RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 NPAS4Q8IUM7 802 aa20.73■□□□□ 0.91
CASC4-209ENST00000559222 SYT2Q8N9I0 419 aaPredicted RBP20.73■□□□□ 0.91
CASC4-209ENST00000559222 CALML4Q96GE6 196 aa20.73■□□□□ 0.91
CASC4-209ENST00000559222 CPB2Q96IY4 423 aa20.73■□□□□ 0.91
CASC4-209ENST00000559222 YME1L1Q96TA2 773 aa20.73■□□□□ 0.91
CASC4-209ENST00000559222 AGPAT5Q9NUQ2 364 aa20.73■□□□□ 0.91
CASC4-209ENST00000559222 HCSTQ9UBK5 93 aa20.73■□□□□ 0.91
CASC4-209ENST00000559222 TMEM265A0A087WTH1 108 aa20.72■□□□□ 0.91
CASC4-209ENST00000559222 SFI1A8K8P3 1242 aa20.72■□□□□ 0.91
CASC4-209ENST00000559222 INO80B-WBP1J3KQ70 363 aa20.72■□□□□ 0.91
CASC4-209ENST00000559222 RFXAPO00287 272 aa20.72■□□□□ 0.91
CASC4-209ENST00000559222 TSPAN1O60635 241 aa20.72■□□□□ 0.91
CASC4-209ENST00000559222 DGKIO75912 1065 aa20.72■□□□□ 0.91
CASC4-209ENST00000559222 FGFR1P11362 822 aa20.72■□□□□ 0.91
CASC4-209ENST00000559222 PDIA4P13667 645 aaKnown RBP20.72■□□□□ 0.91
CASC4-209ENST00000559222 HOXA11P31270 313 aaPredicted RBP20.72■□□□□ 0.91
CASC4-209ENST00000559222 TFDP1Q14186 410 aa20.72■□□□□ 0.91
CASC4-209ENST00000559222 PAN2Q504Q3 1202 aaKnown RBP20.72■□□□□ 0.91
CASC4-209ENST00000559222 NAALADL2Q58DX5 795 aa20.72■□□□□ 0.91
CASC4-209ENST00000559222 ODR4Q5SWX8 454 aa20.72■□□□□ 0.91
CASC4-209ENST00000559222 AXDND1Q5T1B0 1012 aaPredicted RBP20.72■□□□□ 0.91
CASC4-209ENST00000559222 CDCA2Q69YH5 1023 aaPredicted RBP20.72■□□□□ 0.91
CASC4-209ENST00000559222 SLC24A5Q71RS6 500 aa20.72■□□□□ 0.91
CASC4-209ENST00000559222 MYLIPQ8WY64 445 aa20.72■□□□□ 0.91
CASC4-209ENST00000559222 RAD54LQ92698 747 aa20.72■□□□□ 0.91
CASC4-209ENST00000559222 ZNF689Q96CS4 500 aaPredicted RBP20.72■□□□□ 0.91
CASC4-209ENST00000559222 CDX2Q99626 313 aaPredicted RBP20.72■□□□□ 0.91
CASC4-209ENST00000559222 PANK2Q9BZ23 570 aa20.72■□□□□ 0.91
CASC4-209ENST00000559222 INO80BQ9C086 356 aaPredicted RBP20.72■□□□□ 0.91
CASC4-209ENST00000559222 PRDM12Q9H4Q4 367 aa20.72■□□□□ 0.91
CASC4-209ENST00000559222 MTUS1Q9ULD2 1270 aa20.72■□□□□ 0.91
CASC4-209ENST00000559222 MEIS3P2A8K0S8 358 aa20.71■□□□□ 0.91
CASC4-209ENST00000559222 PPP6R2O75170 966 aa20.71■□□□□ 0.91
CASC4-209ENST00000559222 LINC00271P0C7V0 271 aa20.71■□□□□ 0.91
CASC4-209ENST00000559222 FAM189BP81408 668 aa20.71■□□□□ 0.91
CASC4-209ENST00000559222 LONRF3Q496Y0 759 aa20.71■□□□□ 0.91
CASC4-209ENST00000559222 UBXN11Q5T124 520 aa20.71■□□□□ 0.91
CASC4-209ENST00000559222 SHC4Q6S5L8 630 aa20.71■□□□□ 0.91
CASC4-209ENST00000559222 CDR2LQ86X02 465 aaPredicted RBP20.71■□□□□ 0.91
CASC4-209ENST00000559222 ECHDC2Q86YB7 292 aa20.71■□□□□ 0.91
CASC4-209ENST00000559222 RASSF8Q8NHQ8 419 aa20.71■□□□□ 0.91
CASC4-209ENST00000559222 C17orf80Q9BSJ5 609 aa20.71■□□□□ 0.91
CASC4-209ENST00000559222 C1orf112Q9NSG2 853 aa20.71■□□□□ 0.91
CASC4-209ENST00000559222 INSL6Q9Y581 213 aa20.71■□□□□ 0.91
CASC4-209ENST00000559222 SLC26A4O43511 780 aa20.7■□□□□ 0.9
CASC4-209ENST00000559222 POU5F1BQ06416 359 aa20.7■□□□□ 0.9
CASC4-209ENST00000559222 GPBP1Q86WP2 473 aa20.7■□□□□ 0.9
CASC4-209ENST00000559222 LPPQ93052 612 aa20.7■□□□□ 0.9
CASC4-209ENST00000559222 CCDC113Q9H0I3 377 aa20.7■□□□□ 0.9
CASC4-209ENST00000559222 PCDHA7Q9UN72 937 aa20.7■□□□□ 0.9
CASC4-209ENST00000559222 ZSCAN20P17040 1043 aaPredicted RBP20.69■□□□□ 0.9
CASC4-209ENST00000559222 GUCY2CP25092 1073 aa20.69■□□□□ 0.9
CASC4-209ENST00000559222 NAMPTP43490 491 aa20.69■□□□□ 0.9
CASC4-209ENST00000559222 PEX3P56589 373 aa20.69■□□□□ 0.9
CASC4-209ENST00000559222 ADGRE1Q14246 886 aa20.69■□□□□ 0.9
CASC4-209ENST00000559222 TWF2Q6IBS0 349 aaKnown RBP20.69■□□□□ 0.9
CASC4-209ENST00000559222 ZNF598Q86UK7 904 aaKnown RBP20.69■□□□□ 0.9
CASC4-209ENST00000559222 PDILTQ8N807 584 aa20.69■□□□□ 0.9
CASC4-209ENST00000559222 RNF169Q8NCN4 708 aa20.69■□□□□ 0.9
CASC4-209ENST00000559222 ARNTL2Q8WYA1 636 aa20.69■□□□□ 0.9
CASC4-209ENST00000559222 LARP4BQ92615 738 aaKnown RBP20.69■□□□□ 0.9
CASC4-209ENST00000559222 KIFAP3Q92845 792 aa20.69■□□□□ 0.9
CASC4-209ENST00000559222 REEP2Q9BRK0 252 aa20.69■□□□□ 0.9
CASC4-209ENST00000559222 EIF2AQ9BY44 585 aaKnown RBP20.69■□□□□ 0.9
CASC4-209ENST00000559222 NFKBIZQ9BYH8 718 aa20.69■□□□□ 0.9
CASC4-209ENST00000559222 LRFN2Q9ULH4 789 aa20.69■□□□□ 0.9
CASC4-209ENST00000559222 MYO9BQ13459 2157 aa20.69■□□□□ 0.9
CASC4-209ENST00000559222 CUTAO60888 179 aa20.68■□□□□ 0.9
CASC4-209ENST00000559222 ARF4P18085 180 aaPredicted RBP20.68■□□□□ 0.9
CASC4-209ENST00000559222 LIG1P18858 919 aa20.68■□□□□ 0.9
CASC4-209ENST00000559222 NCLP19338 710 aaKnown RBP20.68■□□□□ 0.9
CASC4-209ENST00000559222 NPTX2P47972 431 aa20.68■□□□□ 0.9
CASC4-209ENST00000559222 CLLU1OSQ5K130 101 aa20.68■□□□□ 0.9
CASC4-209ENST00000559222 TAS1R3Q7RTX0 852 aa20.68■□□□□ 0.9
CASC4-209ENST00000559222 LEO1Q8WVC0 666 aaPredicted RBP20.68■□□□□ 0.9
CASC4-209ENST00000559222 TMEM161AQ9NX61 479 aa20.68■□□□□ 0.9
CASC4-209ENST00000559222 RCOR1Q9UKL0 485 aa20.68■□□□□ 0.9
CASC4-209ENST00000559222 PCDHB7Q9Y5E2 793 aa20.68■□□□□ 0.9
CASC4-209ENST00000559222 MRPL42Q9Y6G3 142 aaKnown RBP20.68■□□□□ 0.9
CASC4-209ENST00000559222 PLXNA4Q9HCM2 1894 aa20.67■□□□□ 0.9
CASC4-209ENST00000559222 A0A0U1RQF3 1178 aa20.67■□□□□ 0.9
CASC4-209ENST00000559222 ERLIN2O94905 339 aa20.67■□□□□ 0.9
CASC4-209ENST00000559222 STAG3L1P0CL83 205 aa20.67■□□□□ 0.9
CASC4-209ENST00000559222 RRAGBQ5VZM2 374 aa20.67■□□□□ 0.9
CASC4-209ENST00000559222 DEPTORQ8TB45 409 aa20.67■□□□□ 0.9
CASC4-209ENST00000559222 KCNG4Q8TDN1 519 aa20.67■□□□□ 0.9
CASC4-209ENST00000559222 GDPD5Q8WTR4 605 aa20.67■□□□□ 0.9
CASC4-209ENST00000559222 FZD8Q9H461 694 aa20.67■□□□□ 0.9
CASC4-209ENST00000559222 GDPD2Q9HCC8 539 aa20.67■□□□□ 0.9
CASC4-209ENST00000559222 CHST12Q9NRB3 414 aa20.67■□□□□ 0.9
CASC4-209ENST00000559222 FAM105AQ9NUU6 356 aa20.67■□□□□ 0.9
CASC4-209ENST00000559222 CCDC169A6NNP5 214 aa20.66■□□□□ 0.9
CASC4-209ENST00000559222 TBKBP1A7MCY6 615 aa20.66■□□□□ 0.9
CASC4-209ENST00000559222 PRKCBP05771 671 aa20.66■□□□□ 0.9
CASC4-209ENST00000559222 ME1P48163 572 aa20.66■□□□□ 0.9
CASC4-209ENST00000559222 ERVK-21P61565 698 aa20.66■□□□□ 0.9
CASC4-209ENST00000559222 GIT2Q14161 759 aa20.66■□□□□ 0.9
CASC4-209ENST00000559222 BTG3Q14201 252 aaPredicted RBP20.66■□□□□ 0.9
CASC4-209ENST00000559222 ATL3Q6DD88 541 aa20.66■□□□□ 0.9
CASC4-209ENST00000559222 ZBTB8OSQ8IWT0 167 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms