RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 MBD3O95983 291 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 CD52P31358 61 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 MBTD1Q05BQ5 628 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 NFKBIBQ15653 356 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 FAM228AQ86W67 206 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 TMEM161BQ8NDZ6 487 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 SPIRE2Q8WWL2 714 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 INO80BQ9C086 356 aaPredicted RBP16.86■□□□□ 0.29
NEDD1-213ENST00000557644 CLSTN2Q9H4D0 955 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 ARHGAP28Q9P2N2 729 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 PVALEFA0A1B0GWK0 134 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 GAP43P17677 238 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 CASP5P51878 434 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 POU5F1BQ06416 359 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 EHHADHQ08426 723 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 TCTN1Q2MV58 587 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 TAS1R3Q7RTX0 852 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 ELOA2Q8IYF1 753 aaPredicted RBP16.85■□□□□ 0.29
NEDD1-213ENST00000557644 ZNF710Q8N1W2 664 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 TMEM199Q8N511 208 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 NFKBIZQ9BYH8 718 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 MRPL44Q9H9J2 332 aaKnown RBP16.85■□□□□ 0.29
NEDD1-213ENST00000557644 MYH11P35749 1972 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 TET1Q8NFU7 2136 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 K7ENM7 598 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 RPS6KA5O75582 802 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 EDN1P05305 212 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 ACRP10323 421 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 SMTNP53814 917 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 NCKAP1LP55160 1127 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 NFX1Q12986 1120 aaKnown RBP16.85■□□□□ 0.29
NEDD1-213ENST00000557644 ZC2HC1CQ53FD0 456 aaPredicted RBP16.85■□□□□ 0.29
NEDD1-213ENST00000557644 TSHZ1Q6ZSZ6 1077 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 IFNLR1Q8IU57 520 aaPredicted RBP16.85■□□□□ 0.29
NEDD1-213ENST00000557644 IFIH1Q9BYX4 1025 aaKnown RBP16.85■□□□□ 0.29
NEDD1-213ENST00000557644 HOOK1Q9UJC3 728 aaKnown RBP16.85■□□□□ 0.29
NEDD1-213ENST00000557644 PADI3Q9ULW8 664 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 ST3GAL5Q9UNP4 418 aa16.85■□□□□ 0.29
NEDD1-213ENST00000557644 TANC1Q9C0D5 1861 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 PDE4DIPQ5VU43 2346 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 DENND3A2RUS2 1198 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 TTLL13PA6NNM8 815 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 ZNF720Q7Z2F6 126 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 HAUS6Q7Z4H7 955 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 SRGAP1Q7Z6B7 1085 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 ZBTB8OSQ8IWT0 167 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 CCDC113Q9H0I3 377 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 NUP62CLQ9H1M0 184 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 OLFML3Q9NRN5 406 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 EXOC1Q9NV70 894 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 SEL1LQ9UBV2 794 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 B4GALT5O43286 388 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 CXCL10P02778 98 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 MYBP10242 640 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 MAPTP10636 758 aaKnown RBP16.84■□□□□ 0.29
NEDD1-213ENST00000557644 EPHB4P54760 987 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 DBF4BQ8NFT6 615 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 SPATA20Q8TB22 786 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 SLC39A2Q9NP94 309 aa16.84■□□□□ 0.29
NEDD1-213ENST00000557644 LAMA3Q16787 3333 aa16.83■□□□□ 0.29
NEDD1-213ENST00000557644 H0YGN5 161 aa16.83■□□□□ 0.28
NEDD1-213ENST00000557644 K7ERI5 159 aa16.83■□□□□ 0.28
NEDD1-213ENST00000557644 GCNT3O95395 438 aa16.83■□□□□ 0.28
NEDD1-213ENST00000557644 STK4Q13043 487 aa16.83■□□□□ 0.28
NEDD1-213ENST00000557644 PAK2Q13177 524 aa16.83■□□□□ 0.28
NEDD1-213ENST00000557644 AMHR2Q16671 573 aa16.83■□□□□ 0.28
NEDD1-213ENST00000557644 PLEKHG4Q58EX7 1191 aa16.83■□□□□ 0.28
NEDD1-213ENST00000557644 FAM26FQ5R3K3 315 aa16.83■□□□□ 0.28
NEDD1-213ENST00000557644 ISM2Q6H9L7 571 aa16.83■□□□□ 0.28
NEDD1-213ENST00000557644 C16orf59Q7L2K0 433 aa16.83■□□□□ 0.28
NEDD1-213ENST00000557644 CATSPER4Q7RTX7 472 aa16.83■□□□□ 0.28
NEDD1-213ENST00000557644 SMARCE1Q969G3 411 aa16.83■□□□□ 0.28
NEDD1-213ENST00000557644 C2orf40Q9H1Z8 148 aa16.83■□□□□ 0.28
NEDD1-213ENST00000557644 ERVK-5Q9HDB9 667 aa16.83■□□□□ 0.28
NEDD1-213ENST00000557644 LTBP2Q14767 1821 aa16.82■□□□□ 0.28
NEDD1-213ENST00000557644 SARSP49591 514 aaKnown RBP16.82■□□□□ 0.28
NEDD1-213ENST00000557644 FPGSQ05932 587 aa16.82■□□□□ 0.28
NEDD1-213ENST00000557644 KCNA1Q09470 495 aa16.82■□□□□ 0.28
NEDD1-213ENST00000557644 USP38Q8NB14 1042 aa16.82■□□□□ 0.28
NEDD1-213ENST00000557644 IKZF4Q9H2S9 585 aa16.82■□□□□ 0.28
NEDD1-213ENST00000557644 TMX1Q9H3N1 280 aa16.82■□□□□ 0.28
NEDD1-213ENST00000557644 FZD8Q9H461 694 aa16.82■□□□□ 0.28
NEDD1-213ENST00000557644 TMEM63CQ9P1W3 806 aa16.82■□□□□ 0.28
NEDD1-213ENST00000557644 SQORQ9Y6N5 450 aa16.82■□□□□ 0.28
NEDD1-213ENST00000557644 RHOBTB3O94955 611 aa16.82■□□□□ 0.28
NEDD1-213ENST00000557644 PARNO95453 639 aaKnown RBP16.82■□□□□ 0.28
NEDD1-213ENST00000557644 PRKCBP05771 671 aa16.82■□□□□ 0.28
NEDD1-213ENST00000557644 SFPQP23246 707 aaKnown RBP eCLIP16.82■□□□□ 0.28
NEDD1-213ENST00000557644 EFNA5P52803 228 aa16.82■□□□□ 0.28
NEDD1-213ENST00000557644 MLLT1Q03111 559 aaPredicted RBP16.82■□□□□ 0.28
NEDD1-213ENST00000557644 MAPK6Q16659 721 aa16.82■□□□□ 0.28
NEDD1-213ENST00000557644 KIAA0895Q8NCT3 520 aa16.82■□□□□ 0.28
NEDD1-213ENST00000557644 LBHD1Q9BQE6 289 aaPredicted RBP16.82■□□□□ 0.28
NEDD1-213ENST00000557644 BIN1O00499 593 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 GPR182O15218 404 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 TSPAN1O60635 241 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 PPP1R37O75864 691 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 SMC2O95347 1197 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 RFC2P35250 354 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 MAGEA10P43363 369 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms