RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 LINC01599Q8WXQ3 324 aa28.22■■■□□ 2.11
SMAD6-202ENST00000557916 STAMQ92783 540 aa28.22■■■□□ 2.11
SMAD6-202ENST00000557916 SLC9A7Q96T83 725 aa28.22■■■□□ 2.11
SMAD6-202ENST00000557916 ADAM2Q99965 735 aa28.22■■■□□ 2.11
SMAD6-202ENST00000557916 TSPYL2Q9H2G4 693 aaPredicted RBP28.22■■■□□ 2.11
SMAD6-202ENST00000557916 TNMDQ9H2S6 317 aa28.22■■■□□ 2.11
SMAD6-202ENST00000557916 KBTBD4Q9NVX7 518 aa28.22■■■□□ 2.11
SMAD6-202ENST00000557916 TRIOBPQ9H2D6 2365 aa28.22■■■□□ 2.11
SMAD6-202ENST00000557916 TBCAO75347 108 aaKnown RBP28.21■■■□□ 2.11
SMAD6-202ENST00000557916 FAM13AO94988 1023 aa28.21■■■□□ 2.11
SMAD6-202ENST00000557916 ZSCAN20P17040 1043 aaPredicted RBP28.21■■■□□ 2.11
SMAD6-202ENST00000557916 NDUFA8P51970 172 aa28.21■■■□□ 2.11
SMAD6-202ENST00000557916 PCBP1Q15365 356 aaKnown RBP eCLIP28.21■■■□□ 2.11
SMAD6-202ENST00000557916 LRIT3Q3SXY7 679 aa28.21■■■□□ 2.11
SMAD6-202ENST00000557916 PHOSPHO2Q8TCD6 241 aa28.21■■■□□ 2.11
SMAD6-202ENST00000557916 KIFC3Q9BVG8 833 aa28.21■■■□□ 2.11
SMAD6-202ENST00000557916 LRRC27Q9C0I9 530 aa28.21■■■□□ 2.11
SMAD6-202ENST00000557916 GOLPH3LQ9H4A5 285 aa28.21■■■□□ 2.11
SMAD6-202ENST00000557916 MAGEF1Q9HAY2 307 aa28.21■■■□□ 2.11
SMAD6-202ENST00000557916 LARSQ9P2J5 1176 aaKnown RBP28.21■■■□□ 2.11
SMAD6-202ENST00000557916 KCNG1Q9UIX4 513 aa28.21■■■□□ 2.11
SMAD6-202ENST00000557916 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.2■■■□□ 2.11
SMAD6-202ENST00000557916 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.2■■■□□ 2.11
SMAD6-202ENST00000557916 ERLIN2O94905 339 aa28.2■■■□□ 2.11
SMAD6-202ENST00000557916 SYKP43405 635 aa28.2■■■□□ 2.11
SMAD6-202ENST00000557916 AMPD3Q01432 767 aa28.2■■■□□ 2.11
SMAD6-202ENST00000557916 DSC3Q14574 896 aa28.2■■■□□ 2.11
SMAD6-202ENST00000557916 FAM109BQ6ICB4 259 aaPredicted RBP28.2■■■□□ 2.11
SMAD6-202ENST00000557916 CEP57L1Q8IYX8 460 aa28.2■■■□□ 2.11
SMAD6-202ENST00000557916 MYOCDQ8IZQ8 938 aa28.2■■■□□ 2.11
SMAD6-202ENST00000557916 SPIRE2Q8WWL2 714 aa28.2■■■□□ 2.11
SMAD6-202ENST00000557916 ZHX3Q9H4I2 956 aa28.2■■■□□ 2.11
SMAD6-202ENST00000557916 KMT5AQ9NQR1 393 aa28.2■■■□□ 2.11
SMAD6-202ENST00000557916 CHST12Q9NRB3 414 aa28.2■■■□□ 2.11
SMAD6-202ENST00000557916 RGS18Q9NS28 235 aa28.2■■■□□ 2.11
SMAD6-202ENST00000557916 SERTAD1Q9UHV2 236 aa28.2■■■□□ 2.11
SMAD6-202ENST00000557916 PIN4Q9Y237 131 aaKnown RBP28.2■■■□□ 2.11
SMAD6-202ENST00000557916 ADGRA3Q8IWK6 1321 aa28.2■■■□□ 2.1
SMAD6-202ENST00000557916 MICAL3Q7RTP6 2002 aa28.2■■■□□ 2.1
SMAD6-202ENST00000557916 SLFN14P0C7P3 912 aa28.19■■■□□ 2.1
SMAD6-202ENST00000557916 ZNF131P52739 623 aa28.19■■■□□ 2.1
SMAD6-202ENST00000557916 EFNA5P52803 228 aa28.19■■■□□ 2.1
SMAD6-202ENST00000557916 SMTNP53814 917 aa28.19■■■□□ 2.1
SMAD6-202ENST00000557916 MYCT1Q8N699 235 aa28.19■■■□□ 2.1
SMAD6-202ENST00000557916 DNAJC19Q96DA6 116 aa28.19■■■□□ 2.1
SMAD6-202ENST00000557916 NTPCRQ9BSD7 190 aaKnown RBP28.19■■■□□ 2.1
SMAD6-202ENST00000557916 PARVGQ9HBI0 331 aa28.19■■■□□ 2.1
SMAD6-202ENST00000557916 USP25Q9UHP3 1055 aa28.19■■■□□ 2.1
SMAD6-202ENST00000557916 GRXCR1A8MXD5 290 aa28.18■■■□□ 2.1
SMAD6-202ENST00000557916 NCBP1Q09161 790 aaKnown RBP28.18■■■□□ 2.1
SMAD6-202ENST00000557916 HABP4Q5JVS0 413 aaKnown RBP28.18■■■□□ 2.1
SMAD6-202ENST00000557916 TMCO2Q7Z6W1 182 aaPredicted RBP28.18■■■□□ 2.1
SMAD6-202ENST00000557916 C1orf112Q9NSG2 853 aa28.18■■■□□ 2.1
SMAD6-202ENST00000557916 AGPAT5Q9NUQ2 364 aa28.18■■■□□ 2.1
SMAD6-202ENST00000557916 PRMT7Q9NVM4 692 aaPredicted RBP28.18■■■□□ 2.1
SMAD6-202ENST00000557916 SLC16A4O15374 487 aa28.18■■■□□ 2.1
SMAD6-202ENST00000557916 ACTN4O43707 911 aaKnown RBP28.18■■■□□ 2.1
SMAD6-202ENST00000557916 TSPAN1O60635 241 aa28.18■■■□□ 2.1
SMAD6-202ENST00000557916 MAPK6Q16659 721 aa28.18■■■□□ 2.1
SMAD6-202ENST00000557916 AMHR2Q16671 573 aa28.18■■■□□ 2.1
SMAD6-202ENST00000557916 LONRF3Q496Y0 759 aa28.18■■■□□ 2.1
SMAD6-202ENST00000557916 SLC24A5Q71RS6 500 aa28.18■■■□□ 2.1
SMAD6-202ENST00000557916 HERC6Q8IVU3 1022 aa28.18■■■□□ 2.1
SMAD6-202ENST00000557916 FZD8Q9H461 694 aa28.18■■■□□ 2.1
SMAD6-202ENST00000557916 DACT1Q9NYF0 836 aa28.18■■■□□ 2.1
SMAD6-202ENST00000557916 LIG1P18858 919 aa28.17■■■□□ 2.1
SMAD6-202ENST00000557916 HOXA11P31270 313 aaPredicted RBP28.17■■■□□ 2.1
SMAD6-202ENST00000557916 PPP4R3CPQ6ZMV5 832 aa28.17■■■□□ 2.1
SMAD6-202ENST00000557916 TMEM87AQ8NBN3 555 aa28.17■■■□□ 2.1
SMAD6-202ENST00000557916 TOP1MTQ969P6 601 aa28.17■■■□□ 2.1
SMAD6-202ENST00000557916 TRIM9Q9C026 710 aa28.17■■■□□ 2.1
SMAD6-202ENST00000557916 CCDC113Q9H0I3 377 aa28.17■■■□□ 2.1
SMAD6-202ENST00000557916 ARHGAP28Q9P2N2 729 aa28.17■■■□□ 2.1
SMAD6-202ENST00000557916 C9IYK1 514 aa28.16■■■□□ 2.1
SMAD6-202ENST00000557916 K7ERI5 159 aa28.16■■■□□ 2.1
SMAD6-202ENST00000557916 UPP2O95045 317 aa28.16■■■□□ 2.1
SMAD6-202ENST00000557916 PRKCBP05771 671 aa28.16■■■□□ 2.1
SMAD6-202ENST00000557916 IDEP14735 1019 aa28.16■■■□□ 2.1
SMAD6-202ENST00000557916 AXLP30530 894 aa28.16■■■□□ 2.1
SMAD6-202ENST00000557916 AFMP43652 599 aa28.16■■■□□ 2.1
SMAD6-202ENST00000557916 FAM187BQ17R55 369 aa28.16■■■□□ 2.1
SMAD6-202ENST00000557916 TWF2Q6IBS0 349 aaKnown RBP28.16■■■□□ 2.1
SMAD6-202ENST00000557916 FAM117BQ6P1L5 589 aa28.16■■■□□ 2.1
SMAD6-202ENST00000557916 PRIMPOLQ96LW4 560 aa28.16■■■□□ 2.1
SMAD6-202ENST00000557916 ZBED2Q9BTP6 218 aa28.16■■■□□ 2.1
SMAD6-202ENST00000557916 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.15■■■□□ 2.1
SMAD6-202ENST00000557916 B4GALT5O43286 388 aa28.15■■■□□ 2.1
SMAD6-202ENST00000557916 TRAK2O60296 914 aa28.15■■■□□ 2.1
SMAD6-202ENST00000557916 IBSPP21815 317 aaPredicted RBP28.15■■■□□ 2.1
SMAD6-202ENST00000557916 SARSP49591 514 aaKnown RBP28.15■■■□□ 2.1
SMAD6-202ENST00000557916 TMEM161BQ8NDZ6 487 aa28.15■■■□□ 2.1
SMAD6-202ENST00000557916 CPB2Q96IY4 423 aa28.15■■■□□ 2.1
SMAD6-202ENST00000557916 C7orf25Q9BPX7 421 aa28.15■■■□□ 2.1
SMAD6-202ENST00000557916 TMEM134Q9H6X4 195 aa28.15■■■□□ 2.1
SMAD6-202ENST00000557916 LAMA2P24043 3122 aaKnown RBP28.15■■■□□ 2.1
SMAD6-202ENST00000557916 ACKR2O00590 384 aa28.14■■■□□ 2.1
SMAD6-202ENST00000557916 ZNF202O95125 648 aa28.14■■■□□ 2.1
SMAD6-202ENST00000557916 GJB5O95377 273 aa28.14■■■□□ 2.1
SMAD6-202ENST00000557916 GAP43P17677 238 aa28.14■■■□□ 2.1
SMAD6-202ENST00000557916 ARF4P18085 180 aaPredicted RBP28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms