RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 SHBGP04278 402 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 TMEM253P0C7T8 217 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 RARGP13631 454 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 FERP16591 822 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 ATP2A2P16615 1042 aaKnown RBP13.55□□□□□ -0.24
APEX1-216ENST00000557159 EPS15P42566 896 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 TXKP42681 527 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 MSH2P43246 934 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 ATP11AP98196 1134 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 MAPK7Q13164 816 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 ACVR2BQ13705 512 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 TCEAL1Q15170 157 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 DCAF8Q5TAQ9 597 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 AP1ARQ63HQ0 302 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 DAAM2Q86T65 1068 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 NIM1KQ8IY84 436 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 NEDD1Q8NHV4 660 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 SLC30A5Q8TAD4 765 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 SNX29Q8TEQ0 813 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 KLHL29Q96CT2 875 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 PRMT1Q99873 361 aaKnown RBP13.55□□□□□ -0.24
APEX1-216ENST00000557159 SELENOSQ9BQE4 189 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 CELF4Q9BZC1 486 aaKnown RBP13.55□□□□□ -0.24
APEX1-216ENST00000557159 PRKAG3Q9UGI9 489 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 KLRF2D3W0D1 207 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 IGF2BP3O00425 579 aaKnown RBP eCLIP13.55□□□□□ -0.24
APEX1-216ENST00000557159 ATP5HO75947 161 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 AFPP02771 609 aaKnown RBP13.55□□□□□ -0.24
APEX1-216ENST00000557159 VIMP08670 466 aaKnown RBP13.55□□□□□ -0.24
APEX1-216ENST00000557159 RASA1P20936 1047 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 ATP5DP30049 168 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 CHRNA3P32297 505 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 INHBEP58166 350 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 KCNJ2P63252 427 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 MAP2K1Q02750 393 aaPredicted RBP13.55□□□□□ -0.24
APEX1-216ENST00000557159 PLS1Q14651 629 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 PARP6Q2NL67 630 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 ZNF568Q3ZCX4 644 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 ANKRD20A2Q5SQ80 823 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 ANKRD20A1Q5TYW2 823 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 ANKRD20A3Q5VUR7 823 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 RNF43Q68DV7 783 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 GRAMD1AQ96CP6 724 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 RAB3IPQ96QF0 476 aaPredicted RBP13.55□□□□□ -0.24
APEX1-216ENST00000557159 TRIM7Q9C029 511 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 DPH5Q9H2P9 285 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 LRRC4CQ9HCJ2 640 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 KCNQ5Q9NR82 932 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 RPTORQ8N122 1335 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 CDK5RAP2Q96SN8 1893 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 IBSPP21815 317 aaPredicted RBP13.54□□□□□ -0.24
APEX1-216ENST00000557159 PON1P27169 355 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 CDK8P49336 464 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 ARID5AQ03989 594 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 ADAM9Q13443 819 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 SLC29A2Q14542 456 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 RBBP5Q15291 538 aaKnown RBP13.54□□□□□ -0.24
APEX1-216ENST00000557159 LRRC41Q15345 812 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 EXOC3L4Q17RC7 722 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 FAM133BQ5BKY9 247 aaKnown RBP13.54□□□□□ -0.24
APEX1-216ENST00000557159 C9orf131Q5VYM1 1079 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 JAMLQ86YT9 394 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 MAPKAPK5Q8IW41 473 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 GLIS3Q8NEA6 775 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 DYNLL2Q96FJ2 89 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 TRIM51Q9BSJ1 452 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 AZI2Q9H6S1 392 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 METTL14Q9HCE5 456 aaKnown RBP13.54□□□□□ -0.24
APEX1-216ENST00000557159 GRHL1Q9NZI5 618 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 RNF181Q9P0P0 153 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 HDAC9Q9UKV0 1011 aa13.54□□□□□ -0.24
APEX1-216ENST00000557159 SYNGAP1Q96PV0 1343 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 SPDYE3A6NKU9 549 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 DDX3XO00571 662 aaKnown RBP eCLIP13.53□□□□□ -0.243e-15■■□□□ 13.4
APEX1-216ENST00000557159 SLC16A3O15427 465 aaKnown RBP13.53□□□□□ -0.24
APEX1-216ENST00000557159 PHF2O75151 1096 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 ECM2O94769 699 aaPredicted RBP13.53□□□□□ -0.24
APEX1-216ENST00000557159 ALAS1P13196 640 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 PTGIRP43119 386 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 NOVP48745 357 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 RHBDL3P58872 404 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 AUHQ13825 339 aaKnown RBP13.53□□□□□ -0.24
APEX1-216ENST00000557159 SGSM1Q2NKQ1 1148 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 SPDYAQ5MJ70 313 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 TRMT10CQ7L0Y3 403 aaKnown RBP13.53□□□□□ -0.24
APEX1-216ENST00000557159 CYFIP1Q7L576 1253 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 RBM46Q8TBY0 533 aaKnown RBP13.53□□□□□ -0.24
APEX1-216ENST00000557159 SCFD1Q8WVM8 642 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 SERPINB12Q96P63 405 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 NAP1L4Q99733 375 aaKnown RBP13.53□□□□□ -0.24
APEX1-216ENST00000557159 TMEM47Q9BQJ4 181 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 KIF9Q9HAQ2 790 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 ADAM22Q9P0K1 906 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 ZFATQ9P243 1243 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 SEC63Q9UGP8 760 aaKnown RBP13.53□□□□□ -0.24
APEX1-216ENST00000557159 PCDHA3Q9Y5H8 950 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 CEP350Q5VT06 3117 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 DICER1Q9UPY3 1922 aaKnown RBP13.53□□□□□ -0.24
APEX1-216ENST00000557159 MYO3BQ8WXR4 1341 aa13.53□□□□□ -0.24
APEX1-216ENST00000557159 SCN9AQ15858 1988 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms