RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 CDH22Q9UJ99 828 aa14.71□□□□□ -0.05
TPM1-220ENST00000559556 IRAK3Q9Y616 596 aa14.71□□□□□ -0.05
TPM1-220ENST00000559556 NOTCH4Q99466 2003 aa14.71□□□□□ -0.05
TPM1-220ENST00000559556 NT5C1B-RDH14C9J2C7 533 aa14.7□□□□□ -0.06
TPM1-220ENST00000559556 CLASP2O75122 1294 aaKnown RBP14.7□□□□□ -0.06
TPM1-220ENST00000559556 RAB27AP51159 221 aa14.7□□□□□ -0.06
TPM1-220ENST00000559556 POLGP54098 1239 aaPredicted RBP14.7□□□□□ -0.06
TPM1-220ENST00000559556 TCF15Q12870 199 aa14.7□□□□□ -0.06
TPM1-220ENST00000559556 CES5AQ6NT32 575 aa14.7□□□□□ -0.06
TPM1-220ENST00000559556 ANO5Q75V66 913 aa14.7□□□□□ -0.06
TPM1-220ENST00000559556 TMEM173Q86WV6 379 aaPredicted RBP14.7□□□□□ -0.06
TPM1-220ENST00000559556 RHPN2Q8IUC4 686 aa14.7□□□□□ -0.06
TPM1-220ENST00000559556 PHOX2BQ99453 314 aa14.7□□□□□ -0.06
TPM1-220ENST00000559556 SH2D3AQ9BRG2 576 aa14.7□□□□□ -0.06
TPM1-220ENST00000559556 ADAM7Q9H2U9 754 aa14.7□□□□□ -0.06
TPM1-220ENST00000559556 FAM105AQ9NUU6 356 aa14.7□□□□□ -0.06
TPM1-220ENST00000559556 TBC1D13Q9NVG8 400 aa14.7□□□□□ -0.06
TPM1-220ENST00000559556 SUCLA2Q9P2R7 463 aaPredicted RBP14.7□□□□□ -0.06
TPM1-220ENST00000559556 PIN4Q9Y237 131 aaKnown RBP14.7□□□□□ -0.06
TPM1-220ENST00000559556 CACNA1AO00555 2505 aa14.7□□□□□ -0.06
TPM1-220ENST00000559556 PATJQ8NI35 1801 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.69□□□□□ -0.06
TPM1-220ENST00000559556 MEIS3P2A8K0S8 358 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 CPLX1O14810 134 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 SLC37A4O43826 429 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 ZNF623O75123 536 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 SP100P23497 879 aaPredicted RBP14.69□□□□□ -0.06
TPM1-220ENST00000559556 MTHFRP42898 656 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 VCPP55072 806 aaKnown RBP14.69□□□□□ -0.06
TPM1-220ENST00000559556 PSMC5P62195 406 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 PPP2R5CQ13362 524 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 BMS1Q14692 1282 aaKnown RBP14.69□□□□□ -0.06
TPM1-220ENST00000559556 NONOQ15233 471 aaKnown RBP eCLIP14.69□□□□□ -0.06
TPM1-220ENST00000559556 KIAA1841Q6NSI8 718 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 GLB1LQ6UWU2 654 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 DDX53Q86TM3 631 aaKnown RBP14.69□□□□□ -0.06
TPM1-220ENST00000559556 VPS52Q8N1B4 723 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 LPPQ93052 612 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 IGSF21Q96ID5 467 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 AIFM3Q96NN9 605 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 JPH2Q9BR39 696 aaPredicted RBP14.69□□□□□ -0.06
TPM1-220ENST00000559556 NRDE2Q9H7Z3 1164 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 IFT122Q9HBG6 1241 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 AGPAT5Q9NUQ2 364 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 DZANK1Q9NVP4 752 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 DDX25Q9UHL0 483 aaKnown RBP14.69□□□□□ -0.06
TPM1-220ENST00000559556 VAV3Q9UKW4 847 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 SORCS3Q9UPU3 1222 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 CYP46A1Q9Y6A2 500 aa14.69□□□□□ -0.06
TPM1-220ENST00000559556 DDX11L8A8MPP1 907 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 C2CD4DB7Z1M9 353 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 CXCL14O95715 111 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 CTSAP10619 480 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 GIT2Q14161 759 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 INF2Q27J81 1249 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 NOMO2Q5JPE7 1267 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 PLA2G4FQ68DD2 849 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 CATSPER4Q7RTX7 472 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 KRT25Q7Z3Z0 450 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 ZBTB33Q86T24 672 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 KSR1Q8IVT5 923 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 UBALD2Q8IYN6 164 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 KREMEN2Q8NCW0 462 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 BCL7CQ8WUZ0 217 aaPredicted RBP14.68□□□□□ -0.06
TPM1-220ENST00000559556 RIPOR3Q96MK2 946 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 NLRP4Q96MN2 994 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 TM6SF1Q9BZW5 370 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 KCNMB3Q9NPA1 279 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 CYP26B1Q9NR63 512 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 TSHZ2Q9NRE2 1034 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 COL4A3BPQ9Y5P4 624 aa14.68□□□□□ -0.06
TPM1-220ENST00000559556 ANK1P16157 1881 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 CEP250Q9BV73 2442 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 EML1O00423 815 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 B4GALT3O60512 393 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 OFD1O75665 1012 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 GALTP07902 379 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 AVPR2P30518 371 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 CA8P35219 290 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 QARSP47897 775 aaKnown RBP14.67□□□□□ -0.06
TPM1-220ENST00000559556 RNASELQ05823 741 aaKnown RBP14.67□□□□□ -0.06
TPM1-220ENST00000559556 MTMR3Q13615 1198 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 RARS2Q5T160 578 aaKnown RBP14.67□□□□□ -0.06
TPM1-220ENST00000559556 CPLX2Q6PUV4 134 aaKnown RBP14.67□□□□□ -0.06
TPM1-220ENST00000559556 SLC22A17Q8WUG5 538 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 AUTS2Q8WXX7 1259 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 FAM20AQ96MK3 541 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 PHF20Q9BVI0 1012 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 VN1R3Q9BXE9 311 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 DHX33Q9H6R0 707 aaKnown RBP14.67□□□□□ -0.06
TPM1-220ENST00000559556 DNAJB4Q9UDY4 337 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 INPP5FQ9Y2H2 1132 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 PPME1Q9Y570 386 aa14.67□□□□□ -0.06
TPM1-220ENST00000559556 STK36Q9NRP7 1315 aa14.66□□□□□ -0.06
TPM1-220ENST00000559556 OTOGLQ3ZCN5 2332 aa14.66□□□□□ -0.06
TPM1-220ENST00000559556 DKC1O60832 514 aaKnown RBP eCLIP14.66□□□□□ -0.06
TPM1-220ENST00000559556 BRD1O95696 1058 aa14.66□□□□□ -0.06
TPM1-220ENST00000559556 PDGFBP01127 241 aaPredicted RBP14.66□□□□□ -0.06
TPM1-220ENST00000559556 GCFC2P16383 781 aaKnown RBP14.66□□□□□ -0.06
TPM1-220ENST00000559556 EPCAMP16422 314 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms