RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 ACTR2P61160 394 aa10.87□□□□□ -0.67
HERC1-210ENST00000560897 RING1Q06587 406 aa10.87□□□□□ -0.67
HERC1-210ENST00000560897 MTAPQ13126 283 aa10.87□□□□□ -0.67
HERC1-210ENST00000560897 ZNF852Q6ZMS4 543 aa10.87□□□□□ -0.67
HERC1-210ENST00000560897 CLDN23Q96B33 292 aa10.87□□□□□ -0.67
HERC1-210ENST00000560897 EVI5LQ96CN4 794 aa10.87□□□□□ -0.67
HERC1-210ENST00000560897 KIF12Q96FN5 646 aa10.87□□□□□ -0.67
HERC1-210ENST00000560897 IER2Q9BTL4 223 aa10.87□□□□□ -0.67
HERC1-210ENST00000560897 IGF2RP11717 2491 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 PALM3A6NDB9 673 aaPredicted RBP10.86□□□□□ -0.67
HERC1-210ENST00000560897 SRRM3A6NNA2 597 aaPredicted RBP10.86□□□□□ -0.67
HERC1-210ENST00000560897 GPR32O75388 356 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 SKIP12755 728 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 MX1P20591 662 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 TMOD1P28289 359 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 CCR3P51677 355 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 MFAP1P55081 439 aaKnown RBP10.86□□□□□ -0.67
HERC1-210ENST00000560897 ADCY1Q08828 1119 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 NOMO2Q5JPE7 1267 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 PARM1Q6UWI2 310 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 ZNF598Q86UK7 904 aaKnown RBP10.86□□□□□ -0.67
HERC1-210ENST00000560897 CKAP2LQ8IYA6 745 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 ZNF710Q8N1W2 664 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 URGCPQ8TCY9 931 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 HDAC7Q8WUI4 952 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 BCL7CQ8WUZ0 217 aaPredicted RBP10.86□□□□□ -0.67
HERC1-210ENST00000560897 PIBF1Q8WXW3 757 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 FGF14Q92915 247 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 FAM193BQ96PV7 902 aaPredicted RBP10.86□□□□□ -0.67
HERC1-210ENST00000560897 KRT23Q9C075 422 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 PLEKHA4Q9H4M7 779 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 RIOX1Q9H6W3 641 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 NRDE2Q9H7Z3 1164 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 JADE2Q9NQC1 790 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 TBC1D13Q9NVG8 400 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 ZDHHC7Q9NXF8 308 aa10.86□□□□□ -0.67
HERC1-210ENST00000560897 FLNBO75369 2602 aaKnown RBP10.86□□□□□ -0.67
HERC1-210ENST00000560897 COL4A3Q01955 1670 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 SPEGQ15772 3267 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 A0A0D9SFI3 127 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 SPDYE3A6NKU9 549 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 PIK3CDO00329 1044 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 KCNK5O95279 499 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 EIF4BP23588 611 aaKnown RBP10.85□□□□□ -0.67
HERC1-210ENST00000560897 KIF5BP33176 963 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 SLC11A1P49279 550 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 NLRP11P59045 1033 aaKnown RBP10.85□□□□□ -0.67
HERC1-210ENST00000560897 FOXC1Q12948 553 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 PSAPL1Q6NUJ1 521 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 PDXDC2PQ6P474 469 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 CEP68Q76N32 757 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 ZCCHC14Q8WYQ9 949 aaKnown RBP10.85□□□□□ -0.67
HERC1-210ENST00000560897 FAM227BQ96M60 508 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 RPS6KC1Q96S38 1066 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 RPP25Q9BUL9 199 aaKnown RBP10.85□□□□□ -0.67
HERC1-210ENST00000560897 PHF20Q9BVI0 1012 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 ADAM33Q9BZ11 813 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 NT5C3AQ9H0P0 336 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 ZSWIM5Q9P217 1185 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 SEC63Q9UGP8 760 aaKnown RBP10.85□□□□□ -0.67
HERC1-210ENST00000560897 CDH7Q9ULB5 785 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 CEP131Q9UPN4 1083 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 UBIAD1Q9Y5Z9 338 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 GREB1Q4ZG55 1949 aa10.85□□□□□ -0.67
HERC1-210ENST00000560897 MTCL1Q9Y4B5 1905 aaKnown RBP10.85□□□□□ -0.67
HERC1-210ENST00000560897 NFASCO94856 1347 aa10.84□□□□□ -0.67
HERC1-210ENST00000560897 EIF4E1BA6NMX2 242 aaKnown RBP10.84□□□□□ -0.67
HERC1-210ENST00000560897 TEX28O15482 410 aa10.84□□□□□ -0.67
HERC1-210ENST00000560897 ZIC2O95409 532 aaPredicted RBP10.84□□□□□ -0.67
HERC1-210ENST00000560897 C22orf31O95567 290 aa10.84□□□□□ -0.67
HERC1-210ENST00000560897 SOD2P04179 222 aa10.84□□□□□ -0.67
HERC1-210ENST00000560897 CNR2P34972 360 aa10.84□□□□□ -0.67
HERC1-210ENST00000560897 GRM4Q14833 912 aa10.84□□□□□ -0.67
HERC1-210ENST00000560897 LONRF3Q496Y0 759 aa10.84□□□□□ -0.67
HERC1-210ENST00000560897 TWF2Q6IBS0 349 aaKnown RBP10.84□□□□□ -0.67
HERC1-210ENST00000560897 ZNF589Q86UQ0 364 aaPredicted RBP10.84□□□□□ -0.67
HERC1-210ENST00000560897 ZNF707Q96C28 371 aaPredicted RBP10.84□□□□□ -0.67
HERC1-210ENST00000560897 HERC2P3Q9BVR0 1158 aa10.84□□□□□ -0.67
HERC1-210ENST00000560897 VN1R3Q9BXE9 311 aa10.84□□□□□ -0.67
HERC1-210ENST00000560897 PRKD2Q9BZL6 878 aa10.84□□□□□ -0.67
HERC1-210ENST00000560897 DCTPP1Q9H773 170 aa10.84□□□□□ -0.67
HERC1-210ENST00000560897 CNNM2Q9H8M5 875 aa10.84□□□□□ -0.67
HERC1-210ENST00000560897 ZNF302Q9NR11 478 aa10.84□□□□□ -0.67
HERC1-210ENST00000560897 DNAJB4Q9UDY4 337 aa10.84□□□□□ -0.67
HERC1-210ENST00000560897 ZBTB47Q9UFB7 747 aaPredicted RBP10.84□□□□□ -0.67
HERC1-210ENST00000560897 NDRG2Q9UN36 371 aaKnown RBP10.84□□□□□ -0.67
HERC1-210ENST00000560897 FAN1Q9Y2M0 1017 aa10.84□□□□□ -0.67
HERC1-210ENST00000560897 MYH9P35579 1960 aaKnown RBP10.83□□□□□ -0.68
HERC1-210ENST00000560897 TAF4O00268 1085 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 MEIS2O14770 477 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 MAGEB2O15479 319 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 GAS2O43903 313 aaKnown RBP10.83□□□□□ -0.68
HERC1-210ENST00000560897 LILRB3O75022 631 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 ALDH2P05091 517 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 SPATA31D3P0C874 917 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 PHKA2P46019 1235 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 GLUD2P49448 558 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 NOVA1P51513 510 aaKnown RBP10.83□□□□□ -0.68
HERC1-210ENST00000560897 CLCN3P51790 818 aa10.83□□□□□ -0.68
HERC1-210ENST00000560897 STPG1Q5TH74 334 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms