RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 KIAA0319LQ8IZA0 1049 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 RNF149Q8NC42 400 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 NLRP4Q96MN2 994 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 KIFC3Q9BVG8 833 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 GBP3Q9H0R5 595 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 KCTD10Q9H3F6 313 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 TMEM134Q9H6X4 195 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 PRDM10Q9NQV6 1147 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 STARD7Q9NQZ5 370 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 CGNQ9P2M7 1197 aaKnown RBP18.54■□□□□ 0.56
SNX1-203ENST00000558040 TBX20Q9UMR3 447 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 ADGRA3Q8IWK6 1321 aa18.53■□□□□ 0.56
SNX1-203ENST00000558040 A0A0U1RQG5 324 aaPredicted RBP18.53■□□□□ 0.56
SNX1-203ENST00000558040 K7ERI5 159 aa18.53■□□□□ 0.56
SNX1-203ENST00000558040 TREHO43280 583 aa18.53■□□□□ 0.56
SNX1-203ENST00000558040 SRGAP2CP0DJJ0 459 aa18.53■□□□□ 0.56
SNX1-203ENST00000558040 PMS1P54277 932 aaKnown RBP18.53■□□□□ 0.56
SNX1-203ENST00000558040 SNRPFP62306 86 aaKnown RBP18.53■□□□□ 0.56
SNX1-203ENST00000558040 ZCWPW2Q504Y3 356 aa18.53■□□□□ 0.56
SNX1-203ENST00000558040 CDCA2Q69YH5 1023 aaPredicted RBP18.53■□□□□ 0.56
SNX1-203ENST00000558040 ZNF410Q86VK4 478 aa18.53■□□□□ 0.56
SNX1-203ENST00000558040 MAP4K3Q8IVH8 894 aa18.53■□□□□ 0.56
SNX1-203ENST00000558040 NME8Q8N427 588 aa18.53■□□□□ 0.56
SNX1-203ENST00000558040 CSGALNACT2Q8N6G5 542 aa18.53■□□□□ 0.56
SNX1-203ENST00000558040 PPP1R13LQ8WUF5 828 aa18.53■□□□□ 0.56
SNX1-203ENST00000558040 SCLT1Q96NL6 688 aa18.53■□□□□ 0.56
SNX1-203ENST00000558040 MED15Q96RN5 788 aa18.53■□□□□ 0.56
SNX1-203ENST00000558040 NFKBIZQ9BYH8 718 aa18.53■□□□□ 0.56
SNX1-203ENST00000558040 FAM49AQ9H0Q0 323 aaPredicted RBP18.53■□□□□ 0.56
SNX1-203ENST00000558040 TRAF3IP3Q9Y228 551 aa18.53■□□□□ 0.56
SNX1-203ENST00000558040 VTNP04004 478 aa18.52■□□□□ 0.56
SNX1-203ENST00000558040 GJB1P08034 283 aa18.52■□□□□ 0.56
SNX1-203ENST00000558040 HOXD13P35453 343 aa18.52■□□□□ 0.56
SNX1-203ENST00000558040 FKBP3Q00688 224 aaKnown RBP18.52■□□□□ 0.56
SNX1-203ENST00000558040 KCNA1Q09470 495 aa18.52■□□□□ 0.56
SNX1-203ENST00000558040 HIC1Q14526 733 aa18.52■□□□□ 0.56
SNX1-203ENST00000558040 GDF6Q6KF10 455 aaPredicted RBP18.52■□□□□ 0.56
SNX1-203ENST00000558040 RSPH3Q86UC2 560 aa18.52■□□□□ 0.56
SNX1-203ENST00000558040 KSR1Q8IVT5 923 aa18.52■□□□□ 0.56
SNX1-203ENST00000558040 FAM114A1Q8IWE2 563 aa18.52■□□□□ 0.56
SNX1-203ENST00000558040 NLRP7Q8WX94 980 aa18.52■□□□□ 0.56
SNX1-203ENST00000558040 THAP9Q9H5L6 903 aa18.52■□□□□ 0.56
SNX1-203ENST00000558040 FANCLQ9NW38 375 aa18.52■□□□□ 0.56
SNX1-203ENST00000558040 ZMYM2Q9UBW7 1377 aa18.52■□□□□ 0.55
SNX1-203ENST00000558040 GRIN2DO15399 1336 aa18.51■□□□□ 0.55
SNX1-203ENST00000558040 SGPL1O95470 568 aa18.51■□□□□ 0.55
SNX1-203ENST00000558040 TFRCP02786 760 aaKnown RBP18.51■□□□□ 0.55
SNX1-203ENST00000558040 CAPN2P17655 700 aa18.51■□□□□ 0.55
SNX1-203ENST00000558040 RPL13P26373 211 aaKnown RBP18.51■□□□□ 0.55
SNX1-203ENST00000558040 GPC3P51654 580 aa18.51■□□□□ 0.55
SNX1-203ENST00000558040 PTENP60484 403 aa18.51■□□□□ 0.55
SNX1-203ENST00000558040 ZNF200P98182 395 aaPredicted RBP18.51■□□□□ 0.55
SNX1-203ENST00000558040 NFIL3Q16649 462 aa18.51■□□□□ 0.55
SNX1-203ENST00000558040 MAPK6Q16659 721 aa18.51■□□□□ 0.55
SNX1-203ENST00000558040 RUFY4Q6ZNE9 571 aa18.51■□□□□ 0.55
SNX1-203ENST00000558040 IFNLR1Q8IU57 520 aaPredicted RBP18.51■□□□□ 0.55
SNX1-203ENST00000558040 U2AF1L4Q8WU68 220 aaKnown RBP18.51■□□□□ 0.55
SNX1-203ENST00000558040 BICD1Q96G01 975 aa18.51■□□□□ 0.55
SNX1-203ENST00000558040 DUSP9Q99956 384 aaKnown RBP18.51■□□□□ 0.55
SNX1-203ENST00000558040 CRISPLD2Q9H0B8 497 aa18.51■□□□□ 0.55
SNX1-203ENST00000558040 NOD1Q9Y239 953 aa18.51■□□□□ 0.55
SNX1-203ENST00000558040 EVPLQ92817 2033 aa18.5■□□□□ 0.55
SNX1-203ENST00000558040 M0QZ92 97 aa18.5■□□□□ 0.55
SNX1-203ENST00000558040 TGFB1I1O43294 461 aa18.5■□□□□ 0.55
SNX1-203ENST00000558040 CDK11BP21127 795 aaKnown RBP18.5■□□□□ 0.55
SNX1-203ENST00000558040 NLRP11P59045 1033 aaKnown RBP18.5■□□□□ 0.55
SNX1-203ENST00000558040 SPAG1Q07617 926 aa18.5■□□□□ 0.55
SNX1-203ENST00000558040 PTGISQ16647 500 aa18.5■□□□□ 0.55
SNX1-203ENST00000558040 SERINC5Q86VE9 423 aa18.5■□□□□ 0.55
SNX1-203ENST00000558040 ANKRD20A12PQ8NF67 263 aa18.5■□□□□ 0.55
SNX1-203ENST00000558040 DNAJB3Q8WWF6 145 aa18.5■□□□□ 0.55
SNX1-203ENST00000558040 CEP63Q96MT8 703 aa18.5■□□□□ 0.55
SNX1-203ENST00000558040 SRRTQ9BXP5 876 aaKnown RBP18.5■□□□□ 0.55
SNX1-203ENST00000558040 AGPAT3Q9NRZ7 376 aa18.5■□□□□ 0.55
SNX1-203ENST00000558040 MAGEC2Q9UBF1 373 aaPredicted RBP18.5■□□□□ 0.55
SNX1-203ENST00000558040 SIP14410 1827 aa18.49■□□□□ 0.55
SNX1-203ENST00000558040 A0A087WZ62 844 aa18.49■□□□□ 0.55
SNX1-203ENST00000558040 INO80B-WBP1J3KQ70 363 aa18.49■□□□□ 0.55
SNX1-203ENST00000558040 HNRNPDLO14979 420 aaKnown RBP18.49■□□□□ 0.55
SNX1-203ENST00000558040 CETN3O15182 167 aa18.49■□□□□ 0.55
SNX1-203ENST00000558040 NR3C1P04150 777 aa18.49■□□□□ 0.55
SNX1-203ENST00000558040 PRKCBP05771 671 aa18.49■□□□□ 0.55
SNX1-203ENST00000558040 ZNF18P17022 549 aa18.49■□□□□ 0.55
SNX1-203ENST00000558040 NR2F2P24468 414 aa18.49■□□□□ 0.55
SNX1-203ENST00000558040 LIG4P49917 911 aa18.49■□□□□ 0.55
SNX1-203ENST00000558040 MYBPC2Q14324 1141 aa18.49■□□□□ 0.55
SNX1-203ENST00000558040 CDKAL1Q5VV42 579 aa18.49■□□□□ 0.55
SNX1-203ENST00000558040 TAS1R3Q7RTX0 852 aa18.49■□□□□ 0.55
SNX1-203ENST00000558040 SRGAP1Q7Z6B7 1085 aa18.49■□□□□ 0.55
SNX1-203ENST00000558040 SLC43A3Q8NBI5 491 aa18.49■□□□□ 0.55
SNX1-203ENST00000558040 ANP32BQ92688 251 aaKnown RBP18.49■□□□□ 0.55
SNX1-203ENST00000558040 FDXACB1Q9BRP7 624 aaPredicted RBP18.49■□□□□ 0.55
SNX1-203ENST00000558040 MRPL4Q9BYD3 311 aaKnown RBP18.49■□□□□ 0.55
SNX1-203ENST00000558040 GCOM2Q9BZD3 368 aaPredicted RBP18.49■□□□□ 0.55
SNX1-203ENST00000558040 INO80BQ9C086 356 aaPredicted RBP18.49■□□□□ 0.55
SNX1-203ENST00000558040 CCDC113Q9H0I3 377 aa18.49■□□□□ 0.55
SNX1-203ENST00000558040 SAMSN1Q9NSI8 373 aaKnown RBP18.49■□□□□ 0.55
SNX1-203ENST00000558040 PRMT7Q9NVM4 692 aaPredicted RBP18.49■□□□□ 0.55
SNX1-203ENST00000558040 PCNTO95613 3336 aa18.48■□□□□ 0.55
SNX1-203ENST00000558040 ARVCFO00192 962 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms