RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 EOMESO95936 686 aa17.8■□□□□ 0.44
LMX1B-204ENST00000561065 SRGAP2CP0DJJ0 459 aa17.8■□□□□ 0.44
LMX1B-204ENST00000561065 TMEM173Q86WV6 379 aaPredicted RBP17.8■□□□□ 0.44
LMX1B-204ENST00000561065 EXOC8Q8IYI6 725 aa17.8■□□□□ 0.44
LMX1B-204ENST00000561065 ABI1Q8IZP0 508 aa17.8■□□□□ 0.44
LMX1B-204ENST00000561065 EFHBQ8N7U6 833 aa17.8■□□□□ 0.44
LMX1B-204ENST00000561065 FBXO18Q8NFZ0 1043 aa17.8■□□□□ 0.44
LMX1B-204ENST00000561065 ASAP3Q8TDY4 903 aa17.8■□□□□ 0.44
LMX1B-204ENST00000561065 MTRQ99707 1265 aa17.8■□□□□ 0.44
LMX1B-204ENST00000561065 BARX2Q9UMQ3 279 aaPredicted RBP17.8■□□□□ 0.44
LMX1B-204ENST00000561065 PER2O15055 1255 aa17.79■□□□□ 0.44
LMX1B-204ENST00000561065 GAS2O43903 313 aaKnown RBP17.79■□□□□ 0.44
LMX1B-204ENST00000561065 SPATA31C1P0DKV0 1188 aa17.79■□□□□ 0.44
LMX1B-204ENST00000561065 HOXA11P31270 313 aaPredicted RBP17.79■□□□□ 0.44
LMX1B-204ENST00000561065 RARRES1P49788 294 aa17.79■□□□□ 0.44
LMX1B-204ENST00000561065 PLCB3Q01970 1234 aa17.79■□□□□ 0.44
LMX1B-204ENST00000561065 ZP2Q05996 745 aa17.79■□□□□ 0.44
LMX1B-204ENST00000561065 NBR1Q14596 966 aa17.79■□□□□ 0.44
LMX1B-204ENST00000561065 CSPP1Q1MSJ5 1256 aa17.79■□□□□ 0.44
LMX1B-204ENST00000561065 PUS10Q3MIT2 529 aaKnown RBP17.79■□□□□ 0.44
LMX1B-204ENST00000561065 UBXN11Q5T124 520 aa17.79■□□□□ 0.44
LMX1B-204ENST00000561065 PLPP4Q5VZY2 271 aa17.79■□□□□ 0.44
LMX1B-204ENST00000561065 OTUD6AQ7L8S5 288 aa17.79■□□□□ 0.44
LMX1B-204ENST00000561065 SLC39A11Q8N1S5 342 aa17.79■□□□□ 0.44
LMX1B-204ENST00000561065 RNF149Q8NC42 400 aa17.79■□□□□ 0.44
LMX1B-204ENST00000561065 PIGOQ8TEQ8 1089 aa17.79■□□□□ 0.44
LMX1B-204ENST00000561065 MRPS27Q92552 414 aaKnown RBP17.79■□□□□ 0.44
LMX1B-204ENST00000561065 ZNF558Q96NG5 402 aa17.79■□□□□ 0.44
LMX1B-204ENST00000561065 TBC1D32Q96NH3 1257 aa17.79■□□□□ 0.44
LMX1B-204ENST00000561065 INO80BQ9C086 356 aaPredicted RBP17.79■□□□□ 0.44
LMX1B-204ENST00000561065 MED24O75448 989 aa17.78■□□□□ 0.44
LMX1B-204ENST00000561065 CD2BP2O95400 341 aaKnown RBP17.78■□□□□ 0.44
LMX1B-204ENST00000561065 NDUFV1P49821 464 aa17.78■□□□□ 0.44
LMX1B-204ENST00000561065 SMAD4Q13485 552 aaKnown RBP17.78■□□□□ 0.44
LMX1B-204ENST00000561065 CAPSQ13938 189 aa17.78■□□□□ 0.44
LMX1B-204ENST00000561065 SMAD2Q15796 467 aaKnown RBP17.78■□□□□ 0.44
LMX1B-204ENST00000561065 DUSP6Q16828 381 aa17.78■□□□□ 0.44
LMX1B-204ENST00000561065 SRGAP1Q7Z6B7 1085 aa17.78■□□□□ 0.44
LMX1B-204ENST00000561065 GJD3Q8N144 294 aa17.78■□□□□ 0.44
LMX1B-204ENST00000561065 TCP11Q8WWU5 503 aa17.78■□□□□ 0.44
LMX1B-204ENST00000561065 FOXP1Q9H334 677 aaPredicted RBP17.78■□□□□ 0.44
LMX1B-204ENST00000561065 C11orf16Q9NQ32 467 aa17.78■□□□□ 0.44
LMX1B-204ENST00000561065 ANKEF1Q9NU02 776 aa17.78■□□□□ 0.44
LMX1B-204ENST00000561065 RAPGEFL1Q9UHV5 662 aa17.78■□□□□ 0.44
LMX1B-204ENST00000561065 LZTS1Q9Y250 596 aa17.78■□□□□ 0.44
LMX1B-204ENST00000561065 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.78■□□□□ 0.44
LMX1B-204ENST00000561065 HIDE1A8MVS5 230 aa17.77■□□□□ 0.44
LMX1B-204ENST00000561065 NT5C1B-RDH14C9J2C7 533 aa17.77■□□□□ 0.44
LMX1B-204ENST00000561065 ZNF623O75123 536 aa17.77■□□□□ 0.44
LMX1B-204ENST00000561065 OR52Z1P0C646 297 aa17.77■□□□□ 0.44
LMX1B-204ENST00000561065 AFF1P51825 1210 aaKnown RBP17.77■□□□□ 0.44
LMX1B-204ENST00000561065 BCAR1P56945 870 aa17.77■□□□□ 0.44
LMX1B-204ENST00000561065 ORC2Q13416 577 aaPredicted RBP17.77■□□□□ 0.44
LMX1B-204ENST00000561065 ZNF174Q15697 407 aa17.77■□□□□ 0.44
LMX1B-204ENST00000561065 AGMOQ6ZNB7 445 aa17.77■□□□□ 0.44
LMX1B-204ENST00000561065 SMRP1Q8NCR6 262 aa17.77■□□□□ 0.44
LMX1B-204ENST00000561065 BCL7CQ8WUZ0 217 aaPredicted RBP17.77■□□□□ 0.44
LMX1B-204ENST00000561065 PPP2R3CQ969Q6 453 aa17.77■□□□□ 0.44
LMX1B-204ENST00000561065 TCF25Q9BQ70 676 aa17.77■□□□□ 0.44
LMX1B-204ENST00000561065 MRPL9Q9BYD2 267 aaKnown RBP17.77■□□□□ 0.44
LMX1B-204ENST00000561065 TLE6Q9H808 572 aa17.77■□□□□ 0.44
LMX1B-204ENST00000561065 TBC1D13Q9NVG8 400 aa17.77■□□□□ 0.44
LMX1B-204ENST00000561065 CD207Q9UJ71 328 aa17.77■□□□□ 0.44
LMX1B-204ENST00000561065 NOL7Q9UMY1 257 aaKnown RBP17.77■□□□□ 0.44
LMX1B-204ENST00000561065 INPP5FQ9Y2H2 1132 aa17.77■□□□□ 0.44
LMX1B-204ENST00000561065 PCDHB2Q9Y5E7 798 aa17.77■□□□□ 0.44
LMX1B-204ENST00000561065 TDRD15B5MCY1 1934 aaKnown RBP17.77■□□□□ 0.44
LMX1B-204ENST00000561065 TRIOO75962 3097 aa17.77■□□□□ 0.43
LMX1B-204ENST00000561065 TSPAN1O60635 241 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 USO1O60763 962 aaKnown RBP17.76■□□□□ 0.43
LMX1B-204ENST00000561065 OFD1O75665 1012 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 DGAT1O75907 488 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 GLRA2P23416 452 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 PPM1AP35813 382 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 ARL2P36404 184 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 RAB27AP51159 221 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 PTENP60484 403 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 KCNC3Q14003 757 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 AMHR2Q16671 573 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 TTC38Q5R3I4 469 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 POTEGQ6S5H5 508 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 CATSPER3Q86XQ3 398 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 IFNLR1Q8IU57 520 aaPredicted RBP17.76■□□□□ 0.43
LMX1B-204ENST00000561065 NOSTRINQ8IVI9 506 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 MICAL1Q8TDZ2 1067 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 GPRC5CQ9NQ84 441 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 SPG21Q9NZD8 308 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 GTF3C3Q9Y5Q9 886 aa17.76■□□□□ 0.43
LMX1B-204ENST00000561065 C19orf67A6NJJ6 358 aa17.75■□□□□ 0.43
LMX1B-204ENST00000561065 ZC3H11AO75152 810 aaKnown RBP eCLIP17.75■□□□□ 0.43
LMX1B-204ENST00000561065 EYA4O95677 639 aa17.75■□□□□ 0.43
LMX1B-204ENST00000561065 SSTR3P32745 418 aaPredicted RBP17.75■□□□□ 0.43
LMX1B-204ENST00000561065 TECP42680 631 aa17.75■□□□□ 0.43
LMX1B-204ENST00000561065 TRAPPC10P48553 1259 aa17.75■□□□□ 0.43
LMX1B-204ENST00000561065 MBTD1Q05BQ5 628 aa17.75■□□□□ 0.43
LMX1B-204ENST00000561065 NOMO2Q5JPE7 1267 aa17.75■□□□□ 0.43
LMX1B-204ENST00000561065 MRPL10Q7Z7H8 261 aaKnown RBP17.75■□□□□ 0.43
LMX1B-204ENST00000561065 ADHFE1Q8IWW8 467 aa17.75■□□□□ 0.43
LMX1B-204ENST00000561065 C4orf32Q8N8J7 132 aa17.75■□□□□ 0.43
LMX1B-204ENST00000561065 SMG8Q8ND04 991 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms