RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 RRAGBQ5VZM2 374 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 TWF2Q6IBS0 349 aaKnown RBP13.67□□□□□ -0.22
SMAD3-205ENST00000558428 GPBP1Q86WP2 473 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 ZBTB8OSQ8IWT0 167 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 DEPTORQ8TB45 409 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 LARP4BQ92615 738 aaKnown RBP13.67□□□□□ -0.22
SMAD3-205ENST00000558428 CHAMP1Q96JM3 812 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 DRC1Q96MC2 740 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 TIPINQ9BVW5 301 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 NFKBIZQ9BYH8 718 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 C2orf40Q9H1Z8 148 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 SEMA6BQ9H3T3 888 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 CHST12Q9NRB3 414 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 AGPAT5Q9NUQ2 364 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-205ENST00000558428 DACT1Q9NYF0 836 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 KCND2Q9NZV8 630 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 STK17AQ9UEE5 414 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 PCDHB7Q9Y5E2 793 aa13.67□□□□□ -0.22
SMAD3-205ENST00000558428 FNDC1Q4ZHG4 1894 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-205ENST00000558428 ARHGEF15O94989 841 aa13.66□□□□□ -0.22
SMAD3-205ENST00000558428 DDIT3P35638 169 aa13.66□□□□□ -0.22
SMAD3-205ENST00000558428 MBTD1Q05BQ5 628 aa13.66□□□□□ -0.22
SMAD3-205ENST00000558428 MAPK7Q13164 816 aa13.66□□□□□ -0.22
SMAD3-205ENST00000558428 PCBP1Q15365 356 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMAD3-205ENST00000558428 CDCA2Q69YH5 1023 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-205ENST00000558428 CCDC73Q6ZRK6 1079 aa13.66□□□□□ -0.22
SMAD3-205ENST00000558428 DAW1Q8N136 415 aa13.66□□□□□ -0.22
SMAD3-205ENST00000558428 SPATA32Q96LK8 384 aa13.66□□□□□ -0.22
SMAD3-205ENST00000558428 PANK2Q9BZ23 570 aa13.66□□□□□ -0.22
SMAD3-205ENST00000558428 RCOR1Q9UKL0 485 aa13.66□□□□□ -0.22
SMAD3-205ENST00000558428 PCDHA7Q9UN72 937 aa13.66□□□□□ -0.22
SMAD3-205ENST00000558428 NLRC5Q86WI3 1866 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 A0A087X0B3 334 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 NPHP3-ACAD11A0A0J9YXS1 232 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 CCDC169A6NNP5 214 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 SFI1A8K8P3 1242 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 TSPAN1O60635 241 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 DGKIO75912 1065 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 KRT18P05783 430 aaKnown RBP13.65□□□□□ -0.22
SMAD3-205ENST00000558428 LIG1P18858 919 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 HOXA11P31270 313 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-205ENST00000558428 STAT6P42226 847 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 PEX3P56589 373 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 FAM189BP81408 668 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 CACNB1Q02641 598 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-205ENST00000558428 TAP1Q03518 808 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 NCBP1Q09161 790 aaKnown RBP13.65□□□□□ -0.22
SMAD3-205ENST00000558428 DMP1Q13316 513 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-205ENST00000558428 ARSHQ5FYA8 562 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 AXDND1Q5T1B0 1012 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-205ENST00000558428 SHC4Q6S5L8 630 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 ECHDC2Q86YB7 292 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 CRIPAKQ8N1N5 446 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 PDILTQ8N807 584 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 RNF169Q8NCN4 708 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 SP7Q8TDD2 431 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-205ENST00000558428 LEO1Q8WVC0 666 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-205ENST00000558428 KIFC3Q9BVG8 833 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 ELAC1Q9H777 363 aaKnown RBP13.65□□□□□ -0.22
SMAD3-205ENST00000558428 PRMT7Q9NVM4 692 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-205ENST00000558428 TMEM161AQ9NX61 479 aa13.65□□□□□ -0.22
SMAD3-205ENST00000558428 ADGRA3Q8IWK6 1321 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 A0A0U1RQF3 1178 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 LINC01553A4QN01 128 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 B4GALT5O43286 388 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 PRKCBP05771 671 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 AXLP30530 894 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 NPTX2P47972 431 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 GATMP50440 423 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 RAB27AP51159 221 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 GRIN2CQ14957 1233 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 MAPK6Q16659 721 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 AMHR2Q16671 573 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 NAALADL2Q58DX5 795 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 NOTUMQ6P988 496 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 PPP4R3CPQ6ZMV5 832 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 SV2BQ7L1I2 683 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 ZNF689Q96CS4 500 aaPredicted RBP13.64□□□□□ -0.23
SMAD3-205ENST00000558428 CPB2Q96IY4 423 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 PRIMPOLQ96LW4 560 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 REEP2Q9BRK0 252 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 CERS4Q9HA82 394 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 C17orf75Q9HAS0 396 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 RC3H2Q9HBD1 1191 aaKnown RBP13.64□□□□□ -0.23
SMAD3-205ENST00000558428 KMT5AQ9NQR1 393 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 FAM105AQ9NUU6 356 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 MTMR10Q9NXD2 777 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 ODF2LQ9ULJ1 636 aa13.64□□□□□ -0.23
SMAD3-205ENST00000558428 COL4A6Q14031 1691 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 TBKBP1A7MCY6 615 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 EOMESO95936 686 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 FGFR1P11362 822 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 SKIP12755 728 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 PLS3P13797 630 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 ARF4P18085 180 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-205ENST00000558428 EFNA5P52803 228 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 BTG3Q14201 252 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-205ENST00000558428 FAM187BQ17R55 369 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 TMEM132AQ24JP5 1023 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms