RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 CNGB1Q14028 1251 aaPredicted RBP5.33□□□□□ -1.56
SPG11-218ENST00000559754 ACAP1Q15027 740 aa5.33□□□□□ -1.56
SPG11-218ENST00000559754 PCBP1Q15365 356 aaKnown RBP eCLIP5.33□□□□□ -1.56
SPG11-218ENST00000559754 DALRD3Q5D0E6 543 aaKnown RBP5.33□□□□□ -1.56
SPG11-218ENST00000559754 SPTY2D1Q68D10 685 aaPredicted RBP5.33□□□□□ -1.56
SPG11-218ENST00000559754 TUBA3EQ6PEY2 450 aa5.33□□□□□ -1.56
SPG11-218ENST00000559754 UNQ6494/PRO21346Q6UXR6 183 aa5.33□□□□□ -1.56
SPG11-218ENST00000559754 KIAA0907Q7Z7F0 614 aaPredicted RBP5.33□□□□□ -1.56
SPG11-218ENST00000559754 SMC1BQ8NDV3 1235 aa5.33□□□□□ -1.56
SPG11-218ENST00000559754 CACTINQ8WUQ7 758 aaKnown RBP5.33□□□□□ -1.56
SPG11-218ENST00000559754 ARL8AQ96BM9 186 aa5.33□□□□□ -1.56
SPG11-218ENST00000559754 TARS2Q9BW92 718 aaKnown RBP5.33□□□□□ -1.56
SPG11-218ENST00000559754 MRIQ9BWK5 157 aa5.33□□□□□ -1.56
SPG11-218ENST00000559754 PCED1AQ9H1Q7 454 aa5.33□□□□□ -1.56
SPG11-218ENST00000559754 MSRAQ9UJ68 235 aa5.33□□□□□ -1.56
SPG11-218ENST00000559754 NRP1O14786 923 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 NRP2O60462 931 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 MFAP3LO75121 409 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 PCDH8O95206 1070 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 SLPIP03973 132 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 C1SP09871 688 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 XPAP23025 273 aaPredicted RBP5.32□□□□□ -1.56
SPG11-218ENST00000559754 MAN2A2P49641 1150 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 GPR15P49685 360 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 NPEPPSP55786 919 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 IL2P60568 153 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 RRP1BQ14684 758 aaKnown RBP5.32□□□□□ -1.56
SPG11-218ENST00000559754 ELAVL1Q15717 326 aaKnown RBP5.32□□□□□ -1.56
SPG11-218ENST00000559754 CCDC178Q5BJE1 867 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 FKBP15Q5T1M5 1219 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 NOP9Q86U38 636 aaKnown RBP5.32□□□□□ -1.56
SPG11-218ENST00000559754 JAZF1Q86VZ6 243 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 UNC5BQ8IZJ1 945 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 CMTM4Q8IZR5 234 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 ZNF610Q8N9Z0 462 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 GPR101Q96P66 508 aaPredicted RBP5.32□□□□□ -1.56
SPG11-218ENST00000559754 WNT8AQ9H1J5 351 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 KCNG1Q9UIX4 513 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 PCDHB6Q9Y5E3 794 aa5.32□□□□□ -1.56
SPG11-218ENST00000559754 ELL2O00472 640 aaPredicted RBP5.31□□□□□ -1.56
SPG11-218ENST00000559754 ENPP3O14638 875 aa5.31□□□□□ -1.56
SPG11-218ENST00000559754 TGM5O43548 720 aa5.31□□□□□ -1.56
SPG11-218ENST00000559754 IPO13O94829 963 aaKnown RBP5.31□□□□□ -1.56
SPG11-218ENST00000559754 PEX11BO96011 259 aa5.31□□□□□ -1.56
SPG11-218ENST00000559754 SPIDRQ14159 915 aa5.31□□□□□ -1.56
SPG11-218ENST00000559754 FRMD7Q6ZUT3 714 aa5.31□□□□□ -1.56
SPG11-218ENST00000559754 PPP1R14CQ8TAE6 165 aa5.31□□□□□ -1.56
SPG11-218ENST00000559754 RSAD2Q8WXG1 361 aa5.31□□□□□ -1.56
SPG11-218ENST00000559754 SPTLC3Q9NUV7 552 aa5.31□□□□□ -1.56
SPG11-218ENST00000559754 NCDNQ9UBB6 729 aa5.31□□□□□ -1.56
SPG11-218ENST00000559754 A0A0A6YYK5 440 aaPredicted RBP5.3□□□□□ -1.56
SPG11-218ENST00000559754 NARSO43776 548 aaKnown RBP5.3□□□□□ -1.56
SPG11-218ENST00000559754 RAB11FIP3O75154 756 aa5.3□□□□□ -1.56
SPG11-218ENST00000559754 FKBP9O95302 570 aa5.3□□□□□ -1.56
SPG11-218ENST00000559754 PFKMP08237 780 aa5.3□□□□□ -1.56
SPG11-218ENST00000559754 GAAP10253 952 aa5.3□□□□□ -1.56
SPG11-218ENST00000559754 NRG3P56975 720 aa5.3□□□□□ -1.56
SPG11-218ENST00000559754 DGCR2P98153 550 aa5.3□□□□□ -1.56
SPG11-218ENST00000559754 TERF2Q15554 542 aa5.3□□□□□ -1.56
SPG11-218ENST00000559754 FKBP9P1Q75LS8 142 aa5.3□□□□□ -1.56
SPG11-218ENST00000559754 AMER2Q8N7J2 671 aa5.3□□□□□ -1.56
SPG11-218ENST00000559754 ZNF496Q96IT1 587 aaPredicted RBP5.3□□□□□ -1.56
SPG11-218ENST00000559754 ZNF512Q96ME7 567 aaPredicted RBP5.3□□□□□ -1.56
SPG11-218ENST00000559754 SOX7Q9BT81 388 aa5.3□□□□□ -1.56
SPG11-218ENST00000559754 GPR87Q9BY21 358 aa5.3□□□□□ -1.56
SPG11-218ENST00000559754 CEP72Q9P209 647 aa5.3□□□□□ -1.56
SPG11-218ENST00000559754 HECAQ9UBI9 543 aaPredicted RBP5.3□□□□□ -1.56
SPG11-218ENST00000559754 MAPRE3Q9UPY8 281 aa5.3□□□□□ -1.56
SPG11-218ENST00000559754 GOLGA6L6A8MZA4 724 aa5.29□□□□□ -1.56
SPG11-218ENST00000559754 ALDH1A2O94788 518 aa5.29□□□□□ -1.56
SPG11-218ENST00000559754 GNAT2P19087 354 aa5.29□□□□□ -1.56
SPG11-218ENST00000559754 MAKP20794 623 aa5.29□□□□□ -1.56
SPG11-218ENST00000559754 CANXP27824 592 aaKnown RBP5.29□□□□□ -1.56
SPG11-218ENST00000559754 TGFB2P61812 414 aa5.29□□□□□ -1.56
SPG11-218ENST00000559754 KLF10Q13118 480 aa5.29□□□□□ -1.56
SPG11-218ENST00000559754 FHL2Q14192 279 aa5.29□□□□□ -1.56
SPG11-218ENST00000559754 SEPT7Q16181 437 aaKnown RBP5.29□□□□□ -1.56
SPG11-218ENST00000559754 ZBTB41Q5SVQ8 909 aa5.29□□□□□ -1.56
SPG11-218ENST00000559754 Q6ZRM9 215 aa5.29□□□□□ -1.56
SPG11-218ENST00000559754 APBB1IPQ7Z5R6 666 aaPredicted RBP5.29□□□□□ -1.56
SPG11-218ENST00000559754 FAM177A1Q8N128 213 aaPredicted RBP5.29□□□□□ -1.56
SPG11-218ENST00000559754 ZNF483Q8TF39 744 aaPredicted RBP5.29□□□□□ -1.56
SPG11-218ENST00000559754 GAB3Q8WWW8 586 aa5.29□□□□□ -1.56
SPG11-218ENST00000559754 USP18Q9UMW8 372 aa5.29□□□□□ -1.56
SPG11-218ENST00000559754 NUMBLQ9Y6R0 609 aa5.29□□□□□ -1.56
SPG11-218ENST00000559754 GSG1L2A8MUP6 293 aa5.28□□□□□ -1.56
SPG11-218ENST00000559754 PDE8AO60658 829 aa5.28□□□□□ -1.56
SPG11-218ENST00000559754 SEC24DO94855 1032 aaPredicted RBP5.28□□□□□ -1.56
SPG11-218ENST00000559754 ADH4P08319 380 aa5.28□□□□□ -1.56
SPG11-218ENST00000559754 ADCYAP1R1P41586 468 aa5.28□□□□□ -1.56
SPG11-218ENST00000559754 SCNN1GP51170 649 aa5.28□□□□□ -1.56
SPG11-218ENST00000559754 DDB1Q16531 1140 aa5.28□□□□□ -1.56
SPG11-218ENST00000559754 PLEKHG4Q58EX7 1191 aa5.28□□□□□ -1.56
SPG11-218ENST00000559754 LMBR1LQ6UX01 489 aa5.28□□□□□ -1.56
SPG11-218ENST00000559754 CXorf67Q86X51 503 aaPredicted RBP5.28□□□□□ -1.56
SPG11-218ENST00000559754 GLB1L2Q8IW92 636 aa5.28□□□□□ -1.56
SPG11-218ENST00000559754 MDGA1Q8NFP4 955 aa5.28□□□□□ -1.56
SPG11-218ENST00000559754 LEO1Q8WVC0 666 aaPredicted RBP5.28□□□□□ -1.56
SPG11-218ENST00000559754 ATXN2LQ8WWM7 1075 aaKnown RBP5.28□□□□□ -1.56
SPG11-218ENST00000559754 ST8SIA2Q92186 375 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms