RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 C2CD6Q53TS8 623 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 METTL13Q8N6R0 699 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 DCAF4Q8WV16 495 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 SAAL1Q96ER3 474 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 SAMD15Q9P1V8 674 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 CPSF2Q9P2I0 782 aaKnown RBP13.1□□□□□ -0.31
SEC11A-206ENST00000558924 NHSL1Q5SYE7 1610 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 CASZ1Q86V15 1759 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 IPO5O00410 1097 aaKnown RBP13.1□□□□□ -0.31
SEC11A-206ENST00000558924 NEFHP12036 1026 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 KRT5P13647 590 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 PEX3P56589 373 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 TMEM119Q4V9L6 283 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 XKR9Q5GH70 373 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 KIAA1755Q5JYT7 1200 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 RUFY4Q6ZNE9 571 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 ZNF571Q7Z3V5 609 aaPredicted RBP13.1□□□□□ -0.31
SEC11A-206ENST00000558924 LDHDQ86WU2 507 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 BAP1Q92560 729 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 LRRC4CQ9HCJ2 640 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 UBE2TQ9NPD8 197 aaPredicted RBP13.1□□□□□ -0.31
SEC11A-206ENST00000558924 GRID2IPA4D2P6 1211 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 ZBTB7AO95365 584 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 SCTRP47872 440 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 USP11P51784 963 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 PLA2G4FQ68DD2 849 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 DEFB132Q7Z7B7 95 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 ROBO3Q96MS0 1386 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 WDR11Q9BZH6 1224 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 AZI2Q9H6S1 392 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 DNAJC12Q9UKB3 198 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 AMFRQ9UKV5 643 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 NFIBO00712 420 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 SLC16A4O15374 487 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 MMEP08473 750 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 SKOR1P84550 965 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 TMEM132AQ24JP5 1023 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 EPC2Q52LR7 807 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 RINT1Q6NUQ1 792 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 EEPD1Q7L9B9 569 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 CHURC1Q8WUH1 139 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 CNKSR1Q969H4 720 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 HVCN1Q96D96 273 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 NEUROG2Q9H2A3 272 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 SPATS2LQ9NUQ6 558 aaKnown RBP13.09□□□□□ -0.31
SEC11A-206ENST00000558924 NYAP2Q9P242 653 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 SMCHD1A6NHR9 2005 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 SPOPO43791 374 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 IRX1P78414 480 aaPredicted RBP13.09□□□□□ -0.31
SEC11A-206ENST00000558924 DRAP1Q14919 205 aaPredicted RBP13.09□□□□□ -0.31
SEC11A-206ENST00000558924 DENND2CQ68D51 928 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 SIAH1Q8IUQ4 282 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 ANKS4BQ8N8V4 417 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 FMO2Q99518 471 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 NOD2Q9HC29 1040 aa13.09□□□□□ -0.31
SEC11A-206ENST00000558924 INTS9Q9NV88 658 aaKnown RBP13.09□□□□□ -0.31
SEC11A-206ENST00000558924 FOSP01100 380 aaPredicted RBP13.08□□□□□ -0.31
SEC11A-206ENST00000558924 SPATA31C1P0DKV0 1188 aa13.08□□□□□ -0.31
SEC11A-206ENST00000558924 RPA1P27694 616 aa13.08□□□□□ -0.31
SEC11A-206ENST00000558924 SLC18A3Q16572 532 aa13.08□□□□□ -0.31
SEC11A-206ENST00000558924 FAM47EQ6ZV65 393 aa13.08□□□□□ -0.31
SEC11A-206ENST00000558924 USP38Q8NB14 1042 aa13.08□□□□□ -0.31
SEC11A-206ENST00000558924 RAPGEF5Q92565 580 aa13.08□□□□□ -0.31
SEC11A-206ENST00000558924 PRCCQ92733 491 aaPredicted RBP13.08□□□□□ -0.31
SEC11A-206ENST00000558924 TATDN2Q93075 761 aa13.08□□□□□ -0.31
SEC11A-206ENST00000558924 SEC16BQ96JE7 1060 aa13.08□□□□□ -0.31
SEC11A-206ENST00000558924 NR2E1Q9Y466 385 aa13.08□□□□□ -0.31
SEC11A-206ENST00000558924 GNA14O95837 355 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 GNPTABQ3T906 1256 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 ANKRD20A8PQ5CZ79 823 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 TRIM59Q8IWR1 403 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 CEP120Q8N960 986 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 JDP2Q8WYK2 163 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 AKT1S1Q96B36 256 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 WDR18Q9BV38 432 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 GLT8D2Q9H1C3 349 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 NOL4O94818 638 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 SNHG28P0DPA3 235 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 PON1P27169 355 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 SESN3P58005 492 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 CEP55Q53EZ4 464 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 SEPT14Q6ZU15 432 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 PRMT1Q99873 361 aaKnown RBP13.08□□□□□ -0.32
SEC11A-206ENST00000558924 TEKT3Q9BXF9 490 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 ASIC3Q9UHC3 531 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 CCDC88AQ3V6T2 1871 aa13.08□□□□□ -0.32
SEC11A-206ENST00000558924 A0A1B0GUL6 1792 aa13.07□□□□□ -0.32
SEC11A-206ENST00000558924 KLHL33A6NCF5 533 aa13.07□□□□□ -0.32
SEC11A-206ENST00000558924 HIP1RO75146 1068 aa13.07□□□□□ -0.32
SEC11A-206ENST00000558924 ANP32DO95626 131 aa13.07□□□□□ -0.32
SEC11A-206ENST00000558924 PSMC2P35998 433 aaKnown RBP13.07□□□□□ -0.32
SEC11A-206ENST00000558924 SLC12A3P55017 1021 aa13.07□□□□□ -0.32
SEC11A-206ENST00000558924 PPP2R2AP63151 447 aa13.07□□□□□ -0.32
SEC11A-206ENST00000558924 BZW1Q7L1Q6 419 aaKnown RBP13.07□□□□□ -0.32
SEC11A-206ENST00000558924 SPIRE2Q8WWL2 714 aa13.07□□□□□ -0.32
SEC11A-206ENST00000558924 BTBD6Q96KE9 485 aa13.07□□□□□ -0.32
SEC11A-206ENST00000558924 PICK1Q9NRD5 415 aa13.07□□□□□ -0.32
SEC11A-206ENST00000558924 STK32BQ9NY57 414 aa13.07□□□□□ -0.32
SEC11A-206ENST00000558924 HMGB1P1B2RPK0 211 aaPredicted RBP13.07□□□□□ -0.32
SEC11A-206ENST00000558924 RBAK-RBAKDNI3L0D1 243 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms