RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 GLRA2P23416 452 aa14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 RAB27AP51159 221 aa14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 PTENP60484 403 aa14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 SF3A1Q15459 793 aaKnown RBP14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 ARL6IP4Q66PJ3 421 aaKnown RBP14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 EP400NLQ6ZTU2 488 aa14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 ZBTB8OSQ8IWT0 167 aa14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 THNSL1Q8IYQ7 743 aa14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 RASSF8Q8NHQ8 419 aa14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 SNX21Q969T3 373 aa14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 PLIN2Q99541 437 aa14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 FAM105AQ9NUU6 356 aa14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 TYW1Q9NV66 732 aaKnown RBP14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 UNC80Q8N2C7 3258 aa14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 FNDC1Q4ZHG4 1894 aaPredicted RBP14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 GRM6O15303 877 aa14.37□□□□□ -0.11
CTDSPL2-209ENST00000560620 CYP11B2P19099 503 aa14.37□□□□□ -0.11
CTDSPL2-209ENST00000560620 CEBPZQ03701 1054 aaKnown RBP14.37□□□□□ -0.11
CTDSPL2-209ENST00000560620 NOTUMQ6P988 496 aa14.37□□□□□ -0.11
CTDSPL2-209ENST00000560620 LRRC43Q8N309 656 aa14.37□□□□□ -0.11
CTDSPL2-209ENST00000560620 KLHL23Q8NBE8 558 aa14.37□□□□□ -0.11
CTDSPL2-209ENST00000560620 SPRYD3Q8NCJ5 442 aa14.37□□□□□ -0.11
CTDSPL2-209ENST00000560620 LPPQ93052 612 aa14.37□□□□□ -0.11
CTDSPL2-209ENST00000560620 P2RX5Q93086 422 aa14.37□□□□□ -0.11
CTDSPL2-209ENST00000560620 PGBD4Q96DM1 585 aa14.37□□□□□ -0.11
CTDSPL2-209ENST00000560620 CPB2Q96IY4 423 aa14.37□□□□□ -0.11
CTDSPL2-209ENST00000560620 IFT74Q96LB3 600 aa14.37□□□□□ -0.11
CTDSPL2-209ENST00000560620 CASD1Q96PB1 797 aa14.37□□□□□ -0.11
CTDSPL2-209ENST00000560620 TRIM6Q9C030 488 aaPredicted RBP14.37□□□□□ -0.11
CTDSPL2-209ENST00000560620 HCSTQ9UBK5 93 aa14.37□□□□□ -0.11
CTDSPL2-209ENST00000560620 INPP5FQ9Y2H2 1132 aa14.37□□□□□ -0.11
CTDSPL2-209ENST00000560620 KIAA1671Q9BY89 1806 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 STX6O43752 255 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 TSPAN1O60635 241 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 EYA4O95677 639 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 LINC00271P0C7V0 271 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 LAG3P18627 525 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 AXLP30530 894 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 UBA7P41226 1012 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 RNASELQ05823 741 aaKnown RBP14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 POU5F1BQ06416 359 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 PPP2R5AQ15172 486 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 PCBP1Q15365 356 aaKnown RBP eCLIP14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 TIGD5Q53EQ6 642 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 NAALADL2Q58DX5 795 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 CLLU1OSQ5K130 101 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 GLB1LQ6UWU2 654 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 CABP7Q86V35 215 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 DEPTORQ8TB45 409 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 MICAL1Q8TDZ2 1067 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 MRPL9Q9BYD2 267 aaKnown RBP14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 NT5C3AQ9H0P0 336 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 POLD4Q9HCU8 107 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 PLAGL2Q9UPG8 496 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 PCDHB2Q9Y5E7 798 aa14.36□□□□□ -0.11
CTDSPL2-209ENST00000560620 ITGB1P05556 798 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 ATF7P17544 494 aaPredicted RBP14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 HOXA11P31270 313 aaPredicted RBP14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 NAMPTP43490 491 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 MRPS5P82675 430 aaKnown RBP14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 MBTD1Q05BQ5 628 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 CSPP1Q1MSJ5 1256 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 AAK1Q2M2I8 961 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 FAM173BQ6P4H8 233 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 ZNF598Q86UK7 904 aaKnown RBP14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 COLGALT1Q8NBJ5 622 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 POF1BQ8WVV4 589 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 ATXN2LQ8WWM7 1075 aaKnown RBP14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 KIFAP3Q92845 792 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 HLA-CQ95604 372 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 CALML4Q96GE6 196 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 AK8Q96MA6 479 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 MMTAG2Q9BU76 263 aaKnown RBP14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 TRAIPQ9BWF2 469 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 APOL6Q9BWW8 343 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 NFKBIZQ9BYH8 718 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 GBP3Q9H0R5 595 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 LMAN2LQ9H0V9 348 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 C2orf40Q9H1Z8 148 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 NSUN3Q9H649 340 aaKnown RBP14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 CLIC4Q9Y696 253 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 REV3LO60673 3130 aa14.35□□□□□ -0.11
CTDSPL2-209ENST00000560620 CCDC169A6NNP5 214 aa14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 B4GALT5O43286 388 aa14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 ZC3H11AO75152 810 aaKnown RBP eCLIP14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 FGF18O76093 207 aa14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 ITGA4P13612 1032 aa14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 PBX3P40426 434 aa14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 ALDH7A1P49419 539 aaKnown RBP14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 TFF2Q03403 129 aa14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 RAD51AP2Q09MP3 1159 aa14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 RESTQ13127 1097 aa14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 TCEAL5Q5H9L2 206 aa14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 FOXD4L5Q5VV16 416 aaPredicted RBP14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 LRRC55Q6ZSA7 311 aa14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 IFNLR1Q8IU57 520 aaPredicted RBP14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 HACE1Q8IYU2 909 aa14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 URGCPQ8TCY9 931 aa14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 FOXD4L4Q8WXT5 416 aaPredicted RBP14.34□□□□□ -0.11
CTDSPL2-209ENST00000560620 ZNF558Q96NG5 402 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms