RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 RFX1P22670 979 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 KLRC2P26717 231 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 PBX3P40426 434 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 FGD1P98174 961 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 EXOSC10Q01780 885 aaKnown RBP11.5□□□□□ -0.57
RDH11-210ENST00000557331 PRKCEQ02156 737 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 PCBP1Q15365 356 aaKnown RBP eCLIP11.5□□□□□ -0.57
RDH11-210ENST00000557331 ANGPT1Q15389 498 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 TMC5Q6UXY8 1006 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 GPR65Q8IYL9 337 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 LRRC71Q8N4P6 559 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 CNNM3Q8NE01 707 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 FAM193BQ96PV7 902 aaPredicted RBP11.5□□□□□ -0.57
RDH11-210ENST00000557331 ESYT1Q9BSJ8 1104 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 KCNK12Q9HB15 430 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 TBC1D13Q9NVG8 400 aa11.5□□□□□ -0.57
RDH11-210ENST00000557331 CACNA1BQ00975 2339 aa11.49□□□□□ -0.57
RDH11-210ENST00000557331 NT5C1B-RDH14C9J2C7 533 aa11.49□□□□□ -0.57
RDH11-210ENST00000557331 NR1I2O75469 434 aa11.49□□□□□ -0.57
RDH11-210ENST00000557331 ADH1AP07327 375 aa11.49□□□□□ -0.57
RDH11-210ENST00000557331 EPCAMP16422 314 aa11.49□□□□□ -0.57
RDH11-210ENST00000557331 SDHBP21912 280 aa11.49□□□□□ -0.57
RDH11-210ENST00000557331 TARBP2Q15633 366 aaKnown RBP11.49□□□□□ -0.57
RDH11-210ENST00000557331 PTPN14Q15678 1187 aa11.49□□□□□ -0.57
RDH11-210ENST00000557331 TRMT1LQ7Z2T5 733 aaKnown RBP11.49□□□□□ -0.57
RDH11-210ENST00000557331 FAM177A1Q8N128 213 aaPredicted RBP11.49□□□□□ -0.57
RDH11-210ENST00000557331 C12orf76Q8N812 135 aaPredicted RBP11.49□□□□□ -0.57
RDH11-210ENST00000557331 KCNG4Q8TDN1 519 aa11.49□□□□□ -0.57
RDH11-210ENST00000557331 TEKT3Q9BXF9 490 aa11.49□□□□□ -0.57
RDH11-210ENST00000557331 LRRC2Q9BYS8 371 aa11.49□□□□□ -0.57
RDH11-210ENST00000557331 ANO2Q9NQ90 1003 aa11.49□□□□□ -0.57
RDH11-210ENST00000557331 FAM105AQ9NUU6 356 aa11.49□□□□□ -0.57
RDH11-210ENST00000557331 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.49□□□□□ -0.57
RDH11-210ENST00000557331 DAXXQ9UER7 740 aaPredicted RBP11.49□□□□□ -0.57
RDH11-210ENST00000557331 ZFP37Q9Y6Q3 630 aaPredicted RBP11.49□□□□□ -0.57
RDH11-210ENST00000557331 OTOGLQ3ZCN5 2332 aa11.49□□□□□ -0.57
RDH11-210ENST00000557331 EPG5Q9HCE0 2579 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 FRYLO94915 3013 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 IGKV6-21A0A0C4DH24 114 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 STK25O00506 426 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 PRPF3O43395 683 aaKnown RBP11.48□□□□□ -0.57
RDH11-210ENST00000557331 OFD1O75665 1012 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 CLCN4P51793 760 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 NCBP1Q09161 790 aaKnown RBP11.48□□□□□ -0.57
RDH11-210ENST00000557331 LRCH2Q5VUJ6 765 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 CWF19L1Q69YN2 538 aaKnown RBP11.48□□□□□ -0.57
RDH11-210ENST00000557331 PHLDB3Q6NSJ2 640 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 CATSPER4Q7RTX7 472 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 RAB11FIP4Q86YS3 637 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 SIX5Q8N196 739 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 SLC5A5Q92911 643 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 SHDQ96IW2 340 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 KLHL5Q96PQ7 755 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 PLEKHA4Q9H4M7 779 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 NRDE2Q9H7Z3 1164 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 WDR6Q9NNW5 1121 aaKnown RBP11.48□□□□□ -0.57
RDH11-210ENST00000557331 SH3GLB2Q9NR46 395 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 EPS15L1Q9UBC2 864 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 PIN4Q9Y237 131 aaKnown RBP11.48□□□□□ -0.57
RDH11-210ENST00000557331 FAN1Q9Y2M0 1017 aa11.48□□□□□ -0.57
RDH11-210ENST00000557331 DMXL1Q9Y485 3027 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 KLF18A0A0U1RQI7 1052 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 GAS2O43903 313 aaKnown RBP11.47□□□□□ -0.57
RDH11-210ENST00000557331 ZNF862O60290 1169 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 LILRB3O75022 631 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 MAFO75444 373 aaPredicted RBP11.47□□□□□ -0.57
RDH11-210ENST00000557331 PAPLNO95428 1278 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 URODP06132 367 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 CNPP09543 421 aaKnown RBP11.47□□□□□ -0.57
RDH11-210ENST00000557331 WEE2P0C1S8 567 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 SRFP11831 508 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 NPR3P17342 541 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 CREMQ03060 361 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 PUM1Q14671 1186 aaKnown RBP eCLIP11.47□□□□□ -0.57
RDH11-210ENST00000557331 SRGAP1Q7Z6B7 1085 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 MRPL10Q7Z7H8 261 aaKnown RBP11.47□□□□□ -0.57
RDH11-210ENST00000557331 FBXL16Q8N461 479 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 GPR161Q8N6U8 529 aaKnown RBP11.47□□□□□ -0.57
RDH11-210ENST00000557331 LENG9Q96B70 501 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 CCDC136Q96JN2 1154 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.47□□□□□ -0.57
RDH11-210ENST00000557331 SUCLA2Q9P2R7 463 aaPredicted RBP11.47□□□□□ -0.57
RDH11-210ENST00000557331 BRPF3Q9ULD4 1205 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 PCDHB2Q9Y5E7 798 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 NCOR2Q9Y618 2525 aa11.47□□□□□ -0.57
RDH11-210ENST00000557331 A0A087WZ62 844 aa11.46□□□□□ -0.57
RDH11-210ENST00000557331 MSH4O15457 936 aa11.46□□□□□ -0.57
RDH11-210ENST00000557331 ASAP2O43150 1006 aa11.46□□□□□ -0.57
RDH11-210ENST00000557331 GLUD1P00367 558 aa11.46□□□□□ -0.57
RDH11-210ENST00000557331 SOD2P04179 222 aa11.46□□□□□ -0.57
RDH11-210ENST00000557331 Q4G0T1 1027 aa11.46□□□□□ -0.57
RDH11-210ENST00000557331 GALNT17Q6IS24 598 aa11.46□□□□□ -0.57
RDH11-210ENST00000557331 MOXD1Q6UVY6 613 aa11.46□□□□□ -0.57
RDH11-210ENST00000557331 MIER3Q7Z3K6 550 aa11.46□□□□□ -0.57
RDH11-210ENST00000557331 RHPN2Q8IUC4 686 aa11.46□□□□□ -0.57
RDH11-210ENST00000557331 HACE1Q8IYU2 909 aa11.46□□□□□ -0.57
RDH11-210ENST00000557331 SLC7A3Q8WY07 619 aa11.46□□□□□ -0.57
RDH11-210ENST00000557331 CCDC51Q96ER9 411 aa11.46□□□□□ -0.57
RDH11-210ENST00000557331 RPS6KC1Q96S38 1066 aa11.46□□□□□ -0.57
RDH11-210ENST00000557331 FDXACB1Q9BRP7 624 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms