RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 TCRBV7S2A1N4TA0A589 114 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 PPIP5K2O43314 1243 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 HLA-DOAP06340 250 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 VIMP08670 466 aaKnown RBP12.31□□□□□ -0.44
SRP54-213ENST00000556994 NUDT17P0C025 328 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 PTGIRP43119 386 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 AP3B2Q13367 1082 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 XRCC4Q13426 336 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 NEDD9Q14511 834 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 FAM133BQ5BKY9 247 aaKnown RBP12.31□□□□□ -0.44
SRP54-213ENST00000556994 MSL1Q68DK7 614 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 TTC27Q6P3X3 843 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 PRELID2Q8N945 189 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 HOOK2Q96ED9 719 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 RBM17Q96I25 401 aaKnown RBP12.31□□□□□ -0.44
SRP54-213ENST00000556994 DYDC2Q96IM9 177 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 OLFML3Q9NRN5 406 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 INTS9Q9NV88 658 aaKnown RBP12.31□□□□□ -0.44
SRP54-213ENST00000556994 APEX2Q9UBZ4 518 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 ODF2LQ9ULJ1 636 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 ANKRD62A6NC57 917 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 ANKRD63C9JTQ0 380 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 ATMINO43313 823 aaPredicted RBP12.3□□□□□ -0.44
SRP54-213ENST00000556994 SLC26A4O43511 780 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 SLITRK3O94933 977 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 FTLP02792 175 aaPredicted RBP12.3□□□□□ -0.44
SRP54-213ENST00000556994 KCNJ1P48048 391 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 UBXN2AP68543 259 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 MESDQ14696 234 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 NBPF9Q3BBW0 867 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 WLSQ5T9L3 541 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 MOXD1Q6UVY6 613 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 CCDC25Q86WR0 208 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 FBXO11Q86XK2 927 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 BANK1Q8NDB2 785 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 N4BP2L2Q92802 583 aaPredicted RBP12.3□□□□□ -0.44
SRP54-213ENST00000556994 CENPTQ96BT3 561 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 FAM20AQ96MK3 541 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 NAP1L3Q99457 506 aaPredicted RBP12.3□□□□□ -0.44
SRP54-213ENST00000556994 AMNQ9BXJ7 453 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 BAIAP2L1Q9UHR4 511 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 SMCHD1A6NHR9 2005 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 FOCADQ5VW36 1801 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 ATP8B3O60423 1300 aa12.3□□□□□ -0.44
SRP54-213ENST00000556994 FAM187AA6NFU0 413 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 CCDC169A6NNP5 214 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 TBX3O15119 743 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 GDF11O95390 407 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 SREBF1P36956 1147 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 DLG4P78352 724 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 ELF3P78545 371 aaPredicted RBP12.29□□□□□ -0.44
SRP54-213ENST00000556994 DHX34Q14147 1143 aaKnown RBP12.29□□□□□ -0.44
SRP54-213ENST00000556994 LRRC14Q15048 493 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 CCDC137Q6PK04 289 aaKnown RBP12.29□□□□□ -0.44
SRP54-213ENST00000556994 MAEAQ7L5Y9 396 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 SIAH1Q8IUQ4 282 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 MGARPQ8TDB4 240 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 TCP11Q8WWU5 503 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 PGM2Q96G03 612 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 BTBD6Q96KE9 485 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 POP1Q99575 1024 aaKnown RBP12.29□□□□□ -0.44
SRP54-213ENST00000556994 AGPAT1Q99943 283 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 UBE2TQ9NPD8 197 aaPredicted RBP12.29□□□□□ -0.44
SRP54-213ENST00000556994 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.29□□□□□ -0.44
SRP54-213ENST00000556994 DIS3Q9Y2L1 958 aaKnown RBP12.29□□□□□ -0.44
SRP54-213ENST00000556994 FRMD4BQ9Y2L6 1034 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 CD2APQ9Y5K6 639 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 FOXO6A8MYZ6 492 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 TISP43B9A030 160 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 PHF2O75151 1096 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 SERPINB2P05120 415 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 NF2P35240 595 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 MYL7Q01449 175 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 CRY2Q49AN0 593 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 C1orf186Q6ZWK4 172 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 TBC1D1Q86TI0 1168 aaPredicted RBP12.29□□□□□ -0.44
SRP54-213ENST00000556994 ANKS4BQ8N8V4 417 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 PCIF1Q9H4Z3 704 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 PARVGQ9HBI0 331 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 ACP6Q9NPH0 428 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 AGPAT3Q9NRZ7 376 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 RASAL2Q9UJF2 1139 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 TRPC6Q9Y210 931 aa12.29□□□□□ -0.44
SRP54-213ENST00000556994 FRMPD4Q14CM0 1322 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 DDTLA6NHG4 134 aaPredicted RBP12.28□□□□□ -0.44
SRP54-213ENST00000556994 F5H6K3 240 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 MGRN1O60291 552 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 EXOC3O60645 756 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 DNAJC8O75937 253 aaPredicted RBP12.28□□□□□ -0.44
SRP54-213ENST00000556994 RPSAP08865 295 aaKnown RBP12.28□□□□□ -0.44
SRP54-213ENST00000556994 CLTAP09496 248 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 PYGMP11217 842 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 GAP43P17677 238 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 COMTP21964 271 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 CERKLQ49MI3 558 aaPredicted RBP12.28□□□□□ -0.44
SRP54-213ENST00000556994 SPDYCQ5MJ68 293 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 ODR4Q5SWX8 454 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 APOBEC3HQ6NTF7 200 aaKnown RBP12.28□□□□□ -0.44
SRP54-213ENST00000556994 OTUD6AQ7L8S5 288 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 HS2ST1Q7LGA3 356 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms