RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 CDCA2Q69YH5 1023 aaPredicted RBP19.27■□□□□ 0.68
TPM1-214ENST00000558544 IFNLR1Q8IU57 520 aaPredicted RBP19.27■□□□□ 0.68
TPM1-214ENST00000558544 ZBTB8OSQ8IWT0 167 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 FMR1NBQ8N0W7 255 aaPredicted RBP19.27■□□□□ 0.68
TPM1-214ENST00000558544 NFKBIZQ9BYH8 718 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 TRIM9Q9C026 710 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 LRRC27Q9C0I9 530 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 BLZF1Q9H2G9 400 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 C17orf75Q9HAS0 396 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 PARVGQ9HBI0 331 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 KMT5AQ9NQR1 393 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 ZBBXA8MT70 800 aa19.26■□□□□ 0.67
TPM1-214ENST00000558544 IDEP14735 1019 aa19.26■□□□□ 0.67
TPM1-214ENST00000558544 ZNF131P52739 623 aa19.26■□□□□ 0.67
TPM1-214ENST00000558544 SNW1Q13573 536 aaKnown RBP19.26■□□□□ 0.67
TPM1-214ENST00000558544 IKBKEQ14164 716 aa19.26■□□□□ 0.67
TPM1-214ENST00000558544 SHHQ15465 462 aa19.26■□□□□ 0.67
TPM1-214ENST00000558544 ODR4Q5SWX8 454 aa19.26■□□□□ 0.67
TPM1-214ENST00000558544 KRBA2Q6ZNG9 492 aa19.26■□□□□ 0.67
TPM1-214ENST00000558544 CATSPER4Q7RTX7 472 aa19.26■□□□□ 0.67
TPM1-214ENST00000558544 MYCT1Q8N699 235 aa19.26■□□□□ 0.67
TPM1-214ENST00000558544 CNNM3Q8NE01 707 aa19.26■□□□□ 0.67
TPM1-214ENST00000558544 ENGASEQ8NFI3 743 aa19.26■□□□□ 0.67
TPM1-214ENST00000558544 PAGE5Q96GU1 130 aa19.26■□□□□ 0.67
TPM1-214ENST00000558544 C2orf40Q9H1Z8 148 aa19.26■□□□□ 0.67
TPM1-214ENST00000558544 TMX1Q9H3N1 280 aa19.26■□□□□ 0.67
TPM1-214ENST00000558544 LARSQ9P2J5 1176 aaKnown RBP19.26■□□□□ 0.67
TPM1-214ENST00000558544 SLC16A4O15374 487 aa19.25■□□□□ 0.67
TPM1-214ENST00000558544 NR1I2O75469 434 aa19.25■□□□□ 0.67
TPM1-214ENST00000558544 ASIC1P78348 528 aa19.25■□□□□ 0.67
TPM1-214ENST00000558544 CUL4BQ13620 913 aa19.25■□□□□ 0.67
TPM1-214ENST00000558544 HERVK_113Q902F9 699 aa19.25■□□□□ 0.67
TPM1-214ENST00000558544 RNPC3Q96LT9 517 aaKnown RBP19.25■□□□□ 0.67
TPM1-214ENST00000558544 C7orf25Q9BPX7 421 aa19.25■□□□□ 0.67
TPM1-214ENST00000558544 PRO3102Q9H379 93 aa19.25■□□□□ 0.67
TPM1-214ENST00000558544 CXXC1Q9P0U4 656 aaPredicted RBP19.25■□□□□ 0.67
TPM1-214ENST00000558544 BAIAP3O94812 1187 aa19.24■□□□□ 0.67
TPM1-214ENST00000558544 ERLIN2O94905 339 aa19.24■□□□□ 0.67
TPM1-214ENST00000558544 SMTNP53814 917 aa19.24■□□□□ 0.67
TPM1-214ENST00000558544 SFR1Q86XK3 245 aa19.24■□□□□ 0.67
TPM1-214ENST00000558544 SPIRE2Q8WWL2 714 aa19.24■□□□□ 0.67
TPM1-214ENST00000558544 LINC01599Q8WXQ3 324 aa19.24■□□□□ 0.67
TPM1-214ENST00000558544 FTHL17Q9BXU8 183 aa19.24■□□□□ 0.67
TPM1-214ENST00000558544 CCDC113Q9H0I3 377 aa19.24■□□□□ 0.67
TPM1-214ENST00000558544 PANK4Q9NVE7 773 aa19.24■□□□□ 0.67
TPM1-214ENST00000558544 TTC3P53804 2025 aa19.24■□□□□ 0.67
TPM1-214ENST00000558544 ABHD14A-ACY1A0A1B0GW23 586 aa19.23■□□□□ 0.67
TPM1-214ENST00000558544 FRMD3A2A2Y4 597 aa19.23■□□□□ 0.67
TPM1-214ENST00000558544 K7ENM7 598 aa19.23■□□□□ 0.67
TPM1-214ENST00000558544 TRAK2O60296 914 aa19.23■□□□□ 0.67
TPM1-214ENST00000558544 MGEA5O60502 916 aa19.23■□□□□ 0.67
TPM1-214ENST00000558544 PRKCBP05771 671 aa19.23■□□□□ 0.67
TPM1-214ENST00000558544 PRR29P0C7W0 189 aa19.23■□□□□ 0.67
TPM1-214ENST00000558544 GAP43P17677 238 aa19.23■□□□□ 0.67
TPM1-214ENST00000558544 NCKAP1LP55160 1127 aa19.23■□□□□ 0.67
TPM1-214ENST00000558544 WDR5P61964 334 aaKnown RBP19.23■□□□□ 0.67
TPM1-214ENST00000558544 FAM178BQ8IXR5 827 aa19.23■□□□□ 0.67
TPM1-214ENST00000558544 CCDC65Q8IXS2 484 aa19.23■□□□□ 0.67
TPM1-214ENST00000558544 TDHQ8IZJ6 230 aa19.23■□□□□ 0.67
TPM1-214ENST00000558544 MTIF3Q9H2K0 278 aaKnown RBP19.23■□□□□ 0.67
TPM1-214ENST00000558544 ARHGAP28Q9P2N2 729 aa19.23■□□□□ 0.67
TPM1-214ENST00000558544 PIN4Q9Y237 131 aaKnown RBP19.23■□□□□ 0.67
TPM1-214ENST00000558544 PHLPP2Q6ZVD8 1323 aa19.23■□□□□ 0.67
TPM1-214ENST00000558544 DENND3A2RUS2 1198 aa19.22■□□□□ 0.67
TPM1-214ENST00000558544 TSPAN1O60635 241 aa19.22■□□□□ 0.67
TPM1-214ENST00000558544 EDN1P05305 212 aa19.22■□□□□ 0.67
TPM1-214ENST00000558544 KCNJ6P48051 423 aa19.22■□□□□ 0.67
TPM1-214ENST00000558544 EFNA5P52803 228 aa19.22■□□□□ 0.67
TPM1-214ENST00000558544 COASYQ13057 564 aa19.22■□□□□ 0.67
TPM1-214ENST00000558544 MAPK6Q16659 721 aa19.22■□□□□ 0.67
TPM1-214ENST00000558544 AMHR2Q16671 573 aa19.22■□□□□ 0.67
TPM1-214ENST00000558544 CNNM4Q6P4Q7 775 aa19.22■□□□□ 0.67
TPM1-214ENST00000558544 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.22■□□□□ 0.67
TPM1-214ENST00000558544 TMEM161BQ8NDZ6 487 aa19.22■□□□□ 0.67
TPM1-214ENST00000558544 CPB2Q96IY4 423 aa19.22■□□□□ 0.67
TPM1-214ENST00000558544 FIZ1Q96SL8 496 aa19.22■□□□□ 0.67
TPM1-214ENST00000558544 NTPCRQ9BSD7 190 aaKnown RBP19.22■□□□□ 0.67
TPM1-214ENST00000558544 LMBRD1Q9NUN5 540 aa19.22■□□□□ 0.67
TPM1-214ENST00000558544 AGPAT5Q9NUQ2 364 aa19.22■□□□□ 0.67
TPM1-214ENST00000558544 PRMT7Q9NVM4 692 aaPredicted RBP19.22■□□□□ 0.67
TPM1-214ENST00000558544 TBC1D7Q9P0N9 293 aa19.22■□□□□ 0.67
TPM1-214ENST00000558544 COLQQ9Y215 455 aaPredicted RBP19.22■□□□□ 0.67
TPM1-214ENST00000558544 LAMA3Q16787 3333 aa19.22■□□□□ 0.67
TPM1-214ENST00000558544 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.21■□□□□ 0.67
TPM1-214ENST00000558544 GOLGA6L22H0YM25 854 aa19.21■□□□□ 0.67
TPM1-214ENST00000558544 B4GALT5O43286 388 aa19.21■□□□□ 0.67
TPM1-214ENST00000558544 GTPBP6O43824 516 aaPredicted RBP19.21■□□□□ 0.67
TPM1-214ENST00000558544 KINO60870 393 aaKnown RBP19.21■□□□□ 0.67
TPM1-214ENST00000558544 EFCAB14O75071 495 aa19.21■□□□□ 0.67
TPM1-214ENST00000558544 ZSCAN20P17040 1043 aaPredicted RBP19.21■□□□□ 0.67
TPM1-214ENST00000558544 NMT1P30419 496 aaKnown RBP19.21■□□□□ 0.67
TPM1-214ENST00000558544 DEFB103AP81534 67 aa19.21■□□□□ 0.67
TPM1-214ENST00000558544 DSC3Q14574 896 aa19.21■□□□□ 0.67
TPM1-214ENST00000558544 PCBP1Q15365 356 aaKnown RBP eCLIP19.21■□□□□ 0.67
TPM1-214ENST00000558544 HERC4Q5GLZ8 1057 aaPredicted RBP19.21■□□□□ 0.67
TPM1-214ENST00000558544 RASIP1Q5U651 963 aa19.21■□□□□ 0.67
TPM1-214ENST00000558544 PPP4R3CPQ6ZMV5 832 aa19.21■□□□□ 0.67
TPM1-214ENST00000558544 UNC13DQ70J99 1090 aa19.21■□□□□ 0.67
TPM1-214ENST00000558544 TAS1R3Q7RTX0 852 aa19.21■□□□□ 0.67
TPM1-214ENST00000558544 RTN4RL1Q86UN2 441 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms