RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 URGCPQ8TCY9 931 aa15.72■□□□□ 0.11
ACTN1-219ENST00000556432 CNTNAP3BQ96NU0 1288 aa15.72■□□□□ 0.11
ACTN1-219ENST00000556432 VN1R3Q9BXE9 311 aa15.72■□□□□ 0.11
ACTN1-219ENST00000556432 CNTNAP3Q9BZ76 1288 aa15.72■□□□□ 0.11
ACTN1-219ENST00000556432 CHST12Q9NRB3 414 aa15.72■□□□□ 0.11
ACTN1-219ENST00000556432 RBM28Q9NW13 759 aaKnown RBP15.72■□□□□ 0.11
ACTN1-219ENST00000556432 BARHL2Q9NY43 387 aa15.72■□□□□ 0.11
ACTN1-219ENST00000556432 STK39Q9UEW8 545 aa15.72■□□□□ 0.11
ACTN1-219ENST00000556432 SIT1Q9Y3P8 196 aa15.72■□□□□ 0.11
ACTN1-219ENST00000556432 SPTBN2O15020 2390 aa15.72■□□□□ 0.11
ACTN1-219ENST00000556432 CLUHO75153 1309 aa15.71■□□□□ 0.11
ACTN1-219ENST00000556432 WDR64B1ANS9 1081 aa15.71■□□□□ 0.11
ACTN1-219ENST00000556432 hCG_1984214I3L0E3 225 aa15.71■□□□□ 0.11
ACTN1-219ENST00000556432 CHMP2AO43633 222 aa15.71■□□□□ 0.11
ACTN1-219ENST00000556432 URODP06132 367 aa15.71■□□□□ 0.11
ACTN1-219ENST00000556432 SRFP11831 508 aa15.71■□□□□ 0.11
ACTN1-219ENST00000556432 AK2P54819 239 aa15.71■□□□□ 0.11
ACTN1-219ENST00000556432 COL9A3Q14050 684 aaPredicted RBP15.71■□□□□ 0.11
ACTN1-219ENST00000556432 RTN1Q16799 776 aa15.71■□□□□ 0.11
ACTN1-219ENST00000556432 RSPO4Q2I0M5 234 aaPredicted RBP15.71■□□□□ 0.11
ACTN1-219ENST00000556432 C1orf210Q8IVY1 113 aa15.71■□□□□ 0.11
ACTN1-219ENST00000556432 SLC44A3Q8N4M1 653 aa15.71■□□□□ 0.11
ACTN1-219ENST00000556432 ZNF713Q8N859 430 aaPredicted RBP15.71■□□□□ 0.11
ACTN1-219ENST00000556432 GPR152Q8TDT2 470 aa15.71■□□□□ 0.11
ACTN1-219ENST00000556432 FAM193BQ96PV7 902 aaPredicted RBP15.71■□□□□ 0.11
ACTN1-219ENST00000556432 ARHGEF3Q9NR81 526 aa15.71■□□□□ 0.11
ACTN1-219ENST00000556432 FAM105AQ9NUU6 356 aa15.71■□□□□ 0.11
ACTN1-219ENST00000556432 C2orf16Q68DN1 1984 aa15.71■□□□□ 0.1
ACTN1-219ENST00000556432 ACACBO00763 2458 aa15.7■□□□□ 0.1
ACTN1-219ENST00000556432 CCDC195A0A1B0GUA6 201 aa15.7■□□□□ 0.1
ACTN1-219ENST00000556432 MEIS3P2A8K0S8 358 aa15.7■□□□□ 0.1
ACTN1-219ENST00000556432 INPPL1O15357 1258 aa15.7■□□□□ 0.1
ACTN1-219ENST00000556432 CLK2P49760 499 aaKnown RBP15.7■□□□□ 0.1
ACTN1-219ENST00000556432 DNM2P50570 870 aa15.7■□□□□ 0.1
ACTN1-219ENST00000556432 RAB27AP51159 221 aa15.7■□□□□ 0.1
ACTN1-219ENST00000556432 CATSPER4Q7RTX7 472 aa15.7■□□□□ 0.1
ACTN1-219ENST00000556432 SMG7Q92540 1137 aaKnown RBP15.7■□□□□ 0.1
ACTN1-219ENST00000556432 MYADMQ96S97 322 aa15.7■□□□□ 0.1
ACTN1-219ENST00000556432 PIDD1Q9HB75 910 aa15.7■□□□□ 0.1
ACTN1-219ENST00000556432 WDR6Q9NNW5 1121 aaKnown RBP15.7■□□□□ 0.1
ACTN1-219ENST00000556432 DISC1Q9NRI5 854 aa15.7■□□□□ 0.1
ACTN1-219ENST00000556432 NCDNQ9UBB6 729 aa15.7■□□□□ 0.1
ACTN1-219ENST00000556432 GPR179Q6PRD1 2367 aa15.7■□□□□ 0.1
ACTN1-219ENST00000556432 DNAH14Q0VDD8 3507 aa15.69■□□□□ 0.1
ACTN1-219ENST00000556432 ZNF862O60290 1169 aa15.69■□□□□ 0.1
ACTN1-219ENST00000556432 KINO60870 393 aaKnown RBP15.69■□□□□ 0.1
ACTN1-219ENST00000556432 OFD1O75665 1012 aa15.69■□□□□ 0.1
ACTN1-219ENST00000556432 GLUD1P00367 558 aa15.69■□□□□ 0.1
ACTN1-219ENST00000556432 ADH1AP07327 375 aa15.69■□□□□ 0.1
ACTN1-219ENST00000556432 CYP3A4P08684 503 aa15.69■□□□□ 0.1
ACTN1-219ENST00000556432 DRP2Q13474 957 aa15.69■□□□□ 0.1
ACTN1-219ENST00000556432 APOA5Q6Q788 366 aa15.69■□□□□ 0.1
ACTN1-219ENST00000556432 SGMS1Q86VZ5 419 aa15.69■□□□□ 0.1
ACTN1-219ENST00000556432 ZNF280BQ86YH2 543 aa15.69■□□□□ 0.1
ACTN1-219ENST00000556432 CMASQ8NFW8 434 aaPredicted RBP15.69■□□□□ 0.1
ACTN1-219ENST00000556432 PGBD4Q96DM1 585 aa15.69■□□□□ 0.1
ACTN1-219ENST00000556432 DLL3Q9NYJ7 618 aa15.69■□□□□ 0.1
ACTN1-219ENST00000556432 EPS15L1Q9UBC2 864 aa15.69■□□□□ 0.1
ACTN1-219ENST00000556432 SEPT9Q9UHD8 586 aaPredicted RBP15.69■□□□□ 0.1
ACTN1-219ENST00000556432 DPP7Q9UHL4 492 aa15.69■□□□□ 0.1
ACTN1-219ENST00000556432 NAP1L2Q9ULW6 460 aaPredicted RBP15.69■□□□□ 0.1
ACTN1-219ENST00000556432 FAN1Q9Y2M0 1017 aa15.69■□□□□ 0.1
ACTN1-219ENST00000556432 A0A087WZ62 844 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 GOLGA8AA7E2F4 631 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 GOLGA8BA8MQT2 603 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 SLC27A2O14975 620 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 ZBTB43O43298 467 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 B4GALT3O60512 393 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 RFPL2O75678 378 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 ALDH2P05091 517 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 CDC42EP1Q00587 391 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 UGCGQ16739 394 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 MTERF2Q49AM1 385 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 PHLDB3Q6NSJ2 640 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 DCLRE1AQ6PJP8 1040 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 GET4Q7L5D6 327 aaPredicted RBP15.68■□□□□ 0.1
ACTN1-219ENST00000556432 RHPN2Q8IUC4 686 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 REXO1Q8N1G1 1221 aaKnown RBP15.68■□□□□ 0.1
ACTN1-219ENST00000556432 NXPE3Q969Y0 559 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 NLRP4Q96MN2 994 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 FDXACB1Q9BRP7 624 aaPredicted RBP15.68■□□□□ 0.1
ACTN1-219ENST00000556432 TRAIPQ9BWF2 469 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 FOXQ1Q9C009 403 aa15.68■□□□□ 0.1
ACTN1-219ENST00000556432 INO80BQ9C086 356 aaPredicted RBP15.68■□□□□ 0.1
ACTN1-219ENST00000556432 GAS7O60861 476 aa15.67■□□□□ 0.1
ACTN1-219ENST00000556432 SPATA31D3P0C874 917 aa15.67■□□□□ 0.1
ACTN1-219ENST00000556432 SPATA31D4Q6ZUB0 917 aa15.67■□□□□ 0.1
ACTN1-219ENST00000556432 ST13P5Q8NFI4 369 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-219ENST00000556432 EXOC6Q8TAG9 804 aa15.67■□□□□ 0.1
ACTN1-219ENST00000556432 PHKBQ93100 1093 aa15.67■□□□□ 0.1
ACTN1-219ENST00000556432 SSX2IPQ9Y2D8 614 aa15.67■□□□□ 0.1
ACTN1-219ENST00000556432 PRG3Q9Y2Y8 225 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-219ENST00000556432 PCDHB2Q9Y5E7 798 aa15.67■□□□□ 0.1
ACTN1-219ENST00000556432 TEX28O15482 410 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 LILRB3O75022 631 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 DDHD2O94830 711 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 POMCP01189 267 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 JAK3P52333 1124 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 FUT2Q10981 343 aa15.66■□□□□ 0.1
ACTN1-219ENST00000556432 CREB3L3Q68CJ9 461 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms