RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 GAREM2Q75VX8 874 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 CXorf67Q86X51 503 aaPredicted RBP3.38□□□□□ -1.87
CHD9-204ENST00000561869 D2HGDHQ8N465 521 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 IL17DQ8TAD2 202 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 SLC5A5Q92911 643 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 MPHOSPH9Q99550 1183 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 MRIQ9BWK5 157 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 ENKD1Q9H0I2 346 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 VPS11Q9H270 941 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 TLR9Q9NR96 1032 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 PPP2R3BQ9Y5P8 575 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 A0A1W2PRX2 142 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 KRTAP23-1A1A580 65 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 NEMP1O14524 444 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 MAFGO15525 162 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 MTSS1O43312 755 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 LY86O95711 162 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 JUNP05412 331 aaKnown RBP3.37□□□□□ -1.87
CHD9-204ENST00000561869 HIBADHP31937 336 aaKnown RBP3.37□□□□□ -1.87
CHD9-204ENST00000561869 MANFP55145 182 aaKnown RBP3.37□□□□□ -1.87
CHD9-204ENST00000561869 DGCR2P98153 550 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 TRIM25Q14258 630 aaKnown RBP3.37□□□□□ -1.87
CHD9-204ENST00000561869 SART3Q15020 963 aaKnown RBP3.37□□□□□ -1.87
CHD9-204ENST00000561869 PDCD1Q15116 288 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 IGFL4Q6B9Z1 124 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 FAM111BQ6SJ93 734 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 FRMD7Q6ZUT3 714 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 RASSF3Q86WH2 238 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 UNC5BQ8IZJ1 945 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 HIST1H2AHQ96KK5 128 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 HIST1H2AJQ99878 128 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 ZNF703Q9H7S9 590 aaPredicted RBP3.37□□□□□ -1.87
CHD9-204ENST00000561869 C14orf93Q9H972 538 aaKnown RBP3.37□□□□□ -1.87
CHD9-204ENST00000561869 IL23AQ9NPF7 189 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 ING3Q9NXR8 418 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 CEP72Q9P209 647 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 SYNPO2Q9UMS6 1093 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 PCDHB6Q9Y5E3 794 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 NUMBLQ9Y6R0 609 aa3.37□□□□□ -1.87
CHD9-204ENST00000561869 A0A1W2PR48 441 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 DAPK3O43293 454 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 STC2O76061 302 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 FSBPO95073 299 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 CFBP00751 764 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 C1SP09871 688 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 CLEC2LP0C7M8 214 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 GDF5P43026 501 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 MASP1P48740 699 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 SCNN1GP51170 649 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 KLF10Q13118 480 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 DDB1Q16531 1140 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 MAN2A1Q16706 1144 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 NRN1LQ496H8 165 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 ATP13A4Q4VNC1 1196 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 PITRM1Q5JRX3 1037 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 C1QL3Q5VWW1 255 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 C11orf74Q86VG3 221 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 SGMS1Q86VZ5 419 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 C1orf210Q8IVY1 113 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 CMTM4Q8IZR5 234 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 UBR7Q8N806 425 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 CDYL2Q8N8U2 506 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 CLRN3Q8NCR9 226 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 CACTINQ8WUQ7 758 aaKnown RBP3.36□□□□□ -1.87
CHD9-204ENST00000561869 GAB3Q8WWW8 586 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 TCF25Q9BQ70 676 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 MENTQ9BUN1 341 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 ANO3Q9BYT9 981 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 WNT8AQ9H1J5 351 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 TOPORSQ9NS56 1045 aaPredicted RBP3.36□□□□□ -1.87
CHD9-204ENST00000561869 EVLQ9UI08 416 aaPredicted RBP3.36□□□□□ -1.87
CHD9-204ENST00000561869 PRSS50Q9UI38 385 aa3.36□□□□□ -1.87
CHD9-204ENST00000561869 ING1Q9UK53 422 aaPredicted RBP3.36□□□□□ -1.87
CHD9-204ENST00000561869 TMA7Q9Y2S6 64 aaKnown RBP3.36□□□□□ -1.87
CHD9-204ENST00000561869 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.35□□□□□ -1.87
CHD9-204ENST00000561869 GOLGA8BA8MQT2 603 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 CAPN14A8MX76 684 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 CYR61O00622 381 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 ZEB2O60315 1214 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 KDM1AO60341 852 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 EYA4O95677 639 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 POU3F3P20264 500 aaPredicted RBP3.35□□□□□ -1.87
CHD9-204ENST00000561869 GPR15P49685 360 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 RABGGTBP53611 331 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 SPIDRQ14159 915 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 RRP1BQ14684 758 aaKnown RBP3.35□□□□□ -1.87
CHD9-204ENST00000561869 CCDC178Q5BJE1 867 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 FNDC7Q5VTL7 733 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 Q6ZRM9 215 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 HTR3DQ70Z44 454 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 DDX46Q7L014 1031 aaKnown RBP3.35□□□□□ -1.87
CHD9-204ENST00000561869 TAS1R1Q7RTX1 841 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 TMPRSS6Q8IU80 811 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 AFAP1L2Q8N4X5 818 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 MSL3Q8N5Y2 521 aaKnown RBP3.35□□□□□ -1.87
CHD9-204ENST00000561869 USP7Q93009 1102 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 FERMT2Q96AC1 680 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 MIEF2Q96C03 454 aa3.35□□□□□ -1.87
CHD9-204ENST00000561869 ZNF512Q96ME7 567 aaPredicted RBP3.35□□□□□ -1.87
CHD9-204ENST00000561869 UIMC1Q96RL1 719 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms