RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 CALM1P0DP23 149 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 CALM2P0DP24 149 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 CALM3P0DP25 149 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 RFX1P22670 979 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 KLRC2P26717 231 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 GBP2P32456 591 aaPredicted RBP11.21□□□□□ -0.61
TPM1-225ENST00000560679 LIFRP42702 1097 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 AFF1P51825 1210 aaKnown RBP11.21□□□□□ -0.61
TPM1-225ENST00000560679 PRKCEQ02156 737 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 AP3B2Q13367 1082 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 UGCGQ16739 394 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 NOMO2Q5JPE7 1267 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 TTC22Q5TAA0 569 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 ZNF280BQ86YH2 543 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 C1orf210Q8IVY1 113 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 TEX2Q8IWB9 1127 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 FANCBQ8NB91 859 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 PJA1Q8NG27 643 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 NLRP7Q8WX94 980 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 MAP4K1Q92918 833 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 LRRC2Q9BYS8 371 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 FOXQ1Q9C009 403 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 GBP3Q9H0R5 595 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 DACT1Q9NYF0 836 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 CEP131Q9UPN4 1083 aa11.21□□□□□ -0.61
TPM1-225ENST00000560679 RBM8AQ9Y5S9 174 aaKnown RBP11.21□□□□□ -0.61
TPM1-225ENST00000560679 MYH15Q9Y2K3 1946 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 RFPL2O75678 378 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 DDHD2O94830 711 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 PAPLNO95428 1278 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 PSAPP07602 524 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 CYP3A4P08684 503 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 TMOD1P28289 359 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 MCM5P33992 734 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 ZNF76P36508 570 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 GLB1LQ6UWU2 654 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 SMAP1Q8IYB5 467 aaPredicted RBP11.2□□□□□ -0.62
TPM1-225ENST00000560679 RSPH1Q8WYR4 309 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 LENG9Q96B70 501 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 ZNF707Q96C28 371 aaPredicted RBP11.2□□□□□ -0.62
TPM1-225ENST00000560679 TMEM87BQ96K49 555 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 FAM167AQ96KS9 214 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 SCLT1Q96NL6 688 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 ZNF577Q9BSK1 485 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 EMILIN2Q9BXX0 1053 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 RHOBTB2Q9BYZ6 727 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 RWDD1Q9H446 243 aaPredicted RBP11.2□□□□□ -0.62
TPM1-225ENST00000560679 SIT1Q9Y3P8 196 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 PCDHA10Q9Y5I2 948 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 SLC12A7Q9Y666 1083 aa11.2□□□□□ -0.62
TPM1-225ENST00000560679 CCDC195A0A1B0GUA6 201 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 CARNS1A5YM72 827 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 SMCO2A6NFE2 343 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 ANHXE9PGG2 379 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 INPPL1O15357 1258 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 MYBP10242 640 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 HTR4Q13639 388 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 TARBP2Q15633 366 aaKnown RBP11.19□□□□□ -0.62
TPM1-225ENST00000560679 JAKMIP3Q5VZ66 844 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 TWF2Q6IBS0 349 aaKnown RBP11.19□□□□□ -0.62
TPM1-225ENST00000560679 SGMS1Q86VZ5 419 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 ZNF710Q8N1W2 664 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 TMTC2Q8N394 836 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 ST13P5Q8NFI4 369 aaPredicted RBP11.19□□□□□ -0.62
TPM1-225ENST00000560679 RUFY2Q8WXA3 655 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 CEP89Q96ST8 783 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 SLC2A4RGQ9NR83 387 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 CHST12Q9NRB3 414 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 TBC1D22BQ9NU19 505 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 FAM105AQ9NUU6 356 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 MARCH5Q9NX47 278 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 BARHL2Q9NY43 387 aa11.19□□□□□ -0.62
TPM1-225ENST00000560679 PIN4Q9Y237 131 aaKnown RBP11.19□□□□□ -0.62
TPM1-225ENST00000560679 A0A087WZ62 844 aa11.18□□□□□ -0.62
TPM1-225ENST00000560679 TMEM150BA6NC51 233 aa11.18□□□□□ -0.62
TPM1-225ENST00000560679 WDR64B1ANS9 1081 aa11.18□□□□□ -0.62
TPM1-225ENST00000560679 C2CD2LO14523 706 aa11.18□□□□□ -0.62
TPM1-225ENST00000560679 TEX28O15482 410 aa11.18□□□□□ -0.62
TPM1-225ENST00000560679 KINO60870 393 aaKnown RBP11.18□□□□□ -0.62
TPM1-225ENST00000560679 EFEMP2O95967 443 aa11.18□□□□□ -0.62
TPM1-225ENST00000560679 SOD2P04179 222 aa11.18□□□□□ -0.62
TPM1-225ENST00000560679 ATXN1P54253 815 aaKnown RBP11.18□□□□□ -0.62
TPM1-225ENST00000560679 SETQ01105 290 aaPredicted RBP11.18□□□□□ -0.62
TPM1-225ENST00000560679 RNASELQ05823 741 aaKnown RBP11.18□□□□□ -0.62
TPM1-225ENST00000560679 NONOQ15233 471 aaKnown RBP eCLIP11.18□□□□□ -0.62
TPM1-225ENST00000560679 DCLRE1AQ6PJP8 1040 aa11.18□□□□□ -0.62
TPM1-225ENST00000560679 APOA5Q6Q788 366 aa11.18□□□□□ -0.62
TPM1-225ENST00000560679 AGMOQ6ZNB7 445 aa11.18□□□□□ -0.62
TPM1-225ENST00000560679 CENPQQ7L2Z9 268 aaPredicted RBP11.18□□□□□ -0.62
TPM1-225ENST00000560679 TAS1R1Q7RTX1 841 aa11.18□□□□□ -0.62
TPM1-225ENST00000560679 RNF168Q8IYW5 571 aaPredicted RBP11.18□□□□□ -0.62
TPM1-225ENST00000560679 SMG7Q92540 1137 aaKnown RBP11.18□□□□□ -0.62
TPM1-225ENST00000560679 NXPE3Q969Y0 559 aa11.18□□□□□ -0.62
TPM1-225ENST00000560679 RPS6KC1Q96S38 1066 aa11.18□□□□□ -0.62
TPM1-225ENST00000560679 FDXACB1Q9BRP7 624 aaPredicted RBP11.18□□□□□ -0.62
TPM1-225ENST00000560679 HERC2P3Q9BVR0 1158 aa11.18□□□□□ -0.62
TPM1-225ENST00000560679 NUMBLQ9Y6R0 609 aa11.18□□□□□ -0.62
TPM1-225ENST00000560679 IGKV6-21A0A0C4DH24 114 aa11.17□□□□□ -0.62
TPM1-225ENST00000560679 F8W810 466 aa11.17□□□□□ -0.62
TPM1-225ENST00000560679 hCG_1984214I3L0E3 225 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms