RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 PHIPQ8WWQ0 1821 aa12.26□□□□□ -0.45
CLPX-204ENST00000559152 SLC16A4O15374 487 aa12.26□□□□□ -0.45
CLPX-204ENST00000559152 NOP2P46087 812 aaKnown RBP12.26□□□□□ -0.45
CLPX-204ENST00000559152 STXBP2Q15833 593 aa12.26□□□□□ -0.45
CLPX-204ENST00000559152 PRAMEF18Q5VWM3 479 aa12.26□□□□□ -0.45
CLPX-204ENST00000559152 GJB7Q6PEY0 223 aa12.26□□□□□ -0.45
CLPX-204ENST00000559152 MAP4K3Q8IVH8 894 aa12.26□□□□□ -0.45
CLPX-204ENST00000559152 PCIF1Q9H4Z3 704 aa12.26□□□□□ -0.45
CLPX-204ENST00000559152 KMT5AQ9NQR1 393 aa12.26□□□□□ -0.45
CLPX-204ENST00000559152 PFASO15067 1338 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 EMSYQ7Z589 1322 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 SPDYE16A6NNV3 312 aaPredicted RBP12.25□□□□□ -0.45
CLPX-204ENST00000559152 NPTX2P47972 431 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 C2orf54Q08AI8 447 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 CASP8Q14790 479 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 RPS6KA1Q15418 735 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 TERF2Q15554 542 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 PLA2G4FQ68DD2 849 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 TMEM161BQ8NDZ6 487 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 SLC30A5Q8TAD4 765 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 PBKQ96KB5 322 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 CBWD1Q9BRT8 395 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 PACSIN1Q9BY11 444 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 AJAP1Q9UKB5 411 aaPredicted RBP12.25□□□□□ -0.45
CLPX-204ENST00000559152 PARP14Q460N5 1801 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 DDX3XO00571 662 aaKnown RBP eCLIP12.25□□□□□ -0.454e-20■■■■□ 21.5
CLPX-204ENST00000559152 NCK2O43639 380 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 USP2O75604 605 aaPredicted RBP12.25□□□□□ -0.45
CLPX-204ENST00000559152 TNFAIP3P21580 790 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 CXCR5P32302 372 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 ICAM3P32942 547 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 DMTNQ08495 405 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 KIF22Q14807 665 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 XKR3Q5GH77 459 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 SWSAP1Q6NVH7 229 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 CCNI2Q6ZMN8 369 aaPredicted RBP12.25□□□□□ -0.45
CLPX-204ENST00000559152 LMO3Q8TAP4 145 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 IFT74Q96LB3 600 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 SELENOOQ9BVL4 669 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 GPRC5CQ9NQ84 441 aa12.25□□□□□ -0.45
CLPX-204ENST00000559152 A0A0U1RQG5 324 aaPredicted RBP12.24□□□□□ -0.45
CLPX-204ENST00000559152 DENND3A2RUS2 1198 aa12.24□□□□□ -0.45
CLPX-204ENST00000559152 TMEM253P0C7T8 217 aa12.24□□□□□ -0.45
CLPX-204ENST00000559152 CNGA1P29973 690 aa12.24□□□□□ -0.45
CLPX-204ENST00000559152 GTF2H1P32780 548 aa12.24□□□□□ -0.45
CLPX-204ENST00000559152 MXI1P50539 228 aa12.24□□□□□ -0.45
CLPX-204ENST00000559152 ACTR2P61160 394 aa12.24□□□□□ -0.45
CLPX-204ENST00000559152 EPC2Q52LR7 807 aa12.24□□□□□ -0.45
CLPX-204ENST00000559152 HSP90B2PQ58FF3 399 aa12.24□□□□□ -0.45
CLPX-204ENST00000559152 ABHD15Q6UXT9 468 aa12.24□□□□□ -0.45
CLPX-204ENST00000559152 U2AF1L4Q8WU68 220 aaKnown RBP12.24□□□□□ -0.45
CLPX-204ENST00000559152 ATP6V0A4Q9HBG4 840 aa12.24□□□□□ -0.45
CLPX-204ENST00000559152 CSADQ9Y600 493 aa12.24□□□□□ -0.45
CLPX-204ENST00000559152 RGS20O76081 388 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 FTCDO95954 541 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 OAS2P29728 719 aaKnown RBP12.23□□□□□ -0.45
CLPX-204ENST00000559152 HIRAP54198 1017 aaPredicted RBP12.23□□□□□ -0.45
CLPX-204ENST00000559152 SNRNP35Q16560 246 aaKnown RBP12.23□□□□□ -0.45
CLPX-204ENST00000559152 BRDTQ58F21 947 aaPredicted RBP12.23□□□□□ -0.45
CLPX-204ENST00000559152 PHLDB3Q6NSJ2 640 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 ANKRD35Q8N283 1001 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 TMC2Q8TDI7 906 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 CTNNBL1Q8WYA6 563 aaPredicted RBP12.23□□□□□ -0.45
CLPX-204ENST00000559152 FAM81BQ96LP2 452 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 GPR88Q9GZN0 384 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 UBE2TQ9NPD8 197 aaPredicted RBP12.23□□□□□ -0.45
CLPX-204ENST00000559152 MED4Q9NPJ6 270 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 CYP26B1Q9NR63 512 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 ADARB2Q9NS39 739 aaKnown RBP12.23□□□□□ -0.45
CLPX-204ENST00000559152 IGSF9BQ9UPX0 1349 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 MYH11P35749 1972 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 TMEM150BA6NC51 233 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 KIAA0391O15091 583 aaKnown RBP12.23□□□□□ -0.45
CLPX-204ENST00000559152 STBD1O95210 358 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 SUPT20HL2P0C7V6 817 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 GARTP22102 1010 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 DLG4P78352 724 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 PPP3CAQ08209 521 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 KRT39Q6A163 491 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 C8orf74Q6P047 294 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 LBX2Q6XYB7 198 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 SLFN11Q7Z7L1 901 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 LRRC57Q8N9N7 239 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 TPCN2Q8NHX9 752 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 KCNN1Q92952 543 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 DCPSQ96C86 337 aaKnown RBP12.23□□□□□ -0.45
CLPX-204ENST00000559152 PSMB7Q99436 277 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 SH2D3AQ9BRG2 576 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 SYT11Q9BT88 431 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 KIAA1586Q9HCI6 787 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 PRDM10Q9NQV6 1147 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 PDLIM7Q9NR12 457 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 RNF216Q9NWF9 866 aaPredicted RBP12.23□□□□□ -0.45
CLPX-204ENST00000559152 SEPT9Q9UHD8 586 aaPredicted RBP12.23□□□□□ -0.45
CLPX-204ENST00000559152 SSC5DA1L4H1 1573 aa12.23□□□□□ -0.45
CLPX-204ENST00000559152 ZNF862O60290 1169 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 KIF4AO95239 1232 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 TNFRSF8P28908 595 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 GCLMP48507 274 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 GALCP54803 685 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms