RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 ATXN2LQ8WWM7 1075 aaKnown RBP11.43□□□□□ -0.58
TPM1-212ENST00000558347 HAS1Q92839 578 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 CEP89Q96ST8 783 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 SH2D3AQ9BRG2 576 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 LMCD1Q9NZU5 365 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 FBXO2Q9UK22 296 aaPredicted RBP11.43□□□□□ -0.58
TPM1-212ENST00000558347 ST3GAL5Q9UNP4 418 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 PAXBP1Q9Y5B6 917 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 KIAA1671Q9BY89 1806 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 DGKIO75912 1065 aa11.42□□□□□ -0.58
TPM1-212ENST00000558347 PRPHP41219 470 aa11.42□□□□□ -0.58
TPM1-212ENST00000558347 NDUFA8P51970 172 aa11.42□□□□□ -0.58
TPM1-212ENST00000558347 CRYBB1P53674 252 aaPredicted RBP11.42□□□□□ -0.58
TPM1-212ENST00000558347 NLRP12P59046 1061 aa11.42□□□□□ -0.58
TPM1-212ENST00000558347 PTGDRQ13258 359 aa11.42□□□□□ -0.58
TPM1-212ENST00000558347 PPP2R5CQ13362 524 aa11.42□□□□□ -0.58
TPM1-212ENST00000558347 TARBP2Q15633 366 aaKnown RBP11.42□□□□□ -0.58
TPM1-212ENST00000558347 MTERF2Q49AM1 385 aa11.42□□□□□ -0.58
TPM1-212ENST00000558347 FAM228AQ86W67 206 aa11.42□□□□□ -0.58
TPM1-212ENST00000558347 LRRC8AQ8IWT6 810 aa11.42□□□□□ -0.58
TPM1-212ENST00000558347 ELOA2Q8IYF1 753 aaPredicted RBP11.42□□□□□ -0.58
TPM1-212ENST00000558347 ZNF668Q96K58 619 aaPredicted RBP11.42□□□□□ -0.58
TPM1-212ENST00000558347 SAMD11Q96NU1 681 aa11.42□□□□□ -0.58
TPM1-212ENST00000558347 ASB2Q96Q27 587 aa11.42□□□□□ -0.58
TPM1-212ENST00000558347 ADAMTS10Q9H324 1103 aa11.42□□□□□ -0.58
TPM1-212ENST00000558347 SEPT9Q9UHD8 586 aaPredicted RBP11.42□□□□□ -0.58
TPM1-212ENST00000558347 AKT3Q9Y243 479 aa11.42□□□□□ -0.58
TPM1-212ENST00000558347 ATG2AQ2TAZ0 1938 aa11.42□□□□□ -0.58
TPM1-212ENST00000558347 H3BNC9 293 aa11.41□□□□□ -0.58
TPM1-212ENST00000558347 TBX3O15119 743 aa11.41□□□□□ -0.58
TPM1-212ENST00000558347 PRKCSHP14314 528 aaPredicted RBP11.41□□□□□ -0.58
TPM1-212ENST00000558347 IBSPP21815 317 aaPredicted RBP11.41□□□□□ -0.58
TPM1-212ENST00000558347 TMOD1P28289 359 aa11.41□□□□□ -0.58
TPM1-212ENST00000558347 MARCKSP29966 332 aaPredicted RBP11.41□□□□□ -0.58
TPM1-212ENST00000558347 MCM7P33993 719 aa11.41□□□□□ -0.58
TPM1-212ENST00000558347 GATMP50440 423 aa11.41□□□□□ -0.58
TPM1-212ENST00000558347 NLRP11P59045 1033 aaKnown RBP11.41□□□□□ -0.58
TPM1-212ENST00000558347 TBC1D8BQ0IIM8 1120 aa11.41□□□□□ -0.58
TPM1-212ENST00000558347 DRP2Q13474 957 aa11.41□□□□□ -0.58
TPM1-212ENST00000558347 BTG3Q14201 252 aaPredicted RBP11.41□□□□□ -0.58
TPM1-212ENST00000558347 XKR3Q5GH77 459 aa11.41□□□□□ -0.58
TPM1-212ENST00000558347 ANO5Q75V66 913 aa11.41□□□□□ -0.58
TPM1-212ENST00000558347 NPAS4Q8IUM7 802 aa11.41□□□□□ -0.58
TPM1-212ENST00000558347 CACTINQ8WUQ7 758 aaKnown RBP11.41□□□□□ -0.58
TPM1-212ENST00000558347 CLP1Q92989 425 aaKnown RBP11.41□□□□□ -0.58
TPM1-212ENST00000558347 FAM20AQ96MK3 541 aa11.41□□□□□ -0.58
TPM1-212ENST00000558347 NIFKQ9BYG3 293 aaKnown RBP11.41□□□□□ -0.58
TPM1-212ENST00000558347 WRAP73Q9P2S5 460 aaPredicted RBP11.41□□□□□ -0.58
TPM1-212ENST00000558347 IGKV6-21A0A0C4DH24 114 aa11.4□□□□□ -0.58
TPM1-212ENST00000558347 A0A1B0GVL5 298 aa11.4□□□□□ -0.58
TPM1-212ENST00000558347 KIF2AO00139 706 aaPredicted RBP11.4□□□□□ -0.58
TPM1-212ENST00000558347 RIOK3O14730 519 aaKnown RBP11.4□□□□□ -0.58
TPM1-212ENST00000558347 IKBKBO14920 756 aa11.4□□□□□ -0.58
TPM1-212ENST00000558347 GPR182O15218 404 aa11.4□□□□□ -0.58
TPM1-212ENST00000558347 CTNNB1P35222 781 aa11.4□□□□□ -0.58
TPM1-212ENST00000558347 SARSP49591 514 aaKnown RBP11.4□□□□□ -0.58
TPM1-212ENST00000558347 GPC3P51654 580 aa11.4□□□□□ -0.58
TPM1-212ENST00000558347 PSMC5P62195 406 aa11.4□□□□□ -0.58
TPM1-212ENST00000558347 MRPS5P82675 430 aaKnown RBP11.4□□□□□ -0.58
TPM1-212ENST00000558347 SPIRE1Q08AE8 756 aa11.4□□□□□ -0.58
TPM1-212ENST00000558347 LRMPQ12912 555 aa11.4□□□□□ -0.58
TPM1-212ENST00000558347 GPM6BQ13491 265 aa11.4□□□□□ -0.58
TPM1-212ENST00000558347 PAN2Q504Q3 1202 aaKnown RBP11.4□□□□□ -0.58
TPM1-212ENST00000558347 RESP18Q5W5W9 173 aa11.4□□□□□ -0.58
TPM1-212ENST00000558347 PLA2G4FQ68DD2 849 aa11.4□□□□□ -0.58
TPM1-212ENST00000558347 AOPEPQ8N6M6 819 aa11.4□□□□□ -0.58
TPM1-212ENST00000558347 CCDC150Q8NCX0 1101 aa11.4□□□□□ -0.58
TPM1-212ENST00000558347 ADAM2Q99965 735 aa11.4□□□□□ -0.58
TPM1-212ENST00000558347 RGS18Q9NS28 235 aa11.4□□□□□ -0.58
TPM1-212ENST00000558347 FNDC1Q4ZHG4 1894 aaPredicted RBP11.4□□□□□ -0.58
TPM1-212ENST00000558347 DENND3A2RUS2 1198 aa11.4□□□□□ -0.59
TPM1-212ENST00000558347 C9IYK1 514 aa11.4□□□□□ -0.59
TPM1-212ENST00000558347 C5orf67F2Z3F1 127 aa11.4□□□□□ -0.59
TPM1-212ENST00000558347 ZNF202O95125 648 aa11.4□□□□□ -0.59
TPM1-212ENST00000558347 OR52Z1P0C646 297 aa11.4□□□□□ -0.59
TPM1-212ENST00000558347 BMPR1AP36894 532 aa11.4□□□□□ -0.59
TPM1-212ENST00000558347 QARSP47897 775 aaKnown RBP11.4□□□□□ -0.59
TPM1-212ENST00000558347 KCNQ1P51787 676 aa11.4□□□□□ -0.59
TPM1-212ENST00000558347 DSC3Q14574 896 aa11.4□□□□□ -0.59
TPM1-212ENST00000558347 NCAPH2Q6IBW4 605 aa11.4□□□□□ -0.59
TPM1-212ENST00000558347 SHC4Q6S5L8 630 aa11.4□□□□□ -0.59
TPM1-212ENST00000558347 CMTR2Q8IYT2 770 aaKnown RBP11.4□□□□□ -0.59
TPM1-212ENST00000558347 ANKRD7Q92527 254 aa11.4□□□□□ -0.59
TPM1-212ENST00000558347 SYMPKQ92797 1274 aaKnown RBP11.4□□□□□ -0.59
TPM1-212ENST00000558347 MRPL38Q96DV4 380 aaKnown RBP11.4□□□□□ -0.59
TPM1-212ENST00000558347 CLIC6Q96NY7 704 aa11.4□□□□□ -0.59
TPM1-212ENST00000558347 MTMR9Q96QG7 549 aa11.4□□□□□ -0.59
TPM1-212ENST00000558347 CCDC94Q9BW85 323 aaPredicted RBP11.4□□□□□ -0.59
TPM1-212ENST00000558347 TMEM60Q9H2L4 133 aa11.4□□□□□ -0.59
TPM1-212ENST00000558347 HPSEQ9Y251 543 aa11.4□□□□□ -0.59
TPM1-212ENST00000558347 MRPL42Q9Y6G3 142 aaKnown RBP11.4□□□□□ -0.59
TPM1-212ENST00000558347 TCF20Q9UGU0 1960 aaKnown RBP11.39□□□□□ -0.59
TPM1-212ENST00000558347 MARCH6O60337 910 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 MAFO75444 373 aaPredicted RBP11.39□□□□□ -0.59
TPM1-212ENST00000558347 CSDE1O75534 798 aaKnown RBP11.39□□□□□ -0.59
TPM1-212ENST00000558347 TUBB4AP04350 444 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 P4HBP07237 508 aaKnown RBP11.39□□□□□ -0.59
TPM1-212ENST00000558347 STAG3L1P0CL83 205 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 TNNT1P13805 278 aa11.39□□□□□ -0.59
TPM1-212ENST00000558347 PFKFB1P16118 471 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms