RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 PDILTQ8N807 584 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 TMEM87AQ8NBN3 555 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 DNAJC19Q96DA6 116 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 ZNF668Q96K58 619 aaPredicted RBP10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 IFT74Q96LB3 600 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 PRIMPOLQ96LW4 560 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 PPP1R16BQ96T49 567 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 REEP2Q9BRK0 252 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 PANK2Q9BZ23 570 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 C2orf40Q9H1Z8 148 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 FZD8Q9H461 694 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 MINDY3Q9H8M7 445 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 GDPD2Q9HCC8 539 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 C1orf112Q9NSG2 853 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 LARSQ9P2J5 1176 aaKnown RBP10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 SLC4A7Q9Y6M7 1214 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 ANK1P16157 1881 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 A0A1B0GVL5 298 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 FRMD3A2A2Y4 597 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 MYMKA6NI61 221 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 C9IYK1 514 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 SLFN14P0C7P3 912 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 PLS3P13797 630 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 PFKFB1P16118 471 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 HOXA11P31270 313 aaPredicted RBP10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 NPTX2P47972 431 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 EFNA5P52803 228 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 SMAD3P84022 425 aaKnown RBP10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 AMPD3Q01432 767 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 MBTD1Q05BQ5 628 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 AMHR2Q16671 573 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 SLC24A5Q71RS6 500 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 LINC01599Q8WXQ3 324 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 DDX12PQ92771 950 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 TOP1MTQ969P6 601 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 SCLT1Q96NL6 688 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 C7orf25Q9BPX7 421 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 CCDC113Q9H0I3 377 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 TMEM134Q9H6X4 195 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 ELAC1Q9H777 363 aaKnown RBP10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 AGPAT5Q9NUQ2 364 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 RNF216Q9NWF9 866 aaPredicted RBP10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 ARHGAP28Q9P2N2 729 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 LAMA3Q16787 3333 aa10.64□□□□□ -0.71
RABGGTA-221ENST00000561055 ADGRA3Q8IWK6 1321 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 NPHP3-ACAD11A0A0J9YXS1 232 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 LRRIQ4A6NIV6 560 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 ACTN4O43707 911 aaKnown RBP10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 MGEA5O60502 916 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 ZNF623O75123 536 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 CSDE1O75534 798 aaKnown RBP10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 AMHP03971 560 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 MYL1P05976 194 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 MAPTP10636 758 aaKnown RBP10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 ABCD1P33897 745 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 SYKP43405 635 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 KCNJ6P48051 423 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 SARSP49591 514 aaKnown RBP10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 NDUFA8P51970 172 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 SMTNP53814 917 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 NCKAP1LP55160 1127 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 PEX3P56589 373 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 DEFB103AP81534 67 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 DHX8Q14562 1220 aaKnown RBP10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 CATSPER4Q7RTX7 472 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 ZBTB8OSQ8IWT0 167 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 SLC17A8Q8NDX2 589 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 ENGASEQ8NFI3 743 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 MRPS27Q92552 414 aaKnown RBP10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 DHX58Q96C10 678 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 FIZ1Q96SL8 496 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 ADAM2Q99965 735 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 ST6GALNAC4Q9H4F1 302 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 PARVGQ9HBI0 331 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 POLD4Q9HCU8 107 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 KMT5AQ9NQR1 393 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 PRMT7Q9NVM4 692 aaPredicted RBP10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 DACT1Q9NYF0 836 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 SEL1LQ9UBV2 794 aa10.63□□□□□ -0.71
RABGGTA-221ENST00000561055 A0A0U1RQF3 1178 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 A0A1B0GUA9 196 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 SFI1A8K8P3 1242 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 ZBBXA8MT70 800 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 H0YCG3 227 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 INO80B-WBP1J3KQ70 363 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 K7ERI5 159 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 ACKR2O00590 384 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 TRAK2O60296 914 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 TSPAN1O60635 241 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 GJB5O95377 273 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 ATP2A2P16615 1042 aaKnown RBP10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 ZSCAN20P17040 1043 aaPredicted RBP10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 GAP43P17677 238 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 FGFR4P22455 802 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 HTRA4P83105 476 aaPredicted RBP10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 RAD51AP2Q09MP3 1159 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 DMP1Q13316 513 aaPredicted RBP10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 MAPK6Q16659 721 aa10.62□□□□□ -0.71
RABGGTA-221ENST00000561055 LONRF3Q496Y0 759 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms