RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 RLFQ13129 1914 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 ATP2A1O14983 1001 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 ZBED4O75132 1171 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 LEFTY1O75610 366 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 SURF6O75683 361 aaKnown RBP5.78□□□□□ -1.48
ATXN3-239ENST00000556315 RNASE1P07998 156 aaKnown RBP5.78□□□□□ -1.48
ATXN3-239ENST00000556315 EEF2P13639 858 aaKnown RBP5.78□□□□□ -1.48
ATXN3-239ENST00000556315 AKR1B1P15121 316 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 OXCT1P55809 520 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 ATP8B2P98198 1209 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 BEX3Q00994 111 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 TAP1Q03518 808 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 ZNF252P-AS1Q0IIN9 211 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 GRB10Q13322 594 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 FSCN1Q16658 493 aaKnown RBP5.78□□□□□ -1.48
ATXN3-239ENST00000556315 IFI16Q16666 785 aaKnown RBP5.78□□□□□ -1.48
ATXN3-239ENST00000556315 ZC3H12AQ5D1E8 599 aaKnown RBP5.78□□□□□ -1.48
ATXN3-239ENST00000556315 KRT40Q6A162 431 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 SNRNP48Q6IEG0 339 aaKnown RBP5.78□□□□□ -1.48
ATXN3-239ENST00000556315 ARMCX2Q7L311 632 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 NT5DC4Q86YG4 428 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 FAM178BQ8IXR5 827 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 ANKRD35Q8N283 1001 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 PRPF38AQ8NAV1 312 aaKnown RBP5.78□□□□□ -1.48
ATXN3-239ENST00000556315 STK35Q8TDR2 534 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 VWCEQ96DN2 955 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 DYNLL2Q96FJ2 89 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 UIMC1Q96RL1 719 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 SLC9A7Q96T83 725 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 SLF1Q9BQI6 1058 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 AP5M1Q9H0R1 490 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 CCDC8Q9H0W5 538 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-239ENST00000556315 WNT8AQ9H1J5 351 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 ANTXR1Q9H6X2 564 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 DCP1AQ9NPI6 582 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-239ENST00000556315 KBTBD4Q9NVX7 518 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 FBXO40Q9UH90 709 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 DBNLQ9UJU6 430 aaKnown RBP5.78□□□□□ -1.48
ATXN3-239ENST00000556315 ADAMTS6Q9UKP5 1117 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 Q9Y3F1 56 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 RIPK3Q9Y572 518 aa5.78□□□□□ -1.48
ATXN3-239ENST00000556315 CTDP1Q9Y5B0 961 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-239ENST00000556315 GRIN2DO15399 1336 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-239ENST00000556315 EPOPA6NHQ4 379 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 ASB14A6NK59 587 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 IPO8O15397 1037 aaKnown RBP5.77□□□□□ -1.49
ATXN3-239ENST00000556315 ADCY6O43306 1168 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 B4GALT4O60513 344 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 CYP2D6P10635 497 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 ERCC5P28715 1186 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-239ENST00000556315 RFC2P35250 354 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 CDK8P49336 464 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 NHLH1Q02575 133 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 LMNB2Q03252 620 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 TTF1Q15361 905 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-239ENST00000556315 LEXMQ3ZCV2 418 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 FAM83BQ5T0W9 1011 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 SLC9C2Q5TAH2 1124 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 IQSEC1Q6DN90 963 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 HERC6Q8IVU3 1022 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 AMOTL1Q8IY63 956 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 CCDC144CPQ8IYA2 1237 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 TRMT2AQ8IZ69 625 aaKnown RBP5.77□□□□□ -1.49
ATXN3-239ENST00000556315 CPXCR1Q8N123 301 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 PHC3Q8NDX5 983 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 CHST13Q8NET6 341 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 SSH3Q8TE77 659 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 EAF2Q96CJ1 260 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-239ENST00000556315 SCLYQ96I15 445 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 KATNBL1Q9H079 304 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 MIR1-1HGQ9H1L0 117 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 ALDH8A1Q9H2A2 487 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-239ENST00000556315 RC3H2Q9HBD1 1191 aaKnown RBP5.77□□□□□ -1.49
ATXN3-239ENST00000556315 ATP8A2Q9NTI2 1148 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 CACNA2D2Q9NY47 1150 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 PLAGL2Q9UPG8 496 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 NOP58Q9Y2X3 529 aaKnown RBP5.77□□□□□ -1.49
ATXN3-239ENST00000556315 DNAH12Q6ZR08 3092 aa5.77□□□□□ -1.49
ATXN3-239ENST00000556315 NCOR1O75376 2440 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 PIEZO1Q92508 2521 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-239ENST00000556315 MINDY4BA8MYZ0 360 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 F5H6K3 240 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 LPXNO60711 386 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 RNGTTO60942 597 aaKnown RBP5.76□□□□□ -1.49
ATXN3-239ENST00000556315 CEACAM5P06731 702 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 PDE6AP16499 860 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 CD96P40200 585 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 RARSP54136 660 aaKnown RBP5.76□□□□□ -1.49
ATXN3-239ENST00000556315 OAZ1P54368 228 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 KLRC3Q07444 240 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 ZNF648Q5T619 568 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-239ENST00000556315 C12orf60Q5U649 245 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 FAM214BQ7L5A3 538 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 DEFB128Q7Z7B8 93 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 TLK2Q86UE8 772 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 ZNF654Q8IZM8 581 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 RNF214Q8ND24 703 aa5.76□□□□□ -1.49
ATXN3-239ENST00000556315 GRIN3AQ8TCU5 1115 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms