RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 GIT2Q14161 759 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 FAM102BQ5T8I3 360 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 PARM1Q6UWI2 310 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 CYP26C1Q6V0L0 522 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 GET4Q7L5D6 327 aaPredicted RBP7.57□□□□□ -1.2
HERC1-208ENST00000560462 DNERQ8NFT8 737 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 CMASQ8NFW8 434 aaPredicted RBP7.57□□□□□ -1.2
HERC1-208ENST00000560462 CHURC1Q8WUH1 139 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 AUTS2Q8WXX7 1259 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 FCRL3Q96P31 734 aaPredicted RBP7.57□□□□□ -1.2
HERC1-208ENST00000560462 RIOK1Q9BRS2 568 aaKnown RBP7.57□□□□□ -1.2
HERC1-208ENST00000560462 C16orf70Q9BSU1 422 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 AGO3Q9H9G7 860 aaKnown RBP7.57□□□□□ -1.2
HERC1-208ENST00000560462 SETD4Q9NVD3 440 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 IL17BQ9UHF5 180 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 DOLKQ9UPQ8 538 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 IRAK3Q9Y616 596 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 DOPEY2Q9Y3R5 2298 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 CCDC195A0A1B0GUA6 201 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 TEX51A0A1B0GUA7 166 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 H3BRB1 525 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 K7ESF4 209 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 CDX4O14627 284 aaPredicted RBP7.56□□□□□ -1.2
HERC1-208ENST00000560462 ICMTO60725 284 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 VAMP4O75379 141 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 RPP40O75818 363 aaKnown RBP7.56□□□□□ -1.2
HERC1-208ENST00000560462 TCF3P15923 654 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 ALDH7A1P49419 539 aaKnown RBP7.56□□□□□ -1.2
HERC1-208ENST00000560462 SNAP25P60880 206 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 TTC39AQ5SRH9 613 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 RNF20Q5VTR2 975 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 PCSK4Q6UW60 755 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 C16orf86Q6ZW13 317 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 RSPH3Q86UC2 560 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 FAM160B2Q86V87 743 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 WDR5BQ86VZ2 330 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 SPEM1Q8N4L4 309 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 ANKK1Q8NFD2 765 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 GAB3Q8WWW8 586 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 TUT1Q9H6E5 874 aaKnown RBP7.56□□□□□ -1.2
HERC1-208ENST00000560462 DCP1AQ9NPI6 582 aaPredicted RBP7.56□□□□□ -1.2
HERC1-208ENST00000560462 COPRSQ9NQ92 184 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 TCP11L1Q9NUJ3 509 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 CLIP2Q9UDT6 1046 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 ZFP37Q9Y6Q3 630 aaPredicted RBP7.56□□□□□ -1.2
HERC1-208ENST00000560462 C2orf16Q68DN1 1984 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 SDK1Q7Z5N4 2213 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 FLNCQ14315 2725 aa7.56□□□□□ -1.2
HERC1-208ENST00000560462 SETD2Q9BYW2 2564 aaPredicted RBP7.55□□□□□ -1.2
HERC1-208ENST00000560462 MYH8P13535 1937 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 LOXHD1Q8IVV2 1947 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 MAGEB6P1A0A0J9YX57 407 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 C2CD2LO14523 706 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 APAF1O14727 1248 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 PAPSS2O95340 614 aaPredicted RBP7.55□□□□□ -1.2
HERC1-208ENST00000560462 CAVIN2O95810 425 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 CCDC192P0DO97 292 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 POU3F2P20265 443 aaPredicted RBP7.55□□□□□ -1.2
HERC1-208ENST00000560462 ZAP70P43403 619 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 CLCN4P51793 760 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 ARHGAP4P98171 946 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 TAF1BQ53T94 588 aaPredicted RBP7.55□□□□□ -1.2
HERC1-208ENST00000560462 RNF207Q6ZRF8 634 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 MTSS1LQ765P7 747 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 KRT25Q7Z3Z0 450 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 VPS52Q8N1B4 723 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 GMCL1P1Q8NEA9 526 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 SDR42E1Q8WUS8 393 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 SMG7Q92540 1137 aaKnown RBP7.55□□□□□ -1.2
HERC1-208ENST00000560462 PHKBQ93100 1093 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 SPATA33Q96N06 139 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 RHOBTB2Q9BYZ6 727 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 BCL11AQ9H165 835 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 ZBP1Q9H171 429 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 LMAN1LQ9HAT1 526 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 HEBP1Q9NRV9 189 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 TSR3Q9UJK0 312 aaKnown RBP7.55□□□□□ -1.2
HERC1-208ENST00000560462 PADI3Q9ULW8 664 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 SUPT16HQ9Y5B9 1047 aaKnown RBP7.55□□□□□ -1.2
HERC1-208ENST00000560462 CDY2AQ9Y6F7 541 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 COL6A6A6NMZ7 2263 aa7.55□□□□□ -1.2
HERC1-208ENST00000560462 NF1P21359 2839 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 POLQO75417 2590 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 MAN2B1O00754 1011 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 KHNYNO15037 678 aaKnown RBP7.54□□□□□ -1.2
HERC1-208ENST00000560462 ICAM1P05362 532 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 FGFR1P11362 822 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 KLRC2P26717 231 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 HOXA6P31267 233 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 RARSP54136 660 aaKnown RBP7.54□□□□□ -1.2
HERC1-208ENST00000560462 ADAM17P78536 824 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 CREB5Q02930 508 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 PAK2Q13177 524 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 HSDL1Q3SXM5 330 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 TAF2Q6P1X5 1199 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 ELMSAN1Q6PJG2 1045 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 TMED8Q6PL24 325 aaPredicted RBP7.54□□□□□ -1.2
HERC1-208ENST00000560462 AMOTL1Q8IY63 956 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 SLC39A11Q8N1S5 342 aa7.54□□□□□ -1.2
HERC1-208ENST00000560462 STAG1Q8WVM7 1258 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms