RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 IBSPP21815 317 aaPredicted RBP15.03■□□□□ -0
SHMT2-228ENST00000557302 NAMPTP43490 491 aa15.03■□□□□ -0
SHMT2-228ENST00000557302 SARSP49591 514 aaKnown RBP15.03■□□□□ -0
SHMT2-228ENST00000557302 MBTD1Q05BQ5 628 aa15.03■□□□□ -0
SHMT2-228ENST00000557302 RAD51AP2Q09MP3 1159 aa15.03■□□□□ -0
SHMT2-228ENST00000557302 MCM6Q14566 821 aa15.03■□□□□ -0
SHMT2-228ENST00000557302 CDCA2Q69YH5 1023 aaPredicted RBP15.03■□□□□ -0
SHMT2-228ENST00000557302 NPAS4Q8IUM7 802 aa15.03■□□□□ -0
SHMT2-228ENST00000557302 DEPTORQ8TB45 409 aa15.03■□□□□ -0
SHMT2-228ENST00000557302 LEO1Q8WVC0 666 aaPredicted RBP15.03■□□□□ -0
SHMT2-228ENST00000557302 CHAMP1Q96JM3 812 aa15.03■□□□□ -0
SHMT2-228ENST00000557302 SCAND2PQ9GZW5 306 aaPredicted RBP15.03■□□□□ -0
SHMT2-228ENST00000557302 SLC28A3Q9HAS3 691 aa15.03■□□□□ -0
SHMT2-228ENST00000557302 AGPAT5Q9NUQ2 364 aa15.03■□□□□ -0
SHMT2-228ENST00000557302 DACT1Q9NYF0 836 aa15.03■□□□□ -0
SHMT2-228ENST00000557302 LRFN2Q9ULH4 789 aa15.03■□□□□ -0
SHMT2-228ENST00000557302 PIN4Q9Y237 131 aaKnown RBP15.03■□□□□ -0
SHMT2-228ENST00000557302 INSL6Q9Y581 213 aa15.03■□□□□ -0
SHMT2-228ENST00000557302 C9IYK1 514 aa15.02■□□□□ -0
SHMT2-228ENST00000557302 KRT18P05783 430 aaKnown RBP15.02■□□□□ -0
SHMT2-228ENST00000557302 CA3P07451 260 aa15.02■□□□□ -0
SHMT2-228ENST00000557302 STAT6P42226 847 aa15.02■□□□□ -0
SHMT2-228ENST00000557302 HTRA4P83105 476 aaPredicted RBP15.02■□□□□ -0
SHMT2-228ENST00000557302 NCBP1Q09161 790 aaKnown RBP15.02■□□□□ -0
SHMT2-228ENST00000557302 MAPK7Q13164 816 aa15.02■□□□□ -0
SHMT2-228ENST00000557302 DMP1Q13316 513 aaPredicted RBP15.02■□□□□ -0
SHMT2-228ENST00000557302 PPP2R2DQ66LE6 453 aa15.02■□□□□ -0
SHMT2-228ENST00000557302 TWF2Q6IBS0 349 aaKnown RBP15.02■□□□□ -0
SHMT2-228ENST00000557302 SHC4Q6S5L8 630 aa15.02■□□□□ -0
SHMT2-228ENST00000557302 DAW1Q8N136 415 aa15.02■□□□□ -0
SHMT2-228ENST00000557302 YME1L1Q96TA2 773 aa15.02■□□□□ -0
SHMT2-228ENST00000557302 PANK2Q9BZ23 570 aa15.02■□□□□ -0
SHMT2-228ENST00000557302 CIZ1Q9ULV3 898 aaPredicted RBP15.02■□□□□ -0
SHMT2-228ENST00000557302 PCDHB7Q9Y5E2 793 aa15.02■□□□□ -0
SHMT2-228ENST00000557302 TTC3P53804 2025 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 A0A087X0B3 334 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 TSPAN1O60635 241 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 EFNA5P52803 228 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 PEX3P56589 373 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 FAM189BP81408 668 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 NAALADL2Q58DX5 795 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 ARSHQ5FYA8 562 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 SV2BQ7L1I2 683 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 CRIPAKQ8N1N5 446 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 DEFB123Q8N688 67 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 PDILTQ8N807 584 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 ZNF576Q9H609 170 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 C17orf75Q9HAS0 396 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 PRMT7Q9NVM4 692 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-228ENST00000557302 TMEM161AQ9NX61 479 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 FAM13BQ9NYF5 915 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 ODF2LQ9ULJ1 636 aa15.01□□□□□ -0.01
SHMT2-228ENST00000557302 PTPRSQ13332 1948 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 NPHP3-ACAD11A0A0J9YXS1 232 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 A0A0U1RQF3 1178 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 LCHNA4D1U4 455 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 CCDC169A6NNP5 214 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 SFI1A8K8P3 1242 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 PLS3P13797 630 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 AXLP30530 894 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 HOXA11P31270 313 aaPredicted RBP15□□□□□ -0.01
SHMT2-228ENST00000557302 NPTX2P47972 431 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 RAB27AP51159 221 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 MAPK6Q16659 721 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 RESP18Q5W5W9 173 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 Q7L0L9 218 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 ECHDC2Q86YB7 292 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 CCDC51Q96ER9 411 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 PRIMPOLQ96LW4 560 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 REEP2Q9BRK0 252 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 KIFC3Q9BVG8 833 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 TRAIPQ9BWF2 469 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 TTYH1Q9H313 450 aaPredicted RBP15□□□□□ -0.01
SHMT2-228ENST00000557302 SEMA6BQ9H3T3 888 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 ELAC1Q9H777 363 aaKnown RBP15□□□□□ -0.01
SHMT2-228ENST00000557302 KMT5AQ9NQR1 393 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 KCNG1Q9UIX4 513 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 CHD9Q3L8U1 2897 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 UNC80Q8N2C7 3258 aa15□□□□□ -0.01
SHMT2-228ENST00000557302 ADGRA3Q8IWK6 1321 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 EYSQ5T1H1 3165 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 TBCAO75347 108 aaKnown RBP14.99□□□□□ -0.01
SHMT2-228ENST00000557302 DGKIO75912 1065 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 FAM13AO94988 1023 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 PRKCBP05771 671 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 SKIP12755 728 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 LIG1P18858 919 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 SMTNP53814 917 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 TAP1Q03518 808 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 AMHR2Q16671 573 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 FAM187BQ17R55 369 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 ADALQ6DHV7 355 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 NOTUMQ6P988 496 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 IQUBQ8NA54 791 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 RNF169Q8NCN4 708 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 SP7Q8TDD2 431 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-228ENST00000557302 SPIRE2Q8WWL2 714 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 DHX58Q96C10 678 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 FAM161BQ96MY7 647 aa14.99□□□□□ -0.01
SHMT2-228ENST00000557302 CCDC113Q9H0I3 377 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms