RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 RNF220Q5VTB9 566 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 FOXB2Q5VYV0 432 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 DENND2CQ68D51 928 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 CNNM4Q6P4Q7 775 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 DTHD1Q6ZMT9 781 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 TMTC3Q6ZXV5 915 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 SEPT12Q8IYM1 358 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 PIGOQ8TEQ8 1089 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 MAIP1Q8WWC4 291 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 NACC2Q96BF6 587 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 SLC39A3Q9BRY0 314 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 STMN4Q9H169 189 aaPredicted RBP11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 LRMDAQ9H2I8 198 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 DPH5Q9H2P9 285 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 PLSCR2Q9NRY7 297 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 FGFR1OP2Q9NVK5 253 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 UBAP1Q9NZ09 502 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 SPATA7Q9P0W8 599 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 HDAC9Q9UKV0 1011 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 PHF24Q9UPV7 400 aa11.29□□□□□ -0.6
SUPT16H-207ENST00000557394 NHSQ6T4R5 1651 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 MROH7Q68CQ1 1323 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 BBOX1O75936 387 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 RFC5P40937 340 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 UBA7P41226 1012 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 ACVR2BQ13705 512 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 FAM83BQ5T0W9 1011 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 FOXR2Q6PJQ5 311 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 SLFN11Q7Z7L1 901 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 AGGF1Q8N302 714 aaeCLIP11.28□□□□□ -0.61e-8■□□□□ 9.2
SUPT16H-207ENST00000557394 DNAJC9Q8WXX5 260 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 PIGBQ92521 554 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 AZIN2Q96A70 460 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 ERP27Q96DN0 273 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 TMEM237Q96Q45 408 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 CELF4Q9BZC1 486 aaKnown RBP11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 UBE2OQ9C0C9 1292 aaKnown RBP11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 ZCWPW1Q9H0M4 648 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 ZWILCHQ9H900 591 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 TMEM165Q9HC07 324 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 AIPL1Q9NZN9 384 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 DLGAP2Q9P1A6 1054 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 SBF2Q86WG5 1849 aa11.28□□□□□ -0.6
SUPT16H-207ENST00000557394 TLDC2A0PJX2 215 aa11.27□□□□□ -0.6
SUPT16H-207ENST00000557394 ADAMTS3O15072 1205 aa11.27□□□□□ -0.6
SUPT16H-207ENST00000557394 GM2AP17900 193 aa11.27□□□□□ -0.6
SUPT16H-207ENST00000557394 GNAT2P19087 354 aa11.27□□□□□ -0.6
SUPT16H-207ENST00000557394 IFNAR2P48551 515 aa11.27□□□□□ -0.6
SUPT16H-207ENST00000557394 DRG2P55039 364 aaKnown RBP11.27□□□□□ -0.6
SUPT16H-207ENST00000557394 SH3BGRP55822 239 aaPredicted RBP11.27□□□□□ -0.6
SUPT16H-207ENST00000557394 TCEAL1Q15170 157 aa11.27□□□□□ -0.6
SUPT16H-207ENST00000557394 MFSD5Q6N075 450 aa11.27□□□□□ -0.6
SUPT16H-207ENST00000557394 LRRC55Q6ZSA7 311 aa11.27□□□□□ -0.6
SUPT16H-207ENST00000557394 KRT77Q7Z794 578 aa11.27□□□□□ -0.6
SUPT16H-207ENST00000557394 DMAP1Q9NPF5 467 aaPredicted RBP11.27□□□□□ -0.6
SUPT16H-207ENST00000557394 SUCLA2Q9P2R7 463 aaPredicted RBP11.27□□□□□ -0.6
SUPT16H-207ENST00000557394 RPL26L1Q9UNX3 145 aaKnown RBP11.27□□□□□ -0.6
SUPT16H-207ENST00000557394 SIGLEC16A6NMB1 481 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 NBPF26B4DH59 902 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 TCP11X1B4DZS4 312 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 ATP5HO75947 161 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 PENKP01210 267 aaPredicted RBP11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 CALM1P0DP23 149 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 CALM2P0DP24 149 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 CALM3P0DP25 149 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 TPP2P29144 1249 aaPredicted RBP11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 NLRP5P59047 1200 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 MGAT5Q09328 741 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 TROAPQ12815 778 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 ENOX2Q16206 610 aaKnown RBP11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 WASHC2DQ5SRD0 308 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 DPY19L2Q6NUT2 758 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 TAOK1Q7L7X3 1001 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 NBPF15Q8N660 670 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 ENAHQ8N8S7 591 aaPredicted RBP11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 RBBP8NLQ8NC74 664 aaPredicted RBP11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 ZNF333Q96JL9 665 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 FGD4Q96M96 766 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 TRIM51Q9BSJ1 452 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 FAM192AQ9GZU8 254 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 ARMT1Q9H993 441 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 ETNK1Q9HBU6 452 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 NLRC4Q9NPP4 1024 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 TXLNGQ9NUQ3 528 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 CTTNBP2NLQ9P2B4 639 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 RPTORQ8N122 1335 aa11.27□□□□□ -0.61
SUPT16H-207ENST00000557394 FAM187AA6NFU0 413 aa11.26□□□□□ -0.61
SUPT16H-207ENST00000557394 CSF1RP07333 972 aa11.26□□□□□ -0.61
SUPT16H-207ENST00000557394 SCG2P13521 617 aa11.26□□□□□ -0.61
SUPT16H-207ENST00000557394 PLCG1P19174 1290 aa11.26□□□□□ -0.61
SUPT16H-207ENST00000557394 PTDSS1P48651 473 aaKnown RBP11.26□□□□□ -0.61
SUPT16H-207ENST00000557394 POLE2P56282 527 aa11.26□□□□□ -0.61
SUPT16H-207ENST00000557394 PTENP60484 403 aa11.26□□□□□ -0.61
SUPT16H-207ENST00000557394 ASIC1P78348 528 aa11.26□□□□□ -0.61
SUPT16H-207ENST00000557394 LRRC63Q05C16 580 aa11.26□□□□□ -0.61
SUPT16H-207ENST00000557394 USP4Q13107 963 aa11.26□□□□□ -0.61
SUPT16H-207ENST00000557394 AUHQ13825 339 aaKnown RBP11.26□□□□□ -0.61
SUPT16H-207ENST00000557394 ZDHHC24Q6UX98 284 aa11.26□□□□□ -0.61
SUPT16H-207ENST00000557394 FAM13CQ8NE31 585 aa11.26□□□□□ -0.61
SUPT16H-207ENST00000557394 TPCN2Q8NHX9 752 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms