RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 AP1M1Q9BXS5 423 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 SUCLA2Q9P2R7 463 aaPredicted RBP14.37□□□□□ -0.11
TRAF3-208ENST00000560371 MID2Q9UJV3 735 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 PSMD14O00487 310 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 TADA2AO75478 443 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 NDUFB10O96000 172 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 NME3Q13232 169 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 CEP72Q9P209 647 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 CA4P22748 312 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 PSMC1P62191 440 aaKnown RBP14.37□□□□□ -0.11
TRAF3-208ENST00000560371 SLC16A10Q8TF71 515 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 HSPA8P11142 646 aaKnown RBP14.37□□□□□ -0.11
TRAF3-208ENST00000560371 DEFB129Q9H1M3 183 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 LCMT1Q9UIC8 334 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 POLR1AO95602 1720 aaPredicted RBP14.37□□□□□ -0.11
TRAF3-208ENST00000560371 PODXLO00592 558 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 CAMTA2O94983 1202 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 GGPS1O95749 300 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 PAPOLAP51003 745 aaKnown RBP14.37□□□□□ -0.11
TRAF3-208ENST00000560371 DRP2Q13474 957 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 SGMS1Q86VZ5 419 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 DDX27Q96GQ7 796 aaKnown RBP14.37□□□□□ -0.11
TRAF3-208ENST00000560371 TNIP3Q96KP6 325 aa14.37□□□□□ -0.11
TRAF3-208ENST00000560371 M0QYV0 167 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 DYNC1LI2O43237 492 aaPredicted RBP14.36□□□□□ -0.11
TRAF3-208ENST00000560371 ATP6V1E1P36543 226 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 SREBF2Q12772 1141 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 TAF1BQ53T94 588 aaPredicted RBP14.36□□□□□ -0.11
TRAF3-208ENST00000560371 PRAMEF18Q5VWM3 479 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 KRT39Q6A163 491 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 SPON2Q9BUD6 331 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 SLC13A4Q9UKG4 626 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 CCL15-CCL14A0A0B4J2E2 113 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 ENTPD3O75355 529 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 RARBP10826 455 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 IL1RL1Q01638 556 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 CCL15Q16663 113 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 HHIPL2Q6UWX4 724 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 N4BP2L2Q92802 583 aaPredicted RBP14.36□□□□□ -0.11
TRAF3-208ENST00000560371 RRAGDQ9NQL2 400 aaPredicted RBP14.36□□□□□ -0.11
TRAF3-208ENST00000560371 ZNF70Q9UC06 446 aaPredicted RBP14.36□□□□□ -0.11
TRAF3-208ENST00000560371 IQSEC2Q5JU85 1478 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 TTI1O43156 1089 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 ATP1A3P13637 1013 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 TRIM67Q6ZTA4 783 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 ENOSF1Q7L5Y1 443 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 YAF2Q8IY57 180 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 ZNF34Q8IZ26 560 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 GTF3C2Q8WUA4 911 aaPredicted RBP14.36□□□□□ -0.11
TRAF3-208ENST00000560371 TUFT1Q9NNX1 390 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 CYP26B1Q9NR63 512 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 TRIM49BA6NDI0 452 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 CYP2B6P20813 491 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 GMPSP49915 693 aaPredicted RBP14.36□□□□□ -0.11
TRAF3-208ENST00000560371 ZNF543Q08ER8 600 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 ZKSCAN8Q15776 578 aaPredicted RBP14.36□□□□□ -0.11
TRAF3-208ENST00000560371 BARGINQ6ZT62 677 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 HAUS6Q7Z4H7 955 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 SIK2Q9H0K1 926 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 DYRK4Q9NR20 520 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 GNGT2O14610 69 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 FGGP02679 453 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 KRT7P08729 469 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 GABPB1Q06547 395 aaPredicted RBP14.36□□□□□ -0.11
TRAF3-208ENST00000560371 CC2D1AQ6P1N0 951 aaPredicted RBP14.36□□□□□ -0.11
TRAF3-208ENST00000560371 GPD1LQ8N335 351 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 ASIC4Q96FT7 647 aa14.36□□□□□ -0.11
TRAF3-208ENST00000560371 LGALS16A8MUM7 142 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 APOEP02649 317 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 SLCO1A2P46721 670 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 RABL6Q3YEC7 729 aaPredicted RBP14.35□□□□□ -0.11
TRAF3-208ENST00000560371 ANKRD13AQ8IZ07 590 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 RNF217Q8TC41 542 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 RGL1Q9NZL6 768 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 TJP2Q9UDY2 1190 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 ORC6Q9Y5N6 252 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 IQANK1A0A1B0GTG1 560 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 RALAP11233 206 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 RPS12P25398 132 aaKnown RBP14.35□□□□□ -0.11
TRAF3-208ENST00000560371 EPHA7Q15375 998 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 CDC42EP5Q6NZY7 148 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 TRIM72Q6ZMU5 477 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 SCYL3Q8IZE3 742 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 FAM151AQ8WW52 585 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 TACO1Q9BSH4 297 aaKnown RBP14.35□□□□□ -0.11
TRAF3-208ENST00000560371 Q9H521 79 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 RAD51Q06609 339 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 SP110Q9HB58 689 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 PDE11AQ9HCR9 933 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 UPP2O95045 317 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 CLTAP09496 248 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 OCRLQ01968 901 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 SRBD1Q8N5C6 995 aaKnown RBP14.35□□□□□ -0.11
TRAF3-208ENST00000560371 CD163L1Q9NR16 1453 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 CETPP11597 493 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 GRIK1P39086 918 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 SLC7A5Q01650 507 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 FAM102AQ5T9C2 384 aaPredicted RBP14.35□□□□□ -0.11
TRAF3-208ENST00000560371 SPDL1Q96EA4 605 aa14.35□□□□□ -0.11
TRAF3-208ENST00000560371 CALR3Q96L12 384 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms