RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 KCNG1Q9UIX4 513 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 HACL1Q9UJ83 578 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 TMEM59LQ9UK28 342 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 AJAP1Q9UKB5 411 aaPredicted RBP8.79□□□□□ -1
SMAD3-212ENST00000559937 ADAMTS5Q9UNA0 930 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 SAMM50Q9Y512 469 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 OTOFQ9HC10 1997 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 PFASO15067 1338 aa8.79□□□□□ -1
SMAD3-212ENST00000559937 ZC3H4Q9UPT8 1303 aaKnown RBP8.79□□□□□ -1
SMAD3-212ENST00000559937 H0YCG3 227 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 CCDC188H7C350 402 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 FTCDO95954 541 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 TRIM49P0CI25 452 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 TRIM49CP0CI26 452 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 EIF2AK2P19525 551 aaKnown RBP8.78□□□□□ -1
SMAD3-212ENST00000559937 GMPSP49915 693 aaPredicted RBP8.78□□□□□ -1
SMAD3-212ENST00000559937 SMTNP53814 917 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 GALCP54803 685 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 SPP2Q13103 211 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 MTMR2Q13614 643 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 CBWD6Q4V339 395 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 XKR9Q5GH70 373 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 CBWD3Q5JTY5 395 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 CBWD5Q5RIA9 395 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 ALS2CLQ60I27 953 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 MAP4K3Q8IVH8 894 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 MICALL2Q8IY33 904 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 RASGEF1CQ8N431 466 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 MREGQ8N565 214 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 ZNF280CQ8ND82 737 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 LNX1Q8TBB1 728 aaPredicted RBP8.78□□□□□ -1
SMAD3-212ENST00000559937 TMC2Q8TDI7 906 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 U2AF1L4Q8WU68 220 aaKnown RBP8.78□□□□□ -1
SMAD3-212ENST00000559937 SCFD2Q8WU76 684 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 ATP6V0A1Q93050 837 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 CCDC102AQ96A19 550 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 NTPCRQ9BSD7 190 aaKnown RBP8.78□□□□□ -1
SMAD3-212ENST00000559937 MOV10L1Q9BXT6 1211 aaKnown RBP8.78□□□□□ -1
SMAD3-212ENST00000559937 POLD4Q9HCU8 107 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 GDF3Q9NR23 364 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 PICK1Q9NRD5 415 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 RBM12Q9NTZ6 932 aaKnown RBP8.78□□□□□ -1
SMAD3-212ENST00000559937 HSPBP1Q9NZL4 362 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 ADAM21Q9UKJ8 722 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 TTC7AQ9ULT0 858 aaPredicted RBP8.78□□□□□ -1
SMAD3-212ENST00000559937 STXBP5LQ9Y2K9 1186 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 POLR2AP24928 1970 aaKnown RBP8.78□□□□□ -1
SMAD3-212ENST00000559937 SBF1O95248 1867 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 SSC5DA1L4H1 1573 aa8.78□□□□□ -1
SMAD3-212ENST00000559937 ANKRD62A6NC57 917 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 BHMG1C9JSJ3 638 aaPredicted RBP8.77□□□□□ -1.01
SMAD3-212ENST00000559937 PGRMC1O00264 195 aaKnown RBP8.77□□□□□ -1.01
SMAD3-212ENST00000559937 BACH1O14867 736 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 OPA1O60313 960 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 PSAPP07602 524 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 NR3C2P08235 984 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 ZBTB48P10074 688 aaPredicted RBP8.77□□□□□ -1.01
SMAD3-212ENST00000559937 MYBL2P10244 700 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 MYCLP12524 364 aaPredicted RBP8.77□□□□□ -1.01
SMAD3-212ENST00000559937 PTPRAP18433 802 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 TNFAIP3P21580 790 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 CXCR5P32302 372 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 GTF2H1P32780 548 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 NOP2P46087 812 aaKnown RBP8.77□□□□□ -1.01
SMAD3-212ENST00000559937 C1QTNF8P60827 252 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 PPATQ06203 517 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 ENOX2Q16206 610 aaKnown RBP8.77□□□□□ -1.01
SMAD3-212ENST00000559937 PPP2R5EQ16537 467 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 UGCGQ16739 394 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 NBPF12Q5TAG4 269 aaPredicted RBP8.77□□□□□ -1.01
SMAD3-212ENST00000559937 SMYD5Q6GMV2 418 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 GJB7Q6PEY0 223 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 NSMFQ6X4W1 530 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 PEX26Q7Z412 305 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 USP37Q86T82 979 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 GPIHBP1Q8IV16 184 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 KSR1Q8IVT5 923 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 RHOT2Q8IXI1 618 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 MCPH1Q8NEM0 835 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 MORC4Q8TE76 937 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 NSUN6Q8TEA1 469 aaKnown RBP8.77□□□□□ -1.01
SMAD3-212ENST00000559937 WHAMMQ8TF30 809 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 CTNNBL1Q8WYA6 563 aaPredicted RBP8.77□□□□□ -1.01
SMAD3-212ENST00000559937 ATG4CQ96DT6 458 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 ZFP91Q96JP5 570 aaPredicted RBP8.77□□□□□ -1.01
SMAD3-212ENST00000559937 FAM81BQ96LP2 452 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 GPR88Q9GZN0 384 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 IKZF4Q9H2S9 585 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 SLITRK6Q9H5Y7 841 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 SUGCTQ9HAC7 445 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 ZCCHC17Q9NP64 241 aaKnown RBP8.77□□□□□ -1.01
SMAD3-212ENST00000559937 PKD2L1Q9P0L9 805 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 CNOT7Q9UIV1 285 aaKnown RBP8.77□□□□□ -1.01
SMAD3-212ENST00000559937 AMFRQ9UKV5 643 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 COQ4Q9Y3A0 265 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 PCDHA10Q9Y5I2 948 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 EMSYQ7Z589 1322 aa8.77□□□□□ -1.01
SMAD3-212ENST00000559937 MIF4GDA9UHW6 222 aaKnown RBP8.76□□□□□ -1.01
SMAD3-212ENST00000559937 GOLGA8KD6RF30 607 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 TULP1O00294 542 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms