.3
UBR1-203ENST00000562173 PLD2O14939 933 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 PEX10O60683 326 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 CYBBP04839 570 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 APPP05067 770 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 IGKV5-2P06315 115 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 CCT4P50991 539 aaKnown RBP6.94□□□□□ -1.3
UBR1-203ENST00000562173 NR1I3Q14994 352 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 CCL15Q16663 113 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 CFAP100Q494V2 611 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 MROH9Q5TGP6 573 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 G2E3Q7L622 706 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 ARMC9Q7Z3E5 817 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 IFNL3Q8IZI9 196 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 GSTCDQ8NEC7 633 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 PLBD2Q8NHP8 589 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 CFAP53Q96M91 514 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 TMEM39BQ9GZU3 492 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 X6R8D5 127 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 XDHP47989 1333 aa6.94□□□□□ -1.3
UBR1-203ENST00000562173 LAMA2P24043 3122 aaKnown RBP6.94□□□□□ -1.3
UBR1-203ENST00000562173 MYH13Q9UKX3 1938 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 ZNF503-AS2A6NEH8 195 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 MANSC4A6NHS7 340 aaPredicted RBP6.93□□□□□ -1.3
UBR1-203ENST00000562173 TCP10L2B9ZVM9 353 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 BTBD19C9JJ37 291 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 CDC45O75419 566 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 MPOP05164 745 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 MSL3P1P0C860 447 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 GLI4P10075 376 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 SLC6A11P48066 632 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 LSAMPQ13449 338 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 VGLL4Q14135 290 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 TCEA2Q15560 299 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 FNDC3BQ53EP0 1204 aaKnown RBP6.93□□□□□ -1.3
UBR1-203ENST00000562173 WWC2Q6AWC2 1192 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 MPZL3Q6UWV2 235 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 LBX2Q6XYB7 198 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 C16orf86Q6ZW13 317 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 DCP2Q8IU60 420 aaKnown RBP6.93□□□□□ -1.3
UBR1-203ENST00000562173 ERO1AQ96HE7 468 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 TEPSINQ96N21 525 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 ALG1Q9BT22 464 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 TDRD3Q9H7E2 651 aaKnown RBP6.93□□□□□ -1.3
UBR1-203ENST00000562173 GULP1Q9UBP9 304 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 MED23Q9ULK4 1368 aa6.93□□□□□ -1.3
UBR1-203ENST00000562173 TCF20Q9UGU0 1960 aaKnown RBP6.92□□□□□ -1.3
UBR1-203ENST00000562173 TLDC2A0PJX2 215 aa6.92□□□□□ -1.3
UBR1-203ENST00000562173 ARNTLO00327 626 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms