RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 MRPL38Q96DV4 380 aaKnown RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 CALML4Q96GE6 196 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 IFT74Q96LB3 600 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 DRC1Q96MC2 740 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 C17orf80Q9BSJ5 609 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 TRAIPQ9BWF2 469 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 MRPL9Q9BYD2 267 aaKnown RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 NFKBIZQ9BYH8 718 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 TRIM6Q9C030 488 aaPredicted RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 TMEM117Q9H0C3 514 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 POLR3FQ9H1D9 316 aaPredicted RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 BHMT2Q9H2M3 363 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 IFT122Q9HBG6 1241 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 UBN1Q9NPG3 1134 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 DDX19AQ9NUU7 478 aaKnown RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 KCND2Q9NZV8 630 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 DAXXQ9UER7 740 aaPredicted RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 PUF60Q9UHX1 559 aaKnown RBP4.85□□□□□ -1.63
SNX1-205ENST00000559339 MTCH2Q9Y6C9 303 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 DOCK5Q9H7D0 1870 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 TET1Q8NFU7 2136 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 A0A0C4DFX4 3053 aa4.85□□□□□ -1.63
SNX1-205ENST00000559339 SCN5AQ14524 2016 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 PHLPP2Q6ZVD8 1323 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 FSD2A1L4K1 749 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 EPOPA6NHQ4 379 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 RFXAPO00287 272 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 SLC26A4O43511 780 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 MGEA5O60502 916 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 NR1I2O75469 434 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 ARHGEF15O94989 841 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 EYA4O95677 639 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 SSBP05455 408 aaKnown RBP eCLIP4.84□□□□□ -1.63
SNX1-205ENST00000559339 FGFR1P11362 822 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 LAG3P18627 525 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 CYP11B2P19099 503 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 SYT1P21579 422 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 FGFR4P22455 802 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 GLRA2P23416 452 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 CDC25AP30304 524 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 PPM1AP35813 382 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 ARL2P36404 184 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 LONP1P36776 959 aaKnown RBP4.84□□□□□ -1.63
SNX1-205ENST00000559339 NAMPTP43490 491 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 EFNA5P52803 228 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 SMTNP53814 917 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 PTENP60484 403 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 FAM189BP81408 668 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 MRPS5P82675 430 aaKnown RBP4.84□□□□□ -1.63
SNX1-205ENST00000559339 UBE3AQ05086 875 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 RNASELQ05823 741 aaKnown RBP4.84□□□□□ -1.63
SNX1-205ENST00000559339 ADGRE1Q14246 886 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 DSC3Q14574 896 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 SF3A1Q15459 793 aaKnown RBP4.84□□□□□ -1.63
SNX1-205ENST00000559339 MAPK6Q16659 721 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 THNSL1Q8IYQ7 743 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 CRIPAKQ8N1N5 446 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 TMEM87AQ8NBN3 555 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 URGCPQ8TCY9 931 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 MICAL1Q8TDZ2 1067 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 LINC01599Q8WXQ3 324 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 SYMPKQ92797 1274 aaKnown RBP4.84□□□□□ -1.63
SNX1-205ENST00000559339 HLA-CQ95604 372 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 CCDC51Q96ER9 411 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 PRIMPOLQ96LW4 560 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 FAM193BQ96PV7 902 aaPredicted RBP4.84□□□□□ -1.63
SNX1-205ENST00000559339 ADPGKQ9BRR6 497 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 TIPINQ9BVW5 301 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 LMAN2LQ9H0V9 348 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 C2orf40Q9H1Z8 148 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 C17orf75Q9HAS0 396 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 XPNPEP1Q9NQW7 623 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 AGPAT5Q9NUQ2 364 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 FAM105AQ9NUU6 356 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 TYW1Q9NV66 732 aaKnown RBP4.84□□□□□ -1.63
SNX1-205ENST00000559339 PRMT7Q9NVM4 692 aaPredicted RBP4.84□□□□□ -1.63
SNX1-205ENST00000559339 KANSL3Q9P2N6 904 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 THEGQ9P2T0 379 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 STK39Q9UEW8 545 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 CCDC39Q9UFE4 941 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 COG5Q9UP83 839 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 PLAGL2Q9UPG8 496 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 PCDHB2Q9Y5E7 798 aa4.84□□□□□ -1.63
SNX1-205ENST00000559339 MRPL42Q9Y6G3 142 aaKnown RBP4.84□□□□□ -1.63
SNX1-205ENST00000559339 MYO9BQ13459 2157 aa4.84□□□□□ -1.64
SNX1-205ENST00000559339 EYSQ5T1H1 3165 aa4.83□□□□□ -1.64
SNX1-205ENST00000559339 CNTNAP2Q9UHC6 1331 aa4.83□□□□□ -1.64
SNX1-205ENST00000559339 A0A087WWV3 80 aa4.83□□□□□ -1.64
SNX1-205ENST00000559339 A0A1B0GUA9 196 aa4.83□□□□□ -1.64
SNX1-205ENST00000559339 C19orf67A6NJJ6 358 aa4.83□□□□□ -1.64
SNX1-205ENST00000559339 CCDC169A6NNP5 214 aa4.83□□□□□ -1.64
SNX1-205ENST00000559339 H0YCG3 227 aa4.83□□□□□ -1.64
SNX1-205ENST00000559339 K7ERI5 159 aa4.83□□□□□ -1.64
SNX1-205ENST00000559339 LPXNO60711 386 aa4.83□□□□□ -1.64
SNX1-205ENST00000559339 ZNF623O75123 536 aa4.83□□□□□ -1.64
SNX1-205ENST00000559339 FGF18O76093 207 aa4.83□□□□□ -1.64
SNX1-205ENST00000559339 ITGA4P13612 1032 aa4.83□□□□□ -1.64
SNX1-205ENST00000559339 GUCY2CP25092 1073 aa4.83□□□□□ -1.64
SNX1-205ENST00000559339 ABCD1P33897 745 aa4.83□□□□□ -1.64
SNX1-205ENST00000559339 CEBPZQ03701 1054 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms