RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 MYBPC3Q14896 1274 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 EPHA7Q15375 998 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 CHRNA2Q15822 529 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.15□□□□□ -2.07
USP3-209ENST00000558925 PITRM1Q5JRX3 1037 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 MIIPQ5JXC2 388 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 FAM26FQ5R3K3 315 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 IFIT1BQ5T764 474 aaKnown RBP2.15□□□□□ -2.07
USP3-209ENST00000558925 EFCAB2Q5VUJ9 269 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 PRAMEF18Q5VWM3 479 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 PRAMEF9Q5VWM5 478 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 PCSK4Q6UW60 755 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 LRSAM1Q6UWE0 723 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 KSR2Q6VAB6 950 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 TTLL7Q6ZT98 887 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 FRMD7Q6ZUT3 714 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 KCNK18Q7Z418 384 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 STK32CQ86UX6 486 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 CABP7Q86V35 215 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 PROSER1Q86XN7 944 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 AMOTL1Q8IY63 956 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 NLGN4XQ8N0W4 816 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 PPM1NQ8N819 430 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 C7orf31Q8N865 590 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 HIPK4Q8NE63 616 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 Q8TCH9 128 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 TSPEARQ8WU66 669 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 CPA5Q8WXQ8 436 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 SEC14L1Q92503 715 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 CLIP3Q96DZ5 547 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 HSPBAP1Q96EW2 488 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 ZNF503Q96F45 646 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 TSPAN17Q96FV3 270 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 SLC39A13Q96H72 371 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 CAMKK2Q96RR4 588 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 ORAI2Q96SN7 254 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 AMNQ9BXJ7 453 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 AP5M1Q9H0R1 490 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 SLC12A5Q9H2X9 1139 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 DEF6Q9H4E7 631 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 ARNT2Q9HBZ2 717 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 TCF7L1Q9HCS4 588 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 SLC39A2Q9NP94 309 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 UCKL1Q9NWZ5 548 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 DNAJC28Q9NX36 388 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 BTBD7Q9P203 1132 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 TMPRSS11EQ9UL52 423 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 GIT1Q9Y2X7 761 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 SPEF1Q9Y4P9 236 aa2.15□□□□□ -2.07
USP3-209ENST00000558925 UBA6A0AVT1 1052 aaPredicted RBP2.14□□□□□ -2.07
USP3-209ENST00000558925 KLHL33A6NCF5 533 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 NPEPPSL1A6NEC2 478 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 KRTAP29-1A8MX34 341 aaPredicted RBP2.14□□□□□ -2.07
USP3-209ENST00000558925 APAF1O14727 1248 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 PLSCR1O15162 318 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 TPD52L2O43399 206 aaKnown RBP2.14□□□□□ -2.07
USP3-209ENST00000558925 MAFKO60675 156 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 NDUFS2O75306 463 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 CFBP00751 764 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 LRG1P02750 347 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 PFKMP08237 780 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 FNTBP49356 437 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 ATXN1P54253 815 aaKnown RBP2.14□□□□□ -2.07
USP3-209ENST00000558925 LGALS4P56470 323 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 DGCR2P98153 550 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 SLC6A3Q01959 620 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 KIF23Q02241 960 aaPredicted RBP2.14□□□□□ -2.07
USP3-209ENST00000558925 DPTQ07507 201 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 FAPQ12884 760 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 NOLC1Q14978 699 aaKnown RBP eCLIP2.14□□□□□ -2.07
USP3-209ENST00000558925 FSCN1Q16658 493 aaKnown RBP2.14□□□□□ -2.07
USP3-209ENST00000558925 UGT8Q16880 541 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 CR1LQ2VPA4 569 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 GFOD2Q3B7J2 385 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 RRP12Q5JTH9 1297 aaKnown RBP2.14□□□□□ -2.07
USP3-209ENST00000558925 TTC38Q5R3I4 469 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 CD276Q5ZPR3 534 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 IL31Q6EBC2 164 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 CXorf57Q6NSI4 855 aaKnown RBP2.14□□□□□ -2.07
USP3-209ENST00000558925 CYP4F22Q6NT55 531 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 BORAQ6PGQ7 559 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 B3GNT9Q6UX72 402 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 TMC5Q6UXY8 1006 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 GLCCI1Q86VQ1 547 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 CIR1Q86X95 450 aaPredicted RBP2.14□□□□□ -2.07
USP3-209ENST00000558925 COL23A1Q86Y22 540 aaPredicted RBP2.14□□□□□ -2.07
USP3-209ENST00000558925 LYSMD2Q8IV50 215 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 DNAJC10Q8IXB1 793 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 ZZZ3Q8IYH5 903 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 PPP1R35Q8TAP8 253 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 PHOSPHO1Q8TCT1 267 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 FERMT2Q96AC1 680 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 RUNDC1Q96C34 613 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 PEX11GQ96HA9 241 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 ACAP3Q96P50 834 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 TUBGCP5Q96RT8 1024 aa2.14□□□□□ -2.07
USP3-209ENST00000558925 MPHOSPH6Q99547 160 aaKnown RBP2.14□□□□□ -2.07
USP3-209ENST00000558925 C11orf84Q9BUA3 381 aaPredicted RBP2.14□□□□□ -2.07
USP3-209ENST00000558925 GTPBP4Q9BZE4 634 aaKnown RBP2.14□□□□□ -2.07
USP3-209ENST00000558925 MEGF9Q9H1U4 602 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms