RNA–Protein interactions for RNA: ENST00000560993.1

SEMA4B-217, Transcript of semaphorin 4B, humanhuman

TSL 4

Gene SEMA4B, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-217ENST00000560993 GRIK4Q16099 956 aa16.89■□□□□ 0.29
SEMA4B-217ENST00000560993 NCAPH2Q6IBW4 605 aa16.89■□□□□ 0.29
SEMA4B-217ENST00000560993 CAVIN1Q6NZI2 390 aaKnown RBP16.89■□□□□ 0.29
SEMA4B-217ENST00000560993 B3GNT9Q6UX72 402 aa16.89■□□□□ 0.29
SEMA4B-217ENST00000560993 TSHZ1Q6ZSZ6 1077 aa16.89■□□□□ 0.29
SEMA4B-217ENST00000560993 CABP7Q86V35 215 aa16.89■□□□□ 0.29
SEMA4B-217ENST00000560993 CMTR2Q8IYT2 770 aaKnown RBP16.89■□□□□ 0.29
SEMA4B-217ENST00000560993 PCYT2Q99447 389 aa16.89■□□□□ 0.29
SEMA4B-217ENST00000560993 MMTAG2Q9BU76 263 aaKnown RBP16.89■□□□□ 0.29
SEMA4B-217ENST00000560993 TMX1Q9H3N1 280 aa16.89■□□□□ 0.29
SEMA4B-217ENST00000560993 ZNF215Q9UL58 517 aaPredicted RBP16.89■□□□□ 0.29
SEMA4B-217ENST00000560993 NFASCO94856 1347 aa16.89■□□□□ 0.29
SEMA4B-217ENST00000560993 DMXL1Q9Y485 3027 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 PER2O15055 1255 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 POLR2DO15514 142 aaKnown RBP16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 SLC26A4O43511 780 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 KINO60870 393 aaKnown RBP16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 MARK3P27448 753 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 AVPR2P30518 371 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 SIGLEC14Q08ET2 396 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 KCNC3Q14003 757 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 PAN2Q504Q3 1202 aaKnown RBP16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 NAALADL2Q58DX5 795 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 KRT79Q5XKE5 535 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 PDILTQ8N807 584 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 SNX29Q8TEQ0 813 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 SYAP1Q96A49 352 aaPredicted RBP16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 SDF4Q9BRK5 362 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 PYM1Q9BRP8 204 aaKnown RBP16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 PHF7Q9BWX1 381 aaPredicted RBP16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 UNC45AQ9H3U1 944 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 TMEM63CQ9P1W3 806 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 HCSTQ9UBK5 93 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 TUBE1Q9UJT0 475 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 STK24Q9Y6E0 443 aa16.88■□□□□ 0.29
SEMA4B-217ENST00000560993 FRYLO94915 3013 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 FNDC1Q4ZHG4 1894 aaPredicted RBP16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 DDX39AO00148 427 aaKnown RBP16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 EML1O00423 815 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 GFRA3O60609 400 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 MRPS6P82932 125 aaKnown RBP16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 KRT76Q01546 638 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 KARSQ15046 597 aaKnown RBP16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 CCDC183Q5T5S1 534 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 HAUS3Q68CZ6 603 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 ERMNQ8TAM6 284 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 RPGRIP1Q96KN7 1286 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 TIGD1Q96MW7 591 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 PANK2Q9BZ23 570 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 S1PR5Q9H228 398 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 CLSTN2Q9H4D0 955 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 DISC1Q9NRI5 854 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 CCDC39Q9UFE4 941 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 USP25Q9UHP3 1055 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 TCEAL9Q9UHQ7 104 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 PADI3Q9ULW8 664 aa16.87■□□□□ 0.29
SEMA4B-217ENST00000560993 CHMP2AO43633 222 aa16.86■□□□□ 0.29
SEMA4B-217ENST00000560993 CCT6AP40227 531 aaKnown RBP16.86■□□□□ 0.29
SEMA4B-217ENST00000560993 ERVFC1P60507 584 aa16.86■□□□□ 0.29
SEMA4B-217ENST00000560993 E2F4Q16254 413 aa16.86■□□□□ 0.29
SEMA4B-217ENST00000560993 HYIQ5T013 277 aa16.86■□□□□ 0.29
SEMA4B-217ENST00000560993 ZNF746Q6NUN9 644 aaPredicted RBP16.86■□□□□ 0.29
SEMA4B-217ENST00000560993 NPAS4Q8IUM7 802 aa16.86■□□□□ 0.29
SEMA4B-217ENST00000560993 SUGP1Q8IWZ8 645 aaKnown RBP16.86■□□□□ 0.29
SEMA4B-217ENST00000560993 GIMAP8Q8ND71 665 aaPredicted RBP16.86■□□□□ 0.29
SEMA4B-217ENST00000560993 RASSF8Q8NHQ8 419 aa16.86■□□□□ 0.29
SEMA4B-217ENST00000560993 DHX58Q96C10 678 aa16.86■□□□□ 0.29
SEMA4B-217ENST00000560993 CALML4Q96GE6 196 aa16.86■□□□□ 0.29
SEMA4B-217ENST00000560993 PRRX2Q99811 253 aa16.86■□□□□ 0.29
SEMA4B-217ENST00000560993 NUP62CLQ9H1M0 184 aa16.86■□□□□ 0.29
SEMA4B-217ENST00000560993 KDM3AQ9Y4C1 1321 aa16.86■□□□□ 0.29
SEMA4B-217ENST00000560993 ACTN4O43707 911 aaKnown RBP16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 MGEA5O60502 916 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 INSRRP14616 1297 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 ATF7P17544 494 aaPredicted RBP16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 PLCG1P19174 1290 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 STAT6P42226 847 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 JAK3P52333 1124 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 TMEM62Q0P6H9 643 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 EPHA7Q15375 998 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 LONRF3Q496Y0 759 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 TMEM119Q4V9L6 283 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 RRAGBQ5VZM2 374 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 KRBA2Q6ZNG9 492 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 MIER3Q7Z3K6 550 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 IQUBQ8NA54 791 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 RDM1Q8NG50 284 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 TRAPPC12Q8WVT3 735 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 SEPT1Q8WYJ6 367 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 CDK5RAP3Q96JB5 506 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 PNMA5Q96PV4 448 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 EIF2AK1Q9BQI3 630 aaKnown RBP16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 POLR3CQ9BUI4 534 aaPredicted RBP16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 FAM49AQ9H0Q0 323 aaPredicted RBP16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 TLE6Q9H808 572 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 JPH1Q9HDC5 661 aaPredicted RBP16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 SLC9A2Q9UBY0 812 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 SERTAD1Q9UHV2 236 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 CDH22Q9UJ99 828 aa16.85■□□□□ 0.29
SEMA4B-217ENST00000560993 SQORQ9Y6N5 450 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms