RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CAPN14A8MX76 684 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 GPR15P49685 360 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 MGAT5Q09328 741 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 FOXL1Q12952 345 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 DUSP8Q13202 625 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 SAFB2Q14151 953 aaKnown RBP eCLIP4.7□□□□□ -1.66
SPG11-206ENST00000558093 SPIDRQ14159 915 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 STAT4Q14765 748 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 ZXDCQ2QGD7 858 aaPredicted RBP4.7□□□□□ -1.66
SPG11-206ENST00000558093 CCDC178Q5BJE1 867 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 SPDYAQ5MJ70 313 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 GAREM2Q75VX8 874 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 KRT26Q7Z3Y9 468 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 SGMS1Q86VZ5 419 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 ZNF808Q8N4W9 903 aaPredicted RBP4.7□□□□□ -1.66
SPG11-206ENST00000558093 AFAP1L2Q8N4X5 818 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 SH3RF3Q8TEJ3 882 aaPredicted RBP4.7□□□□□ -1.66
SPG11-206ENST00000558093 WWC2-AS2Q96NR7 200 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 ACAP3Q96P50 834 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 GPHA2Q96T91 129 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 TCF25Q9BQ70 676 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 EPC1Q9H2F5 836 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 NUMBLQ9Y6R0 609 aa4.7□□□□□ -1.66
SPG11-206ENST00000558093 A0A0A6YYK5 440 aaPredicted RBP4.69□□□□□ -1.66
SPG11-206ENST00000558093 UBE2QL1A1L167 161 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 NRP1O14786 923 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 CYP27B1O15528 508 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 DNAJC6O75061 913 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 ALDH1A2O94788 518 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 LPLP06858 475 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 GAAP10253 952 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 KIR2DL3P43628 341 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 NPEPPSP55786 919 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 CRHR2Q13324 411 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 UGT8Q16880 541 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 CT83Q5H943 113 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 ADGRE4PQ86SQ3 457 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 UNC5BQ8IZJ1 945 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 OR14C36Q8NHC7 312 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 WDR66Q8TBY9 1149 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 RSAD2Q8WXG1 361 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 SOX7Q9BT81 388 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 KCTD10Q9H3F6 313 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 AGO3Q9H9G7 860 aaKnown RBP4.69□□□□□ -1.66
SPG11-206ENST00000558093 SPC25Q9HBM1 224 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 TLR9Q9NR96 1032 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 TOPORSQ9NS56 1045 aaPredicted RBP4.69□□□□□ -1.66
SPG11-206ENST00000558093 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.69□□□□□ -1.66
SPG11-206ENST00000558093 MCM8Q9UJA3 840 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 JAG2Q9Y219 1238 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 MYRFQ9Y2G1 1151 aa4.69□□□□□ -1.66
SPG11-206ENST00000558093 GOLGA8AA7E2F4 631 aa4.68□□□□□ -1.66
SPG11-206ENST00000558093 PRAMEF4O60810 478 aa4.68□□□□□ -1.66
SPG11-206ENST00000558093 LY86O95711 162 aa4.68□□□□□ -1.66
SPG11-206ENST00000558093 VIL1P09327 827 aaKnown RBP4.68□□□□□ -1.66
SPG11-206ENST00000558093 HIBADHP31937 336 aaKnown RBP4.68□□□□□ -1.66
SPG11-206ENST00000558093 LGALS4P56470 323 aa4.68□□□□□ -1.66
SPG11-206ENST00000558093 KRTAP10-2P60368 255 aa4.68□□□□□ -1.66
SPG11-206ENST00000558093 CD69Q07108 199 aa4.68□□□□□ -1.66
SPG11-206ENST00000558093 FAM111BQ6SJ93 734 aa4.68□□□□□ -1.66
SPG11-206ENST00000558093 SPATS2Q86XZ4 545 aaKnown RBP4.68□□□□□ -1.66
SPG11-206ENST00000558093 PIK3C3Q8NEB9 887 aa4.68□□□□□ -1.66
SPG11-206ENST00000558093 EDAQ92838 391 aa4.68□□□□□ -1.66
SPG11-206ENST00000558093 MPHOSPH9Q99550 1183 aa4.68□□□□□ -1.66
SPG11-206ENST00000558093 ING3Q9NXR8 418 aa4.68□□□□□ -1.66
SPG11-206ENST00000558093 PRSS50Q9UI38 385 aa4.68□□□□□ -1.66
SPG11-206ENST00000558093 EDARQ9UNE0 448 aa4.68□□□□□ -1.66
SPG11-206ENST00000558093 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.68□□□□□ -1.66
SPG11-206ENST00000558093 C1QTNF3-AMACRE9PGA6 284 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 MTSS1O43312 755 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 SEC24DO94855 1032 aaPredicted RBP4.67□□□□□ -1.66
SPG11-206ENST00000558093 ENPP1P22413 925 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 FAPQ12884 760 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 TRIM25Q14258 630 aaKnown RBP4.67□□□□□ -1.66
SPG11-206ENST00000558093 R3HDM1Q15032 1099 aaKnown RBP4.67□□□□□ -1.66
SPG11-206ENST00000558093 PDCD1Q15116 288 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 CDSNQ15517 529 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 ELAVL1Q15717 326 aaKnown RBP4.67□□□□□ -1.66
SPG11-206ENST00000558093 FSCN1Q16658 493 aaKnown RBP4.67□□□□□ -1.66
SPG11-206ENST00000558093 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.67□□□□□ -1.66
SPG11-206ENST00000558093 NRN1LQ496H8 165 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 PITRM1Q5JRX3 1037 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 FKBP15Q5T1M5 1219 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 MFSD5Q6N075 450 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 SPRED1Q7Z699 444 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 CMTM4Q8IZR5 234 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 ANKRD35Q8N283 1001 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 MB21D1Q8N884 522 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 OR5M3Q8NGP4 307 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 TGFBRAP1Q8WUH2 860 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 EAF2Q96CJ1 260 aaPredicted RBP4.67□□□□□ -1.66
SPG11-206ENST00000558093 FDXACB1Q9BRP7 624 aaPredicted RBP4.67□□□□□ -1.66
SPG11-206ENST00000558093 EVLQ9UI08 416 aaPredicted RBP4.67□□□□□ -1.66
SPG11-206ENST00000558093 GIT1Q9Y2X7 761 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 SH3BP1Q9Y3L3 701 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 TESMINQ9Y4I5 508 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 CDY2AQ9Y6F7 541 aa4.67□□□□□ -1.66
SPG11-206ENST00000558093 GPR39O43194 453 aa4.66□□□□□ -1.66
SPG11-206ENST00000558093 IPO13O94829 963 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms